Protein–RNA interactions for Protein: P53850

RTC4, Restriction of telomere capping protein 4, yeastyeast

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RTC4P53850 YML009W-BYML009W-B 477 nt22.98■■□□□ 1.27
RTC4P53850 NSR1YGR159C 1245 nt22.9■■□□□ 1.26
RTC4P53850 NOP1YDL014W 984 nt22.37■■□□□ 1.17
RTC4P53850 YKL036CYKL036C 393 nt20.53■□□□□ 0.88
RTC4P53850 MDJ1YFL016C 1536 nt20.36■□□□□ 0.85
RTC4P53850 Q0297Q0297 156 nt19.49■□□□□ 0.71
RTC4P53850 SRX1YKL086W 384 nt19.49■□□□□ 0.71
RTC4P53850 YJL027CYJL027C 417 nt19.16■□□□□ 0.66
RTC4P53850 SCS3YGL126W 1143 nt18.6■□□□□ 0.57
RTC4P53850 YCR051WYCR051W 669 nt18.51■□□□□ 0.55
RTC4P53850 DBP2YNL112W 1641 nt17.94■□□□□ 0.46
RTC4P53850 YOL085CYOL085C 342 nt17.76■□□□□ 0.43
RTC4P53850 TRN1tP(UGG)A 72 nt17.63■□□□□ 0.41
RTC4P53850 SUF9tP(UGG)F 72 nt17.63■□□□□ 0.41
RTC4P53850 SUF8tP(UGG)H 72 nt17.63■□□□□ 0.41
RTC4P53850 tP(UGG)LtP(UGG)L 72 nt17.63■□□□□ 0.41
RTC4P53850 SUF7tP(UGG)M 72 nt17.63■□□□□ 0.41
RTC4P53850 tP(UGG)N1tP(UGG)N1 72 nt17.63■□□□□ 0.41
RTC4P53850 tP(UGG)N2tP(UGG)N2 72 nt17.63■□□□□ 0.41
RTC4P53850 tP(UGG)O1tP(UGG)O1 72 nt17.63■□□□□ 0.41
RTC4P53850 SUF11tP(UGG)O2 72 nt17.63■□□□□ 0.41
RTC4P53850 CCC1YLR220W 969 nt17.51■□□□□ 0.39
RTC4P53850 RPP1BYDL130W 321 nt17.5■□□□□ 0.39
RTC4P53850 PKP1YIL042C 1185 nt17.5■□□□□ 0.39
RTC4P53850 YBR190WYBR190W 312 nt17.41■□□□□ 0.38
RTC4P53850 RTC3YHR087W 336 nt17.07■□□□□ 0.32
RTC4P53850 RVS167YDR388W 1449 nt16.98■□□□□ 0.31
RTC4P53850 SCJ1YMR214W 1134 nt16.75■□□□□ 0.27
RTC4P53850 PET122YER153C 765 nt16.69■□□□□ 0.26
RTC4P53850 tP(UGG)O3tP(UGG)O3 72 nt16.68■□□□□ 0.26
RTC4P53850 ATS1YAL020C 1002 nt16.63■□□□□ 0.25
RTC4P53850 SCR1SCR1 522 nt16.59■□□□□ 0.25
RTC4P53850 SHR5YOL110W 714 nt16.33■□□□□ 0.2
RTC4P53850 RRN5YLR141W 1092 nt16.24■□□□□ 0.19
RTC4P53850 YDJ1YNL064C 1230 nt16.14■□□□□ 0.17
RTC4P53850 URN1YPR152C 1398 nt15.91■□□□□ 0.14
RTC4P53850 YER088W-BYER088W-B 147 nt15.91■□□□□ 0.14
RTC4P53850 RSB1YOR049C 1065 nt15.9■□□□□ 0.14
RTC4P53850 DEP1YAL013W 1218 nt15.88■□□□□ 0.13
RTC4P53850 PUT4YOR348C 1884 nt15.8■□□□□ 0.12
RTC4P53850 GAR1YHR089C 618 nt15.8■□□□□ 0.12
RTC4P53850 RPN10YHR200W 807 nt15.72■□□□□ 0.11
RTC4P53850 OPI9YLR338W 858 nt15.68■□□□□ 0.1
RTC4P53850 YNL208WYNL208W 600 nt15.66■□□□□ 0.1
RTC4P53850 SAH1YER043C 1350 nt15.6■□□□□ 0.09
RTC4P53850 ARE1YCR048W 1833 nt15.5■□□□□ 0.07
RTC4P53850 PST2YDR032C 597 nt15.4■□□□□ 0.06
RTC4P53850 POA1YBR022W 534 nt15.36■□□□□ 0.05
RTC4P53850 YHR049C-AYHR049C-A 297 nt15.34■□□□□ 0.05
