Protein–RNA interactions for Protein: P33334

PRP8, Pre-mRNA-splicing factor 8, yeastyeast

Known RBP Predictions only

Length 2,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PRP8P33334 YML009W-BYML009W-B 477 nt18.53■□□□□ 0.56
PRP8P33334 NOP1YDL014W 984 nt18.02■□□□□ 0.47
PRP8P33334 NSR1YGR159C 1245 nt17.56■□□□□ 0.4
PRP8P33334 YKL036CYKL036C 393 nt17.46■□□□□ 0.39
PRP8P33334 YJL027CYJL027C 417 nt16.45■□□□□ 0.22
PRP8P33334 SCS3YGL126W 1143 nt16.38■□□□□ 0.21
PRP8P33334 Q0297Q0297 156 nt16.08■□□□□ 0.17
PRP8P33334 SRX1YKL086W 384 nt16.04■□□□□ 0.16
PRP8P33334 SCJ1YMR214W 1134 nt15.31■□□□□ 0.04
PRP8P33334 YCR051WYCR051W 669 nt15.1■□□□□ 0.01
PRP8P33334 YOL085CYOL085C 342 nt15.07■□□□□ 0
PRP8P33334 MDJ1YFL016C 1536 nt15.03■□□□□ -0
PRP8P33334 PKP1YIL042C 1185 nt14.91□□□□□ -0.02
PRP8P33334 ATS1YAL020C 1002 nt14.82□□□□□ -0.04
PRP8P33334 RPP1BYDL130W 321 nt14.33□□□□□ -0.12
PRP8P33334 TRN1tP(UGG)A 72 nt14.1□□□□□ -0.15
PRP8P33334 SUF9tP(UGG)F 72 nt14.1□□□□□ -0.15
PRP8P33334 SUF8tP(UGG)H 72 nt14.1□□□□□ -0.15
PRP8P33334 tP(UGG)LtP(UGG)L 72 nt14.1□□□□□ -0.15
PRP8P33334 SUF7tP(UGG)M 72 nt14.1□□□□□ -0.15
PRP8P33334 tP(UGG)N1tP(UGG)N1 72 nt14.1□□□□□ -0.15
PRP8P33334 tP(UGG)N2tP(UGG)N2 72 nt14.1□□□□□ -0.15
PRP8P33334 tP(UGG)O1tP(UGG)O1 72 nt14.1□□□□□ -0.15
PRP8P33334 SUF11tP(UGG)O2 72 nt14.1□□□□□ -0.15
PRP8P33334 RTC3YHR087W 336 nt14.05□□□□□ -0.16
PRP8P33334 CCC1YLR220W 969 nt13.91□□□□□ -0.18
PRP8P33334 SCR1SCR1 522 nt13.85□□□□□ -0.19
PRP8P33334 PET122YER153C 765 nt13.74□□□□□ -0.21
PRP8P33334 DBP2YNL112W 1641 nt13.69□□□□□ -0.22
PRP8P33334 RRN5YLR141W 1092 nt13.65□□□□□ -0.22
PRP8P33334 YKL097CYKL097C 411 nt13.51□□□□□ -0.25
PRP8P33334 PST2YDR032C 597 nt13.49□□□□□ -0.25
PRP8P33334 RSB1YOR049C 1065 nt13.49□□□□□ -0.25
PRP8P33334 tP(UGG)O3tP(UGG)O3 72 nt13.45□□□□□ -0.26
PRP8P33334 YER088W-BYER088W-B 147 nt13.37□□□□□ -0.27
PRP8P33334 RVS167YDR388W 1449 nt13.13□□□□□ -0.31
PRP8P33334 YOR139CYOR139C 393 nt12.94□□□□□ -0.34
PRP8P33334 YDJ1YNL064C 1230 nt12.85□□□□□ -0.35
PRP8P33334 GAR1YHR089C 618 nt12.84□□□□□ -0.35
PRP8P33334 SHU1YHL006C 453 nt12.8□□□□□ -0.36
PRP8P33334 SHR5YOL110W 714 nt12.7□□□□□ -0.38
PRP8P33334 NPL3YDR432W 1245 nt12.6□□□□□ -0.39
PRP8P33334 YBR190WYBR190W 312 nt12.49□□□□□ -0.41
PRP8P33334 YAL037C-BYAL037C-B 975 nt12.36□□□□□ -0.43
PRP8P33334 BSC6YOL137W 1494 nt12.23□□□□□ -0.45
PRP8P33334 tM(CAU)CtM(CAU)C 72 nt12.19□□□□□ -0.46
PRP8P33334 IMT4tM(CAU)E 72 nt12.19□□□□□ -0.46
PRP8P33334 IMT3tM(CAU)J3 72 nt12.19□□□□□ -0.46
PRP8P33334 IMT1tM(CAU)O1 72 nt12.19□□□□□ -0.46
