Protein–RNA interactions for Protein: P39981

AVT2, Vacuolar amino acid transporter 2, yeastyeast

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
AVT2P39981 YML009W-BYML009W-B 477 nt21.39■■□□□ 1.01
AVT2P39981 NSR1YGR159C 1245 nt21.21■□□□□ 0.99
AVT2P39981 NOP1YDL014W 984 nt20.87■□□□□ 0.93
AVT2P39981 YKL036CYKL036C 393 nt19.46■□□□□ 0.71
AVT2P39981 MDJ1YFL016C 1536 nt18.85■□□□□ 0.61
AVT2P39981 Q0297Q0297 156 nt18.36■□□□□ 0.53
AVT2P39981 SRX1YKL086W 384 nt18.25■□□□□ 0.51
AVT2P39981 YJL027CYJL027C 417 nt18.2■□□□□ 0.5
AVT2P39981 SCS3YGL126W 1143 nt17.81■□□□□ 0.44
AVT2P39981 YCR051WYCR051W 669 nt17.32■□□□□ 0.36
AVT2P39981 YOL085CYOL085C 342 nt16.86■□□□□ 0.29
AVT2P39981 DBP2YNL112W 1641 nt16.74■□□□□ 0.27
AVT2P39981 PKP1YIL042C 1185 nt16.57■□□□□ 0.24
AVT2P39981 RPP1BYDL130W 321 nt16.47■□□□□ 0.23
AVT2P39981 TRN1tP(UGG)A 72 nt16.42■□□□□ 0.22
AVT2P39981 SUF9tP(UGG)F 72 nt16.42■□□□□ 0.22
AVT2P39981 SUF8tP(UGG)H 72 nt16.42■□□□□ 0.22
AVT2P39981 tP(UGG)LtP(UGG)L 72 nt16.42■□□□□ 0.22
AVT2P39981 SUF7tP(UGG)M 72 nt16.42■□□□□ 0.22
AVT2P39981 tP(UGG)N1tP(UGG)N1 72 nt16.42■□□□□ 0.22
AVT2P39981 tP(UGG)N2tP(UGG)N2 72 nt16.42■□□□□ 0.22
AVT2P39981 tP(UGG)O1tP(UGG)O1 72 nt16.42■□□□□ 0.22
AVT2P39981 SUF11tP(UGG)O2 72 nt16.42■□□□□ 0.22
AVT2P39981 CCC1YLR220W 969 nt16.22■□□□□ 0.19
AVT2P39981 YBR190WYBR190W 312 nt16.05■□□□□ 0.16
AVT2P39981 SCJ1YMR214W 1134 nt16.03■□□□□ 0.16
AVT2P39981 ATS1YAL020C 1002 nt15.99■□□□□ 0.15
AVT2P39981 PET122YER153C 765 nt15.71■□□□□ 0.11
AVT2P39981 RTC3YHR087W 336 nt15.65■□□□□ 0.1
AVT2P39981 RVS167YDR388W 1449 nt15.6■□□□□ 0.09
AVT2P39981 SCR1SCR1 522 nt15.59■□□□□ 0.09
AVT2P39981 tP(UGG)O3tP(UGG)O3 72 nt15.57■□□□□ 0.08
AVT2P39981 RRN5YLR141W 1092 nt15.29■□□□□ 0.04
AVT2P39981 SHR5YOL110W 714 nt15.11■□□□□ 0.01
AVT2P39981 YDJ1YNL064C 1230 nt15.06■□□□□ 0
AVT2P39981 RSB1YOR049C 1065 nt15.02■□□□□ -0
AVT2P39981 YER088W-BYER088W-B 147 nt14.99□□□□□ -0.01
AVT2P39981 PST2YDR032C 597 nt14.78□□□□□ -0.04
AVT2P39981 GAR1YHR089C 618 nt14.69□□□□□ -0.06
AVT2P39981 DEP1YAL013W 1218 nt14.69□□□□□ -0.06
AVT2P39981 URN1YPR152C 1398 nt14.69□□□□□ -0.06
AVT2P39981 PUT4YOR348C 1884 nt14.62□□□□□ -0.07
AVT2P39981 OPI9YLR338W 858 nt14.48□□□□□ -0.09
AVT2P39981 YNL208WYNL208W 600 nt14.44□□□□□ -0.1
AVT2P39981 RPN10YHR200W 807 nt14.41□□□□□ -0.1
AVT2P39981 SAH1YER043C 1350 nt14.4□□□□□ -0.1
AVT2P39981 ARE1YCR048W 1833 nt14.36□□□□□ -0.11
AVT2P39981 YKL097CYKL097C 411 nt14.29□□□□□ -0.12
AVT2P39981 SSA3YBL075C 1950 nt14.18□□□□□ -0.14
