Protein–RNA interactions for Protein: Q04053

SNX41, Sorting nexin-41, yeastyeast

Predictions only

Length 625 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SNX41Q04053 YML009W-BYML009W-B 477 nt18.43■□□□□ 0.54
SNX41Q04053 NSR1YGR159C 1245 nt18.38■□□□□ 0.53
SNX41Q04053 NOP1YDL014W 984 nt17.95■□□□□ 0.46
SNX41Q04053 YKL036CYKL036C 393 nt16.56■□□□□ 0.24
SNX41Q04053 MDJ1YFL016C 1536 nt16.27■□□□□ 0.2
SNX41Q04053 Q0297Q0297 156 nt15.74■□□□□ 0.11
SNX41Q04053 SRX1YKL086W 384 nt15.7■□□□□ 0.1
SNX41Q04053 YJL027CYJL027C 417 nt15.44■□□□□ 0.06
SNX41Q04053 SCS3YGL126W 1143 nt15.06■□□□□ 0
SNX41Q04053 YCR051WYCR051W 669 nt14.86□□□□□ -0.03
SNX41Q04053 DBP2YNL112W 1641 nt14.44□□□□□ -0.1
SNX41Q04053 YOL085CYOL085C 342 nt14.36□□□□□ -0.11
SNX41Q04053 TRN1tP(UGG)A 72 nt14.19□□□□□ -0.14
SNX41Q04053 SUF9tP(UGG)F 72 nt14.19□□□□□ -0.14
SNX41Q04053 SUF8tP(UGG)H 72 nt14.19□□□□□ -0.14
SNX41Q04053 tP(UGG)LtP(UGG)L 72 nt14.19□□□□□ -0.14
SNX41Q04053 SUF7tP(UGG)M 72 nt14.19□□□□□ -0.14
SNX41Q04053 tP(UGG)N1tP(UGG)N1 72 nt14.19□□□□□ -0.14
SNX41Q04053 tP(UGG)N2tP(UGG)N2 72 nt14.19□□□□□ -0.14
SNX41Q04053 tP(UGG)O1tP(UGG)O1 72 nt14.19□□□□□ -0.14
SNX41Q04053 SUF11tP(UGG)O2 72 nt14.19□□□□□ -0.14
SNX41Q04053 PKP1YIL042C 1185 nt14.11□□□□□ -0.15
SNX41Q04053 RPP1BYDL130W 321 nt14.1□□□□□ -0.15
SNX41Q04053 CCC1YLR220W 969 nt14.01□□□□□ -0.17
SNX41Q04053 SSA3YBL075C 1950 nt13.99□□□□□ -0.17
SNX41Q04053 YBR190WYBR190W 312 nt13.91□□□□□ -0.18
SNX41Q04053 RTC3YHR087W 336 nt13.62□□□□□ -0.23
SNX41Q04053 RVS167YDR388W 1449 nt13.54□□□□□ -0.24
SNX41Q04053 ATS1YAL020C 1002 nt13.49□□□□□ -0.25
SNX41Q04053 SCJ1YMR214W 1134 nt13.47□□□□□ -0.25
SNX41Q04053 PET122YER153C 765 nt13.46□□□□□ -0.25
SNX41Q04053 tP(UGG)O3tP(UGG)O3 72 nt13.43□□□□□ -0.26
SNX41Q04053 SCR1SCR1 522 nt13.31□□□□□ -0.28
SNX41Q04053 RRN5YLR141W 1092 nt13.09□□□□□ -0.31
SNX41Q04053 SHR5YOL110W 714 nt13.09□□□□□ -0.31
SNX41Q04053 YDJ1YNL064C 1230 nt12.99□□□□□ -0.33
SNX41Q04053 YER088W-BYER088W-B 147 nt12.84□□□□□ -0.35
SNX41Q04053 RSB1YOR049C 1065 nt12.79□□□□□ -0.36
SNX41Q04053 URN1YPR152C 1398 nt12.71□□□□□ -0.37
SNX41Q04053 DEP1YAL013W 1218 nt12.69□□□□□ -0.38
SNX41Q04053 PUT4YOR348C 1884 nt12.69□□□□□ -0.38
SNX41Q04053 GAR1YHR089C 618 nt12.68□□□□□ -0.38
SNX41Q04053 OPI9YLR338W 858 nt12.55□□□□□ -0.4
SNX41Q04053 RPN10YHR200W 807 nt12.52□□□□□ -0.41
SNX41Q04053 PST2YDR032C 597 nt12.51□□□□□ -0.41
SNX41Q04053 YNL208WYNL208W 600 nt12.51□□□□□ -0.41
SNX41Q04053 SAH1YER043C 1350 nt12.46□□□□□ -0.41
SNX41Q04053 ARE1YCR048W 1833 nt12.43□□□□□ -0.42
SNX41Q04053 POA1YBR022W 534 nt12.31□□□□□ -0.44
