Protein–RNA interactions for Protein: P43586

LOC1, 60S ribosomal subunit assembly/export protein LOC1, yeastyeast

Predicted RBP Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LOC1P43586 NSR1YGR159C 1245 nt16.11■□□□□ 0.17
LOC1P43586 YML009W-BYML009W-B 477 nt15.79■□□□□ 0.12
LOC1P43586 NOP1YDL014W 984 nt15.12■□□□□ 0.01
LOC1P43586 MDJ1YFL016C 1536 nt14.79□□□□□ -0.04
LOC1P43586 YJL027CYJL027C 417 nt13.58□□□□□ -0.24
LOC1P43586 YKL036CYKL036C 393 nt13.5□□□□□ -0.25
LOC1P43586 SRX1YKL086W 384 nt13.22□□□□□ -0.29
LOC1P43586 Q0297Q0297 156 nt13.09□□□□□ -0.31
LOC1P43586 DBP2YNL112W 1641 nt12.89□□□□□ -0.35
LOC1P43586 SSA3YBL075C 1950 nt12.86□□□□□ -0.35
LOC1P43586 YBR190WYBR190W 312 nt12.73□□□□□ -0.37
LOC1P43586 YCR051WYCR051W 669 nt12.5□□□□□ -0.41
LOC1P43586 RTC3YHR087W 336 nt12.41□□□□□ -0.42
LOC1P43586 TRN1tP(UGG)A 72 nt12.27□□□□□ -0.45
LOC1P43586 SUF9tP(UGG)F 72 nt12.27□□□□□ -0.45
LOC1P43586 SUF8tP(UGG)H 72 nt12.27□□□□□ -0.45
LOC1P43586 tP(UGG)LtP(UGG)L 72 nt12.27□□□□□ -0.45
LOC1P43586 SUF7tP(UGG)M 72 nt12.27□□□□□ -0.45
LOC1P43586 tP(UGG)N1tP(UGG)N1 72 nt12.27□□□□□ -0.45
LOC1P43586 tP(UGG)N2tP(UGG)N2 72 nt12.27□□□□□ -0.45
LOC1P43586 tP(UGG)O1tP(UGG)O1 72 nt12.27□□□□□ -0.45
LOC1P43586 SUF11tP(UGG)O2 72 nt12.27□□□□□ -0.45
LOC1P43586 CCC1YLR220W 969 nt12.12□□□□□ -0.47
LOC1P43586 SCS3YGL126W 1143 nt12.03□□□□□ -0.48
LOC1P43586 RVS167YDR388W 1449 nt11.98□□□□□ -0.49
LOC1P43586 PUT4YOR348C 1884 nt11.95□□□□□ -0.5
LOC1P43586 SSA1YAL005C 1929 nt11.94□□□□□ -0.5
LOC1P43586 SCJ1YMR214W 1134 nt11.84□□□□□ -0.51
LOC1P43586 Q0182Q0182 405 nt11.78□□□□□ -0.52
LOC1P43586 RPP1BYDL130W 321 nt11.74□□□□□ -0.53
LOC1P43586 FPS1YLL043W 2010 nt11.71□□□□□ -0.53
LOC1P43586 YOL085CYOL085C 342 nt11.71□□□□□ -0.53
LOC1P43586 PKP1YIL042C 1185 nt11.6□□□□□ -0.55
LOC1P43586 ARE1YCR048W 1833 nt11.59□□□□□ -0.55
LOC1P43586 POA1YBR022W 534 nt11.53□□□□□ -0.56
LOC1P43586 NVJ2YPR091C 2313 nt11.46□□□□□ -0.57
LOC1P43586 SHR5YOL110W 714 nt11.46□□□□□ -0.57
LOC1P43586 URN1YPR152C 1398 nt11.45□□□□□ -0.58
LOC1P43586 YHR049C-AYHR049C-A 297 nt11.44□□□□□ -0.58
LOC1P43586 SAH1YER043C 1350 nt11.43□□□□□ -0.58
LOC1P43586 tP(UGG)O3tP(UGG)O3 72 nt11.43□□□□□ -0.58
LOC1P43586 BSC6YOL137W 1494 nt11.38□□□□□ -0.59
LOC1P43586 OPI9YLR338W 858 nt11.38□□□□□ -0.59
LOC1P43586 DEP1YAL013W 1218 nt11.3□□□□□ -0.6
LOC1P43586 PET122YER153C 765 nt11.29□□□□□ -0.6
LOC1P43586 SPT5YML010W 3192 nt11.24□□□□□ -0.61
LOC1P43586 PAC11YDR488C 1602 nt11.2□□□□□ -0.62
LOC1P43586 RPN10YHR200W 807 nt11.15□□□□□ -0.62
LOC1P43586 BUD23YCR047C 828 nt11.13□□□□□ -0.63
