Protein–RNA interactions for Protein: P53172

SDS23, Protein SDS23, yeastyeast

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SDS23P53172 NSR1YGR159C 1245 nt15.36■□□□□ 0.05
SDS23P53172 YML009W-BYML009W-B 477 nt14.94□□□□□ -0.02
SDS23P53172 NOP1YDL014W 984 nt14.34□□□□□ -0.11
SDS23P53172 MDJ1YFL016C 1536 nt14.1□□□□□ -0.15
SDS23P53172 YJL027CYJL027C 417 nt12.97□□□□□ -0.33
SDS23P53172 YKL036CYKL036C 393 nt12.73□□□□□ -0.37
SDS23P53172 SRX1YKL086W 384 nt12.54□□□□□ -0.4
SDS23P53172 Q0297Q0297 156 nt12.41□□□□□ -0.42
SDS23P53172 DBP2YNL112W 1641 nt12.3□□□□□ -0.44
SDS23P53172 YBR190WYBR190W 312 nt12.2□□□□□ -0.46
SDS23P53172 SSA3YBL075C 1950 nt12.07□□□□□ -0.48
SDS23P53172 RTC3YHR087W 336 nt11.83□□□□□ -0.52
SDS23P53172 YCR051WYCR051W 669 nt11.79□□□□□ -0.52
SDS23P53172 TRN1tP(UGG)A 72 nt11.67□□□□□ -0.54
SDS23P53172 SUF9tP(UGG)F 72 nt11.67□□□□□ -0.54
SDS23P53172 SUF8tP(UGG)H 72 nt11.67□□□□□ -0.54
SDS23P53172 tP(UGG)LtP(UGG)L 72 nt11.67□□□□□ -0.54
SDS23P53172 SUF7tP(UGG)M 72 nt11.67□□□□□ -0.54
SDS23P53172 tP(UGG)N1tP(UGG)N1 72 nt11.67□□□□□ -0.54
SDS23P53172 tP(UGG)N2tP(UGG)N2 72 nt11.67□□□□□ -0.54
SDS23P53172 tP(UGG)O1tP(UGG)O1 72 nt11.67□□□□□ -0.54
SDS23P53172 SUF11tP(UGG)O2 72 nt11.67□□□□□ -0.54
SDS23P53172 PUT4YOR348C 1884 nt11.5□□□□□ -0.57
SDS23P53172 CCC1YLR220W 969 nt11.44□□□□□ -0.58
SDS23P53172 RVS167YDR388W 1449 nt11.42□□□□□ -0.58
SDS23P53172 SCS3YGL126W 1143 nt11.32□□□□□ -0.6
SDS23P53172 SCJ1YMR214W 1134 nt11.28□□□□□ -0.6
SDS23P53172 ARE1YCR048W 1833 nt11.12□□□□□ -0.63
SDS23P53172 RPP1BYDL130W 321 nt11.11□□□□□ -0.63
SDS23P53172 YOL085CYOL085C 342 nt11.04□□□□□ -0.64
SDS23P53172 POA1YBR022W 534 nt11.03□□□□□ -0.64
SDS23P53172 YHR049C-AYHR049C-A 297 nt10.96□□□□□ -0.65
SDS23P53172 BSC6YOL137W 1494 nt10.93□□□□□ -0.66
SDS23P53172 SAH1YER043C 1350 nt10.93□□□□□ -0.66
SDS23P53172 SHR5YOL110W 714 nt10.92□□□□□ -0.66
SDS23P53172 SPT5YML010W 3192 nt10.91□□□□□ -0.66
SDS23P53172 URN1YPR152C 1398 nt10.9□□□□□ -0.66
SDS23P53172 OPI9YLR338W 858 nt10.9□□□□□ -0.66
SDS23P53172 PKP1YIL042C 1185 nt10.88□□□□□ -0.67
SDS23P53172 tP(UGG)O3tP(UGG)O3 72 nt10.83□□□□□ -0.68
SDS23P53172 SSA4YER103W 1929 nt10.73□□□□□ -0.69
SDS23P53172 DEP1YAL013W 1218 nt10.7□□□□□ -0.7
SDS23P53172 PET122YER153C 765 nt10.66□□□□□ -0.7
SDS23P53172 RPN10YHR200W 807 nt10.65□□□□□ -0.7
SDS23P53172 BUD23YCR047C 828 nt10.61□□□□□ -0.71
SDS23P53172 PUN1YLR414C 792 nt10.58□□□□□ -0.72
SDS23P53172 YNL208WYNL208W 600 nt10.54□□□□□ -0.72
SDS23P53172 YDJ1YNL064C 1230 nt10.53□□□□□ -0.72
SDS23P53172 PTC2YER089C 1395 nt10.5□□□□□ -0.73