RTC4P53850 TIR1YER011W 765 nt15.27■□□□□ 0.04
RTC4P53850 PUN1YLR414C 792 nt15.26■□□□□ 0.03
RTC4P53850 YJR018WYJR018W 363 nt15.19■□□□□ 0.02
RTC4P53850 PTC2YER089C 1395 nt15.07■□□□□ 0
RTC4P53850 SSA1YAL005C 1929 nt15.06■□□□□ 0
RTC4P53850 BUD23YCR047C 828 nt15.02■□□□□ -0
RTC4P53850 BSC6YOL137W 1494 nt15.01□□□□□ -0.01
RTC4P53850 RPP2BYDR382W 333 nt14.91□□□□□ -0.02
RTC4P53850 NAB2YGL122C 1578 nt14.89□□□□□ -0.03
RTC4P53850 YJR120WYJR120W 351 nt14.83□□□□□ -0.04
RTC4P53850 SSA3YBL075C 1950 nt14.82□□□□□ -0.04
RTC4P53850 YKL097CYKL097C 411 nt14.79□□□□□ -0.04
RTC4P53850 SHU1YHL006C 453 nt14.78□□□□□ -0.04
RTC4P53850 SRB2YHR041C 633 nt14.73□□□□□ -0.05
RTC4P53850 INM2YDR287W 879 nt14.68□□□□□ -0.06
RTC4P53850 FPR4YLR449W 1179 nt14.68□□□□□ -0.06
RTC4P53850 DAL1YIR027C 1383 nt14.68□□□□□ -0.06
RTC4P53850 FIS1YIL065C 468 nt14.6□□□□□ -0.07
RTC4P53850 YAL037C-BYAL037C-B 975 nt14.59□□□□□ -0.07
RTC4P53850 WWM1YFL010C 636 nt14.57□□□□□ -0.08
RTC4P53850 BDH2YAL061W 1254 nt14.55□□□□□ -0.08
RTC4P53850 PHO4YFR034C 939 nt14.51□□□□□ -0.09
RTC4P53850 YGR021WYGR021W 873 nt14.51□□□□□ -0.09
RTC4P53850 YBL100CYBL100C 315 nt14.5□□□□□ -0.09
RTC4P53850 HOM6YJR139C 1080 nt14.4□□□□□ -0.1
RTC4P53850 LSM3YLR438C-A 270 nt14.37□□□□□ -0.11
RTC4P53850 YFL021C-AYFL021C-A 855 nt14.36□□□□□ -0.11
RTC4P53850 FUN26YAL022C 1554 nt14.32□□□□□ -0.12
RTC4P53850 TRM9YML014W 840 nt14.32□□□□□ -0.12
RTC4P53850 MNP1YGL068W 585 nt14.3□□□□□ -0.12
RTC4P53850 YPS1YLR120C 1710 nt14.24□□□□□ -0.13
RTC4P53850 SPT5YML010W 3192 nt14.23□□□□□ -0.13
RTC4P53850 RKM5YLR137W 1104 nt14.2□□□□□ -0.14
RTC4P53850 ALF1YNL148C 765 nt14.19□□□□□ -0.14
RTC4P53850 YDR095CYDR095C 411 nt14.14□□□□□ -0.15
RTC4P53850 YHR165W-AYHR165W-A 312 nt14.14□□□□□ -0.15
RTC4P53850 YOR139CYOR139C 393 nt14.14□□□□□ -0.15
RTC4P53850 NPL3YDR432W 1245 nt14.13□□□□□ -0.15
RTC4P53850 CCT6YDR188W 1641 nt14.12□□□□□ -0.15
RTC4P53850 MEP2YNL142W 1500 nt14.1□□□□□ -0.15
RTC4P53850 YOL037CYOL037C 354 nt14.09□□□□□ -0.15
RTC4P53850 SUF2tP(AGG)C 72 nt14.08□□□□□ -0.16
RTC4P53850 SUF10tP(AGG)N 72 nt14.08□□□□□ -0.16
RTC4P53850 RPP2AYOL039W 321 nt13.91□□□□□ -0.18
RTC4P53850 SIS1YNL007C 1059 nt13.9□□□□□ -0.18
RTC4P53850 DCW1YKL046C 1350 nt13.84□□□□□ -0.19
RTC4P53850 SSA4YER103W 1929 nt13.8□□□□□ -0.2
RTC4P53850 PTP1YDL230W 1008 nt13.79□□□□□ -0.2
RTC4P53850 YLR154C-GYLR154C-G 150 nt13.74□□□□□ -0.21
RTC4P53850 YLR281CYLR281C 468 nt13.74□□□□□ -0.21
RTC4P53850 WHI5YOR083W 888 nt13.73□□□□□ -0.21
Retrieved 100 of 7,029 protein–RNA pairs in 13.4 ms