SNX41Q04053 YHR049C-AYHR049C-A 297 nt12.29□□□□□ -0.44
SNX41Q04053 TIR1YER011W 765 nt12.27□□□□□ -0.45
SNX41Q04053 PUN1YLR414C 792 nt12.17□□□□□ -0.46
SNX41Q04053 YJR018WYJR018W 363 nt12.14□□□□□ -0.47
SNX41Q04053 SSA4YER103W 1929 nt12.13□□□□□ -0.47
SNX41Q04053 SSA1YAL005C 1929 nt12.13□□□□□ -0.47
SNX41Q04053 SPT5YML010W 3192 nt12.12□□□□□ -0.47
SNX41Q04053 BSC6YOL137W 1494 nt12.06□□□□□ -0.48
SNX41Q04053 PTC2YER089C 1395 nt12.03□□□□□ -0.48
SNX41Q04053 BUD23YCR047C 828 nt12.01□□□□□ -0.49
SNX41Q04053 SHU1YHL006C 453 nt11.98□□□□□ -0.49
SNX41Q04053 YKL097CYKL097C 411 nt11.98□□□□□ -0.49
SNX41Q04053 YJR120WYJR120W 351 nt11.96□□□□□ -0.49
SNX41Q04053 SRB2YHR041C 633 nt11.93□□□□□ -0.5
SNX41Q04053 NAB2YGL122C 1578 nt11.89□□□□□ -0.51
SNX41Q04053 RPP2BYDR382W 333 nt11.87□□□□□ -0.51
SNX41Q04053 BDF1YLR399C 2061 nt11.79□□□□□ -0.52
SNX41Q04053 YAL037C-BYAL037C-B 975 nt11.79□□□□□ -0.52
SNX41Q04053 INM2YDR287W 879 nt11.73□□□□□ -0.53
SNX41Q04053 DAL1YIR027C 1383 nt11.72□□□□□ -0.53
SNX41Q04053 WWM1YFL010C 636 nt11.72□□□□□ -0.53
SNX41Q04053 PAC11YDR488C 1602 nt11.71□□□□□ -0.53
SNX41Q04053 FPR4YLR449W 1179 nt11.71□□□□□ -0.53
SNX41Q04053 FIS1YIL065C 468 nt11.69□□□□□ -0.54
SNX41Q04053 BDH2YAL061W 1254 nt11.66□□□□□ -0.54
SNX41Q04053 YGR021WYGR021W 873 nt11.65□□□□□ -0.54
SNX41Q04053 HOM6YJR139C 1080 nt11.63□□□□□ -0.55
SNX41Q04053 PHO4YFR034C 939 nt11.6□□□□□ -0.55
SNX41Q04053 TAT1YBR069C 1860 nt11.59□□□□□ -0.55
SNX41Q04053 YBL100CYBL100C 315 nt11.58□□□□□ -0.56
SNX41Q04053 NVJ2YPR091C 2313 nt11.56□□□□□ -0.56
SNX41Q04053 YFL021C-AYFL021C-A 855 nt11.54□□□□□ -0.56
SNX41Q04053 MNP1YGL068W 585 nt11.53□□□□□ -0.56
SNX41Q04053 LSM3YLR438C-A 270 nt11.53□□□□□ -0.56
SNX41Q04053 YOR139CYOR139C 393 nt11.51□□□□□ -0.57
SNX41Q04053 FUN26YAL022C 1554 nt11.45□□□□□ -0.58
SNX41Q04053 RKM5YLR137W 1104 nt11.45□□□□□ -0.58
SNX41Q04053 TRM9YML014W 840 nt11.44□□□□□ -0.58
SNX41Q04053 YPS1YLR120C 1710 nt11.4□□□□□ -0.58
SNX41Q04053 YJL225CYJL225C 5277 nt11.39□□□□□ -0.59
SNX41Q04053 NPL3YDR432W 1245 nt11.39□□□□□ -0.59
SNX41Q04053 YOL037CYOL037C 354 nt11.36□□□□□ -0.59
SNX41Q04053 FPS1YLL043W 2010 nt11.35□□□□□ -0.59
SNX41Q04053 CCT6YDR188W 1641 nt11.33□□□□□ -0.6
SNX41Q04053 MEP2YNL142W 1500 nt11.32□□□□□ -0.6
SNX41Q04053 YHR165W-AYHR165W-A 312 nt11.32□□□□□ -0.6
SNX41Q04053 YDR095CYDR095C 411 nt11.31□□□□□ -0.6
SNX41Q04053 ALF1YNL148C 765 nt11.3□□□□□ -0.6
SNX41Q04053 SUF2tP(AGG)C 72 nt11.22□□□□□ -0.61
SNX41Q04053 SUF10tP(AGG)N 72 nt11.22□□□□□ -0.61
SNX41Q04053 RDN37-1RDN37-1 5354 nt11.16□□□□□ -0.62
Retrieved 100 of 7,029 protein–RNA pairs in 70.7 ms