SDS23P53172 NAB2YGL122C 1578 nt10.46□□□□□ -0.74
SDS23P53172 BDF1YLR399C 2061 nt10.41□□□□□ -0.74
SDS23P53172 SCR1SCR1 522 nt10.4□□□□□ -0.74
SDS23P53172 YJR018WYJR018W 363 nt10.38□□□□□ -0.75
SDS23P53172 MEP2YNL142W 1500 nt10.33□□□□□ -0.76
SDS23P53172 FIS1YIL065C 468 nt10.31□□□□□ -0.76
SDS23P53172 GAR1YHR089C 618 nt10.3□□□□□ -0.76
SDS23P53172 RRN5YLR141W 1092 nt10.29□□□□□ -0.76
SDS23P53172 TAT1YBR069C 1860 nt10.27□□□□□ -0.77
SDS23P53172 DAL1YIR027C 1383 nt10.23□□□□□ -0.77
SDS23P53172 YJR120WYJR120W 351 nt10.17□□□□□ -0.78
SDS23P53172 DCW1YKL046C 1350 nt10.14□□□□□ -0.79
SDS23P53172 YPS1YLR120C 1710 nt10.14□□□□□ -0.79
SDS23P53172 PHO4YFR034C 939 nt10.13□□□□□ -0.79
SDS23P53172 INM2YDR287W 879 nt10.1□□□□□ -0.79
SDS23P53172 YER088W-BYER088W-B 147 nt10.1□□□□□ -0.79
SDS23P53172 FPR4YLR449W 1179 nt10.1□□□□□ -0.79
SDS23P53172 YBR220CYBR220C 1683 nt10.02□□□□□ -0.81
SDS23P53172 YDR095CYDR095C 411 nt10.01□□□□□ -0.81
SDS23P53172 RPP2BYDR382W 333 nt10.01□□□□□ -0.81
SDS23P53172 TIR1YER011W 765 nt10.01□□□□□ -0.81
SDS23P53172 YHR165W-AYHR165W-A 312 nt10.01□□□□□ -0.81
SDS23P53172 EMI2YDR516C 1503 nt10.01□□□□□ -0.81
SDS23P53172 SSA1YAL005C 1929 nt10□□□□□ -0.81
SDS23P53172 YMR090WYMR090W 684 nt9.97□□□□□ -0.81
SDS23P53172 Q0182Q0182 405 nt9.96□□□□□ -0.82
SDS23P53172 ATS1YAL020C 1002 nt9.96□□□□□ -0.82
SDS23P53172 PAC11YDR488C 1602 nt9.93□□□□□ -0.82
SDS23P53172 YDL221WYDL221W 552 nt9.9□□□□□ -0.82
SDS23P53172 YBL100CYBL100C 315 nt9.9□□□□□ -0.82
SDS23P53172 RSB1YOR049C 1065 nt9.9□□□□□ -0.82
SDS23P53172 SDH1YKL148C 1923 nt9.88□□□□□ -0.83
SDS23P53172 PTP1YDL230W 1008 nt9.84□□□□□ -0.83
SDS23P53172 YJL225CYJL225C 5277 nt9.82□□□□□ -0.84
SDS23P53172 CAC2YML102W 1407 nt9.82□□□□□ -0.84
SDS23P53172 RPP2AYOL039W 321 nt9.79□□□□□ -0.84
SDS23P53172 PCH2YBR186W 1695 nt9.78□□□□□ -0.84
SDS23P53172 FUN26YAL022C 1554 nt9.76□□□□□ -0.85
SDS23P53172 SEC11YIR022W 504 nt9.76□□□□□ -0.85
SDS23P53172 BDH2YAL061W 1254 nt9.76□□□□□ -0.85
SDS23P53172 GUT2YIL155C 1950 nt9.75□□□□□ -0.85
SDS23P53172 SRB2YHR041C 633 nt9.74□□□□□ -0.85
SDS23P53172 SCC4YER147C 1875 nt9.73□□□□□ -0.85
SDS23P53172 ALF1YNL148C 765 nt9.71□□□□□ -0.86
SDS23P53172 IRC15YPL017C 1500 nt9.7□□□□□ -0.86
SDS23P53172 NVJ2YPR091C 2313 nt9.65□□□□□ -0.87
SDS23P53172 TRM9YML014W 840 nt9.63□□□□□ -0.87
SDS23P53172 SIS1YNL007C 1059 nt9.63□□□□□ -0.87
SDS23P53172 PIB2YGL023C 1908 nt9.62□□□□□ -0.87
SDS23P53172 GIS3YLR094C 1509 nt9.61□□□□□ -0.87
SDS23P53172 CCT6YDR188W 1641 nt9.61□□□□□ -0.87
Retrieved 100 of 7,029 protein–RNA pairs in 9.5 ms