PRP8P33334 IMT2tM(CAU)P 72 nt12.19□□□□□ -0.46
PRP8P33334 DEP1YAL013W 1218 nt12.16□□□□□ -0.46
PRP8P33334 MOT3YMR070W 1473 nt12.1□□□□□ -0.47
PRP8P33334 YOL037CYOL037C 354 nt12.03□□□□□ -0.48
PRP8P33334 TIR1YER011W 765 nt12.02□□□□□ -0.48
PRP8P33334 SSA1YAL005C 1929 nt12.02□□□□□ -0.49
PRP8P33334 MNP1YGL068W 585 nt12□□□□□ -0.49
PRP8P33334 RPN10YHR200W 807 nt11.97□□□□□ -0.49
PRP8P33334 YGR021WYGR021W 873 nt11.91□□□□□ -0.5
PRP8P33334 YNL208WYNL208W 600 nt11.9□□□□□ -0.5
PRP8P33334 HOM6YJR139C 1080 nt11.89□□□□□ -0.51
PRP8P33334 MRPL8YJL063C 717 nt11.88□□□□□ -0.51
PRP8P33334 SRB2YHR041C 633 nt11.86□□□□□ -0.51
PRP8P33334 PUS2YGL063W 1113 nt11.85□□□□□ -0.51
PRP8P33334 WWM1YFL010C 636 nt11.82□□□□□ -0.52
PRP8P33334 UBX6YJL048C 1191 nt11.82□□□□□ -0.52
PRP8P33334 URN1YPR152C 1398 nt11.81□□□□□ -0.52
PRP8P33334 FMP45YDL222C 930 nt11.69□□□□□ -0.54
PRP8P33334 YLR281CYLR281C 468 nt11.69□□□□□ -0.54
PRP8P33334 YEL076C-AYEL076C-A 651 nt11.68□□□□□ -0.54
PRP8P33334 YEL076CYEL076C 651 nt11.68□□□□□ -0.54
PRP8P33334 YLR464WYLR464W 651 nt11.68□□□□□ -0.54
PRP8P33334 YPR011CYPR011C 981 nt11.67□□□□□ -0.54
PRP8P33334 ADO1YJR105W 1023 nt11.63□□□□□ -0.55
PRP8P33334 WHI5YOR083W 888 nt11.62□□□□□ -0.55
PRP8P33334 SSA3YBL075C 1950 nt11.61□□□□□ -0.55
PRP8P33334 YFL015W-AYFL015W-A 318 nt11.61□□□□□ -0.55
PRP8P33334 YLR236CYLR236C 324 nt11.59□□□□□ -0.55
PRP8P33334 DSK2YMR276W 1122 nt11.57□□□□□ -0.56
PRP8P33334 YFL021C-AYFL021C-A 855 nt11.56□□□□□ -0.56
PRP8P33334 RKM5YLR137W 1104 nt11.54□□□□□ -0.56
PRP8P33334 OPI9YLR338W 858 nt11.53□□□□□ -0.56
PRP8P33334 SIS1YNL007C 1059 nt11.44□□□□□ -0.58
PRP8P33334 YDR094WYDR094W 336 nt11.41□□□□□ -0.58
PRP8P33334 RTG1YOL067C 534 nt11.39□□□□□ -0.59
PRP8P33334 YJR018WYJR018W 363 nt11.38□□□□□ -0.59
PRP8P33334 RPP2BYDR382W 333 nt11.37□□□□□ -0.59
PRP8P33334 YCH1YGR203W 447 nt11.37□□□□□ -0.59
PRP8P33334 PUN1YLR414C 792 nt11.33□□□□□ -0.6
PRP8P33334 ARE1YCR048W 1833 nt11.31□□□□□ -0.6
PRP8P33334 SAH1YER043C 1350 nt11.31□□□□□ -0.6
PRP8P33334 SBA1YKL117W 651 nt11.29□□□□□ -0.6
PRP8P33334 YJR120WYJR120W 351 nt11.27□□□□□ -0.6
PRP8P33334 SPP1YPL138C 1062 nt11.26□□□□□ -0.61
PRP8P33334 PTC2YER089C 1395 nt11.2□□□□□ -0.62
PRP8P33334 HUA1YGR268C 597 nt11.19□□□□□ -0.62
PRP8P33334 LSM3YLR438C-A 270 nt11.17□□□□□ -0.62
PRP8P33334 IMP2'YIL154C 1041 nt11.17□□□□□ -0.62
PRP8P33334 LPX1YOR084W 1164 nt11.17□□□□□ -0.62
PRP8P33334 BDH2YAL061W 1254 nt11.13□□□□□ -0.63
PRP8P33334 PUT4YOR348C 1884 nt11.08□□□□□ -0.64
Retrieved 100 of 7,029 protein–RNA pairs in 14.1 ms