AVT2P39981 TIR1YER011W 765 nt14.18□□□□□ -0.14
AVT2P39981 SHU1YHL006C 453 nt14.13□□□□□ -0.15
AVT2P39981 YHR049C-AYHR049C-A 297 nt14.13□□□□□ -0.15
AVT2P39981 POA1YBR022W 534 nt14.13□□□□□ -0.15
AVT2P39981 SSA1YAL005C 1929 nt14.05□□□□□ -0.16
AVT2P39981 PUN1YLR414C 792 nt14.03□□□□□ -0.16
AVT2P39981 YJR018WYJR018W 363 nt14□□□□□ -0.17
AVT2P39981 YJR120WYJR120W 351 nt13.89□□□□□ -0.19
AVT2P39981 PTC2YER089C 1395 nt13.88□□□□□ -0.19
AVT2P39981 SRB2YHR041C 633 nt13.88□□□□□ -0.19
AVT2P39981 YAL037C-BYAL037C-B 975 nt13.85□□□□□ -0.19
AVT2P39981 BSC6YOL137W 1494 nt13.82□□□□□ -0.2
AVT2P39981 BUD23YCR047C 828 nt13.77□□□□□ -0.21
AVT2P39981 YOR139CYOR139C 393 nt13.69□□□□□ -0.22
AVT2P39981 NAB2YGL122C 1578 nt13.69□□□□□ -0.22
AVT2P39981 RPP2BYDR382W 333 nt13.67□□□□□ -0.22
AVT2P39981 WWM1YFL010C 636 nt13.6□□□□□ -0.23
AVT2P39981 YGR021WYGR021W 873 nt13.57□□□□□ -0.24
AVT2P39981 FIS1YIL065C 468 nt13.55□□□□□ -0.24
AVT2P39981 HOM6YJR139C 1080 nt13.55□□□□□ -0.24
AVT2P39981 NPL3YDR432W 1245 nt13.53□□□□□ -0.24
AVT2P39981 DAL1YIR027C 1383 nt13.52□□□□□ -0.25
AVT2P39981 MNP1YGL068W 585 nt13.5□□□□□ -0.25
AVT2P39981 INM2YDR287W 879 nt13.49□□□□□ -0.25
AVT2P39981 BDH2YAL061W 1254 nt13.46□□□□□ -0.25
AVT2P39981 FPR4YLR449W 1179 nt13.45□□□□□ -0.26
AVT2P39981 PHO4YFR034C 939 nt13.41□□□□□ -0.26
AVT2P39981 YBL100CYBL100C 315 nt13.38□□□□□ -0.27
AVT2P39981 YFL021C-AYFL021C-A 855 nt13.37□□□□□ -0.27
AVT2P39981 YOL037CYOL037C 354 nt13.35□□□□□ -0.27
AVT2P39981 RKM5YLR137W 1104 nt13.34□□□□□ -0.27
AVT2P39981 LSM3YLR438C-A 270 nt13.28□□□□□ -0.28
AVT2P39981 SPT5YML010W 3192 nt13.27□□□□□ -0.28
AVT2P39981 FUN26YAL022C 1554 nt13.24□□□□□ -0.29
AVT2P39981 TRM9YML014W 840 nt13.18□□□□□ -0.3
AVT2P39981 YPS1YLR120C 1710 nt13.16□□□□□ -0.3
AVT2P39981 tM(CAU)CtM(CAU)C 72 nt13.15□□□□□ -0.3
AVT2P39981 IMT4tM(CAU)E 72 nt13.15□□□□□ -0.3
AVT2P39981 IMT3tM(CAU)J3 72 nt13.15□□□□□ -0.3
AVT2P39981 IMT1tM(CAU)O1 72 nt13.15□□□□□ -0.3
AVT2P39981 IMT2tM(CAU)P 72 nt13.15□□□□□ -0.3
AVT2P39981 CCT6YDR188W 1641 nt13.09□□□□□ -0.31
AVT2P39981 YDR095CYDR095C 411 nt13.07□□□□□ -0.32
AVT2P39981 YLR281CYLR281C 468 nt13.05□□□□□ -0.32
AVT2P39981 PUS2YGL063W 1113 nt12.99□□□□□ -0.33
AVT2P39981 ALF1YNL148C 765 nt12.98□□□□□ -0.33
AVT2P39981 MEP2YNL142W 1500 nt12.98□□□□□ -0.33
AVT2P39981 WHI5YOR083W 888 nt12.97□□□□□ -0.33
AVT2P39981 YHR165W-AYHR165W-A 312 nt12.96□□□□□ -0.33
AVT2P39981 SUF2tP(AGG)C 72 nt12.91□□□□□ -0.34
AVT2P39981 SUF10tP(AGG)N 72 nt12.91□□□□□ -0.34
Retrieved 100 of 7,029 protein–RNA pairs in 13.5 ms