RNA–Protein interactions for RNA: YLR132C

USB1, Transcript of Putative phosphodiesterase specific for U6 snRNA 3' end modification, yeastyeast

Gene USB1, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USB1YLR132C MTC1P47018 478 aaKnown RBP15.86■□□□□ 0.13
USB1YLR132C DRS1P32892 752 aaKnown RBP15.02■□□□□ -0
USB1YLR132C FAP1P53971 965 aa14.01□□□□□ -0.17
USB1YLR132C PRI1P10363 409 aa13.25□□□□□ -0.29
USB1YLR132C PRY3P47033 881 aa13.18□□□□□ -0.3
USB1YLR132C AAD16Q02895 342 aa13.13□□□□□ -0.31
USB1YLR132C DIP2Q12220 943 aaPredicted RBP13.09□□□□□ -0.31
USB1YLR132C ISW2Q08773 1120 aa13.08□□□□□ -0.32
USB1YLR132C RPG1P38249 964 aaKnown RBP12.95□□□□□ -0.34
USB1YLR132C AVT3P36062 692 aa12.69□□□□□ -0.38
USB1YLR132C RSE1Q04693 1361 aaKnown RBP12.59□□□□□ -0.39
USB1YLR132C BFR2Q06631 534 aaKnown RBP12.58□□□□□ -0.4
USB1YLR132C TSR3Q12094 313 aaKnown RBP12.54□□□□□ -0.4
USB1YLR132C YCK3P39962 524 aa12.51□□□□□ -0.41
USB1YLR132C HAA1Q12753 694 aaKnown RBP12.37□□□□□ -0.43
USB1YLR132C RPL17AP05740 184 aaKnown RBP12.19□□□□□ -0.46
USB1YLR132C RPL17BP46990 184 aaKnown RBP12.19□□□□□ -0.46
USB1YLR132C REB1P21538 810 aa12.09□□□□□ -0.47
USB1YLR132C MRPL32P25348 183 aa12.02□□□□□ -0.49
USB1YLR132C SPT21P35209 758 aa11.7□□□□□ -0.54
USB1YLR132C YKR023WP36119 530 aaKnown RBP11.53□□□□□ -0.56
USB1YLR132C CDC27P38042 758 aa11.51□□□□□ -0.57
USB1YLR132C YGL015CP33199 130 aa11.47□□□□□ -0.57
USB1YLR132C RIM101P33400 625 aa11.33□□□□□ -0.6
USB1YLR132C HOP09932 586 aa11.28□□□□□ -0.6
USB1YLR132C TFC8Q12308 588 aa11.28□□□□□ -0.6
USB1YLR132C DCD1P06773 312 aa11.23□□□□□ -0.61
USB1YLR132C TFA1P36100 482 aa11.23□□□□□ -0.61
USB1YLR132C UBP10P53874 792 aaPredicted RBP11.12□□□□□ -0.63
USB1YLR132C MAP2P38174 421 aaKnown RBP11.11□□□□□ -0.63
USB1YLR132C OXP1P28273 1286 aa10.97□□□□□ -0.65
USB1YLR132C BCH2P36122 765 aa10.92□□□□□ -0.66
USB1YLR132C SCY1P53009 804 aa10.92□□□□□ -0.66
USB1YLR132C PTP3P40048 928 aa10.76□□□□□ -0.69
USB1YLR132C SLX5P32828 619 aaKnown RBP10.75□□□□□ -0.69
USB1YLR132C YIL055CP40523 627 aaKnown RBP10.75□□□□□ -0.69
USB1YLR132C EPS1P40557 701 aa10.66□□□□□ -0.7
USB1YLR132C TIF4632P39936 914 aaKnown RBP10.65□□□□□ -0.7
USB1YLR132C YAH1Q12184 172 aaKnown RBP10.65□□□□□ -0.7
USB1YLR132C RSM7P47150 247 aa10.62□□□□□ -0.71
USB1YLR132C BDF1P35817 686 aa10.61□□□□□ -0.71
USB1YLR132C TGL3P40308 642 aa10.61□□□□□ -0.71
USB1YLR132C AI2P03876 854 aa10.51□□□□□ -0.73
USB1YLR132C YLR271WQ06152 274 aa10.5□□□□□ -0.73
USB1YLR132C BBC1P47068 1157 aa10.49□□□□□ -0.73
USB1YLR132C BUD31P25337 157 aaPredicted RBP10.44□□□□□ -0.74
USB1YLR132C SSP1P38871 571 aa10.4□□□□□ -0.74
USB1YLR132C PSD2P53037 1138 aaKnown RBP10.33□□□□□ -0.76