LOC1P43586 SSA4YER103W 1929 nt11.07□□□□□ -0.64
LOC1P43586 YNL208WYNL208W 600 nt11.07□□□□□ -0.64
LOC1P43586 YDJ1YNL064C 1230 nt11.06□□□□□ -0.64
LOC1P43586 PUN1YLR414C 792 nt11.05□□□□□ -0.64
LOC1P43586 SCR1SCR1 522 nt11.01□□□□□ -0.65
LOC1P43586 PTC2YER089C 1395 nt11□□□□□ -0.65
LOC1P43586 MOT3YMR070W 1473 nt10.99□□□□□ -0.65
LOC1P43586 NAB2YGL122C 1578 nt10.92□□□□□ -0.66
LOC1P43586 RRN5YLR141W 1092 nt10.91□□□□□ -0.66
LOC1P43586 GAR1YHR089C 618 nt10.89□□□□□ -0.67
LOC1P43586 YJR018WYJR018W 363 nt10.89□□□□□ -0.67
LOC1P43586 MEP2YNL142W 1500 nt10.74□□□□□ -0.69
LOC1P43586 FIS1YIL065C 468 nt10.73□□□□□ -0.69
LOC1P43586 BDF1YLR399C 2061 nt10.7□□□□□ -0.7
LOC1P43586 DAL1YIR027C 1383 nt10.69□□□□□ -0.7
LOC1P43586 YER088W-BYER088W-B 147 nt10.69□□□□□ -0.7
LOC1P43586 YJR120WYJR120W 351 nt10.64□□□□□ -0.71
LOC1P43586 FPR4YLR449W 1179 nt10.64□□□□□ -0.71
LOC1P43586 ATS1YAL020C 1002 nt10.61□□□□□ -0.71
LOC1P43586 PHO4YFR034C 939 nt10.59□□□□□ -0.71
LOC1P43586 YPS1YLR120C 1710 nt10.56□□□□□ -0.72
LOC1P43586 DCW1YKL046C 1350 nt10.56□□□□□ -0.72
LOC1P43586 TAT1YBR069C 1860 nt10.55□□□□□ -0.72
LOC1P43586 INM2YDR287W 879 nt10.55□□□□□ -0.72
LOC1P43586 TIR1YER011W 765 nt10.55□□□□□ -0.72
LOC1P43586 RPP2BYDR382W 333 nt10.53□□□□□ -0.72
LOC1P43586 RSB1YOR049C 1065 nt10.53□□□□□ -0.72
LOC1P43586 RPM1RPM1 483 nt10.51□□□□□ -0.73
LOC1P43586 UME6YDR207C 2511 nt10.49□□□□□ -0.73
LOC1P43586 YHR165W-AYHR165W-A 312 nt10.47□□□□□ -0.73
LOC1P43586 YDR095CYDR095C 411 nt10.42□□□□□ -0.74
LOC1P43586 EMI2YDR516C 1503 nt10.41□□□□□ -0.74
LOC1P43586 YBL100CYBL100C 315 nt10.39□□□□□ -0.75
LOC1P43586 YBR220CYBR220C 1683 nt10.38□□□□□ -0.75
LOC1P43586 YMR090WYMR090W 684 nt10.36□□□□□ -0.75
LOC1P43586 YDL221WYDL221W 552 nt10.28□□□□□ -0.76
LOC1P43586 SRB2YHR041C 633 nt10.27□□□□□ -0.77
LOC1P43586 SDH1YKL148C 1923 nt10.26□□□□□ -0.77
LOC1P43586 CAC2YML102W 1407 nt10.25□□□□□ -0.77
LOC1P43586 FUN26YAL022C 1554 nt10.24□□□□□ -0.77
LOC1P43586 PTP1YDL230W 1008 nt10.24□□□□□ -0.77
LOC1P43586 BDH2YAL061W 1254 nt10.24□□□□□ -0.77
LOC1P43586 RPP2AYOL039W 321 nt10.22□□□□□ -0.77
LOC1P43586 ALF1YNL148C 765 nt10.2□□□□□ -0.78
LOC1P43586 YJL225CYJL225C 5277 nt10.17□□□□□ -0.78
LOC1P43586 SCC4YER147C 1875 nt10.13□□□□□ -0.79
LOC1P43586 RDN37-1RDN37-1 5354 nt10.12□□□□□ -0.79
LOC1P43586 RDN37-2RDN37-2 5354 nt10.12□□□□□ -0.79
LOC1P43586 TRM9YML014W 840 nt10.12□□□□□ -0.79
LOC1P43586 PCH2YBR186W 1695 nt10.11□□□□□ -0.79
LOC1P43586 IRC15YPL017C 1500 nt10.1□□□□□ -0.79
Retrieved 100 of 7,029 protein–RNA pairs in 13.3 ms