RNA–Protein interactions for RNA: YKR100C

SKG1, Transcript of Transmembrane protein with a role in cell wall polymer composition, yeast

Gene SKG1, Length 1,068 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKG1	YKR100C	RPA190	P10964	1664 aa	Known RBP	10.84	□□□□□ -0.67
SKG1	YKR100C	RRD1	P40454	393 aa	Known RBP	10.83	□□□□□ -0.68
SKG1	YKR100C	RAD59	Q12223	238 aa		10.82	□□□□□ -0.68
SKG1	YKR100C	CDC25	P04821	1589 aa		10.82	□□□□□ -0.68
SKG1	YKR100C	HED1	Q03937	162 aa		10.8	□□□□□ -0.68
SKG1	YKR100C	ITT1	Q04638	464 aa		10.77	□□□□□ -0.69
SKG1	YKR100C	MET5	P47169	1442 aa		10.75	□□□□□ -0.69
SKG1	YKR100C	CDC4	P07834	779 aa		10.74	□□□□□ -0.69
SKG1	YKR100C	LEO1	P38439	464 aa		10.74	□□□□□ -0.69
SKG1	YKR100C	ATG2	P53855	1592 aa		10.73	□□□□□ -0.69
SKG1	YKR100C	HPC2	Q01448	625 aa		10.73	□□□□□ -0.69
SKG1	YKR100C	MMS1	Q06211	1407 aa		10.7	□□□□□ -0.7
SKG1	YKR100C	SYH1	Q02875	849 aa	Known RBP	10.7	□□□□□ -0.7
SKG1	YKR100C	MET32	Q12041	191 aa		10.7	□□□□□ -0.7
SKG1	YKR100C	KIP2	P28743	706 aa		10.68	□□□□□ -0.7
SKG1	YKR100C	TFB3	Q03290	321 aa		10.67	□□□□□ -0.7
SKG1	YKR100C	ESC1	Q03661	1658 aa	Known RBP	10.66	□□□□□ -0.7
SKG1	YKR100C	SSK2	P53599	1579 aa		10.66	□□□□□ -0.7
SKG1	YKR100C	IXR1	P33417	597 aa		10.65	□□□□□ -0.7
SKG1	YKR100C	GEA2	P39993	1459 aa	Known RBP	10.65	□□□□□ -0.7
SKG1	YKR100C	VAC17	P25591	423 aa		10.64	□□□□□ -0.71
SKG1	YKR100C	BRL1	P38770	471 aa		10.64	□□□□□ -0.71
SKG1	YKR100C	MAK16	P10962	306 aa	Predicted RBP	10.62	□□□□□ -0.71
SKG1	YKR100C	ASH1	P34233	588 aa		10.62	□□□□□ -0.71
SKG1	YKR100C	PKC1	P24583	1151 aa		10.61	□□□□□ -0.71
SKG1	YKR100C	FIG4	P42837	879 aa		10.61	□□□□□ -0.71
SKG1	YKR100C	BRE2	P43132	505 aa		10.61	□□□□□ -0.71
SKG1	YKR100C	AFT1	P22149	690 aa		10.59	□□□□□ -0.71
SKG1	YKR100C	RPO31	P04051	1460 aa		10.59	□□□□□ -0.71
SKG1	YKR100C	YBL036C	P38197	257 aa		10.58	□□□□□ -0.72
SKG1	YKR100C	HST3	P53687	447 aa		10.58	□□□□□ -0.72
SKG1	YKR100C	CSE4	P36012	229 aa		10.57	□□□□□ -0.72
SKG1	YKR100C	GCR2	Q01722	534 aa		10.56	□□□□□ -0.72
SKG1	YKR100C	TEC1	P18412	486 aa		10.54	□□□□□ -0.72
SKG1	YKR100C	MRT4	P33201	236 aa	Known RBP	10.54	□□□□□ -0.72
SKG1	YKR100C	SGS1	P35187	1447 aa		10.53	□□□□□ -0.72
SKG1	YKR100C	NAF1	P53919	492 aa	Known RBP	10.51	□□□□□ -0.73
SKG1	YKR100C	YPR084W	Q06821	456 aa		10.51	□□□□□ -0.73
SKG1	YKR100C	APP1	P53933	587 aa		10.49	□□□□□ -0.73
SKG1	YKR100C	YJR115W	P47152	169 aa		10.48	□□□□□ -0.73
SKG1	YKR100C	MSB3	P48566	633 aa	Predicted RBP	10.48	□□□□□ -0.73
SKG1	YKR100C	YDJ1	P25491	409 aa	Known RBP	10.46	□□□□□ -0.73
SKG1	YKR100C	UGA3	P26370	528 aa		10.46	□□□□□ -0.73
SKG1	YKR100C	BIO2	P32451	375 aa		10.46	□□□□□ -0.73
SKG1	YKR100C	EMW1	P42842	904 aa	Known RBP	10.46	□□□□□ -0.73
SKG1	YKR100C	DNF2	Q12675	1612 aa		10.46	□□□□□ -0.74
SKG1	YKR100C	SPT5	P27692	1063 aa	Known RBP	10.45	□□□□□ -0.74
SKG1	YKR100C	GUT2	P32191	649 aa		10.45	□□□□□ -0.74
SKG1	YKR100C	RKR1	Q04781	1562 aa		10.44	□□□□□ -0.74