USB1YLR132C ARP8Q12386 881 aaKnown RBP RIP-Chip data10.3□□□□□ -0.76not detected
USB1YLR132C NSR1P27476 414 aaKnown RBP RIP-Chip data10.22□□□□□ -0.77not detected
USB1YLR132C MST1P07236 462 aa10.2□□□□□ -0.78
USB1YLR132C UBP9P39967 754 aa10.2□□□□□ -0.78
USB1YLR132C YOR238WQ08634 303 aa10.17□□□□□ -0.78
USB1YLR132C MRM1P25270 412 aa10.15□□□□□ -0.78
USB1YLR132C YAP5P40574 245 aa10.14□□□□□ -0.79
USB1YLR132C CST9Q06032 482 aa10.14□□□□□ -0.79
USB1YLR132C MGA2P40578 1113 aa10.13□□□□□ -0.79
USB1YLR132C YBL029C-AQ3E756 94 aa10.01□□□□□ -0.81
USB1YLR132C SIS1P25294 352 aaKnown RBP9.95□□□□□ -0.82
USB1YLR132C PIB1Q06651 286 aa9.94□□□□□ -0.82
USB1YLR132C RTG3P38165 486 aa9.93□□□□□ -0.82
USB1YLR132C VPS29P38759 282 aa9.93□□□□□ -0.82
USB1YLR132C VNX1P42839 908 aa9.91□□□□□ -0.82
USB1YLR132C WSC3Q12215 556 aa9.9□□□□□ -0.82
USB1YLR132C RCR1P38212 213 aa9.89□□□□□ -0.83
USB1YLR132C GTT3P39996 337 aa9.89□□□□□ -0.83
USB1YLR132C YMR1P47147 688 aaKnown RBP RIP-Chip data9.88□□□□□ -0.83not detected
USB1YLR132C DBP1P24784 617 aaKnown RBP9.83□□□□□ -0.84
USB1YLR132C STS1P38637 319 aa9.82□□□□□ -0.84
USB1YLR132C YFR006WP43590 535 aa9.82□□□□□ -0.84
USB1YLR132C SPP1Q03012 353 aa9.81□□□□□ -0.84
USB1YLR132C TIF11P38912 153 aaKnown RBP9.75□□□□□ -0.85
USB1YLR132C VMA1P17255 1071 aaKnown RBP9.71□□□□□ -0.86
USB1YLR132C YOL036WQ08206 761 aa9.68□□□□□ -0.86
USB1YLR132C MSB4Q12317 492 aa9.67□□□□□ -0.86
USB1YLR132C RAM2P29703 316 aa9.65□□□□□ -0.86
USB1YLR132C SET4P42948 560 aa9.65□□□□□ -0.86
USB1YLR132C ULI1P43604 169 aa9.65□□□□□ -0.86
USB1YLR132C SAM3Q08986 587 aa9.65□□□□□ -0.86
USB1YLR132C IOC2Q12072 812 aa9.63□□□□□ -0.87
USB1YLR132C LDB19Q12502 818 aa9.6□□□□□ -0.87
USB1YLR132C EAP1P36041 632 aaKnown RBP9.59□□□□□ -0.87
USB1YLR132C FKH1P40466 484 aa9.59□□□□□ -0.87
USB1YLR132C MAK11P20484 414 aaKnown RBP9.56□□□□□ -0.88
USB1YLR132C AIR2Q12476 344 aaKnown RBP9.56□□□□□ -0.88
USB1YLR132C TRP5P00931 707 aaKnown RBP9.55□□□□□ -0.88
USB1YLR132C GYP5Q12344 894 aa9.52□□□□□ -0.89
USB1YLR132C MIF2P35201 549 aa9.48□□□□□ -0.89
USB1YLR132C EDS1P38073 919 aa9.47□□□□□ -0.89
USB1YLR132C ABP1P15891 592 aaKnown RBP9.46□□□□□ -0.9
USB1YLR132C RTG1P32607 177 aa9.46□□□□□ -0.9
USB1YLR132C COQ8P27697 501 aa9.45□□□□□ -0.9
USB1YLR132C DCW1P36091 449 aa9.44□□□□□ -0.9
USB1YLR132C YNL035CP53962 389 aaKnown RBP9.44□□□□□ -0.9
USB1YLR132C HTA1P04911 132 aaKnown RBP9.42□□□□□ -0.9
USB1YLR132C HTA2P04912 132 aa9.42□□□□□ -0.9
USB1YLR132C PTC3P34221 468 aaKnown RBP9.42□□□□□ -0.9
USB1YLR132C YJL171CP46992 396 aa9.42□□□□□ -0.9
USB1YLR132C GRE2Q12068 342 aaKnown RBP9.41□□□□□ -0.9
USB1YLR132C SEC61P32915 480 aa9.38□□□□□ -0.91
Retrieved 100 of 5,963 RNA–protein pairs in 11.2 ms