SKG1	YKR100C	YOR093C	Q12275	1648 aa		10.44	□□□□□ -0.74
SKG1	YKR100C	XRN1	P22147	1528 aa	Known RBP	10.43	□□□□□ -0.74
SKG1	YKR100C	YBL086C	P38177	466 aa		10.42	□□□□□ -0.74
SKG1	YKR100C	HGH1	P48362	394 aa	Known RBP	10.42	□□□□□ -0.74
SKG1	YKR100C	YJL007C	P47080	104 aa		10.41	□□□□□ -0.74
SKG1	YKR100C	STE20	Q03497	939 aa	Known RBP	10.41	□□□□□ -0.74
SKG1	YKR100C	FRA1	Q07825	749 aa		10.41	□□□□□ -0.74
SKG1	YKR100C	MCM16	Q12262	181 aa		10.4	□□□□□ -0.74
SKG1	YKR100C	ISF1	P32488	338 aa		10.39	□□□□□ -0.75
SKG1	YKR100C	YNL108C	P53929	270 aa		10.39	□□□□□ -0.75
SKG1	YKR100C	MET22	P32179	357 aa		10.38	□□□□□ -0.75
SKG1	YKR100C	PTK2	P47116	818 aa	Known RBP	10.38	□□□□□ -0.75
SKG1	YKR100C	RTT106	P40161	455 aa		10.37	□□□□□ -0.75
SKG1	YKR100C	EMP47	P43555	445 aa		10.37	□□□□□ -0.75
SKG1	YKR100C	DMA2	P53924	522 aa		10.37	□□□□□ -0.75
SKG1	YKR100C	SUP45	P12385	437 aa	Known RBP	10.36	□□□□□ -0.75
SKG1	YKR100C	MKS1	P34072	584 aa		10.36	□□□□□ -0.75
SKG1	YKR100C	SRF1	Q12516	437 aa		10.35	□□□□□ -0.75
SKG1	YKR100C	BIM1	P40013	344 aa		10.34	□□□□□ -0.75
SKG1	YKR100C	ENO2	P00925	437 aa	Known RBP	10.33	□□□□□ -0.76
SKG1	YKR100C	ENV9	Q08651	330 aa		10.33	□□□□□ -0.76
SKG1	YKR100C	DRS2	P39524	1355 aa		10.32	□□□□□ -0.76
SKG1	YKR100C	GAR1	P28007	205 aa	Known RBP	10.31	□□□□□ -0.76
SKG1	YKR100C	ATG32	P40458	529 aa		10.31	□□□□□ -0.76
SKG1	YKR100C	MRX12	P47084	519 aa		10.31	□□□□□ -0.76
SKG1	YKR100C	YDR444W	Q04093	687 aa		10.31	□□□□□ -0.76
SKG1	YKR100C	DFG5	Q05031	458 aa		10.31	□□□□□ -0.76
SKG1	YKR100C	ATG20	Q07528	640 aa		10.31	□□□□□ -0.76
SKG1	YKR100C	SKI3	P17883	1432 aa	Known RBP	10.31	□□□□□ -0.76
SKG1	YKR100C	FBP26	P32604	452 aa		10.3	□□□□□ -0.76
SKG1	YKR100C	AAD14	P42884	376 aa		10.29	□□□□□ -0.76
SKG1	YKR100C	ARG82	P07250	355 aa		10.28	□□□□□ -0.76
SKG1	YKR100C	APL6	P46682	809 aa		10.28	□□□□□ -0.76
SKG1	YKR100C	YPP1	P46951	817 aa		10.28	□□□□□ -0.76
SKG1	YKR100C	NUP85	P46673	744 aa		10.27	□□□□□ -0.77
SKG1	YKR100C	LCB5	Q06147	687 aa	Known RBP	10.27	□□□□□ -0.77
SKG1	YKR100C	TIF1	P10081	395 aa	Known RBP	10.26	□□□□□ -0.77
SKG1	YKR100C	BDS1	Q08347	646 aa		10.26	□□□□□ -0.77
SKG1	YKR100C	STE6	P12866	1290 aa		10.25	□□□□□ -0.77
SKG1	YKR100C	RIM21	P48565	533 aa		10.25	□□□□□ -0.77
SKG1	YKR100C	ISU1	Q03020	165 aa		10.25	□□□□□ -0.77
SKG1	YKR100C	CHD1	P32657	1468 aa		10.24	□□□□□ -0.77
SKG1	YKR100C	ISR1	Q06098	443 aa	Known RBP	10.24	□□□□□ -0.77
SKG1	YKR100C	UFD4	P33202	1483 aa		10.23	□□□□□ -0.77
SKG1	YKR100C	RPL34B	P40525	121 aa	Known RBP	10.23	□□□□□ -0.77
SKG1	YKR100C	OPT2	Q06593	877 aa		10.22	□□□□□ -0.77
SKG1	YKR100C	DLD1	P32891	587 aa		10.21	□□□□□ -0.77
SKG1	YKR100C	GBP2	P25555	427 aa	Known RBP RIP-Chip data	10.2	□□□□□ -0.78	RIP-Chip
SKG1	YKR100C	RTG2	P32608	588 aa	Known RBP	10.2	□□□□□ -0.78
SKG1	YKR100C	SOH1	P38633	127 aa		10.2	□□□□□ -0.78
SKG1	YKR100C	HAL5	P38970	855 aa	Known RBP	10.19	□□□□□ -0.78

Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms