Protein–RNA interactions for Protein: P46682

APL6, AP-3 complex subunit beta, yeastyeast

Predictions only

Length 809 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
APL6P46682 YML009W-BYML009W-B 477 nt24.3■■□□□ 1.48
APL6P46682 NSR1YGR159C 1245 nt23.81■■□□□ 1.4
APL6P46682 NOP1YDL014W 984 nt23.74■■□□□ 1.39
APL6P46682 YKL036CYKL036C 393 nt22.23■■□□□ 1.15
APL6P46682 Q0297Q0297 156 nt20.88■□□□□ 0.93
APL6P46682 MDJ1YFL016C 1536 nt20.84■□□□□ 0.93
APL6P46682 YJL027CYJL027C 417 nt20.82■□□□□ 0.92
APL6P46682 SRX1YKL086W 384 nt20.74■□□□□ 0.91
APL6P46682 SCS3YGL126W 1143 nt20.4■□□□□ 0.86
APL6P46682 YCR051WYCR051W 669 nt19.73■□□□□ 0.75
APL6P46682 YOL085CYOL085C 342 nt19.24■□□□□ 0.67
APL6P46682 PKP1YIL042C 1185 nt18.93■□□□□ 0.62
APL6P46682 RPP1BYDL130W 321 nt18.75■□□□□ 0.59
APL6P46682 DBP2YNL112W 1641 nt18.56■□□□□ 0.56
APL6P46682 TRN1tP(UGG)A 72 nt18.55■□□□□ 0.56
APL6P46682 SUF9tP(UGG)F 72 nt18.55■□□□□ 0.56
APL6P46682 SUF8tP(UGG)H 72 nt18.55■□□□□ 0.56
APL6P46682 tP(UGG)LtP(UGG)L 72 nt18.55■□□□□ 0.56
APL6P46682 SUF7tP(UGG)M 72 nt18.55■□□□□ 0.56
APL6P46682 tP(UGG)N1tP(UGG)N1 72 nt18.55■□□□□ 0.56
APL6P46682 tP(UGG)N2tP(UGG)N2 72 nt18.55■□□□□ 0.56
APL6P46682 tP(UGG)O1tP(UGG)O1 72 nt18.55■□□□□ 0.56
APL6P46682 SUF11tP(UGG)O2 72 nt18.55■□□□□ 0.56
APL6P46682 SCJ1YMR214W 1134 nt18.48■□□□□ 0.55
APL6P46682 CCC1YLR220W 969 nt18.39■□□□□ 0.53
APL6P46682 ATS1YAL020C 1002 nt18.34■□□□□ 0.53
APL6P46682 PET122YER153C 765 nt17.88■□□□□ 0.45
APL6P46682 SCR1SCR1 522 nt17.79■□□□□ 0.44
APL6P46682 tP(UGG)O3tP(UGG)O3 72 nt17.67■□□□□ 0.42
APL6P46682 YBR190WYBR190W 312 nt17.66■□□□□ 0.42
APL6P46682 RVS167YDR388W 1449 nt17.55■□□□□ 0.4
APL6P46682 RRN5YLR141W 1092 nt17.4■□□□□ 0.38
APL6P46682 RTC3YHR087W 336 nt17.33■□□□□ 0.36
APL6P46682 RSB1YOR049C 1065 nt17.15■□□□□ 0.34
APL6P46682 YDJ1YNL064C 1230 nt17.08■□□□□ 0.32
APL6P46682 YER088W-BYER088W-B 147 nt17.05■□□□□ 0.32
APL6P46682 SHR5YOL110W 714 nt17.02■□□□□ 0.32
APL6P46682 PST2YDR032C 597 nt16.91■□□□□ 0.3
APL6P46682 GAR1YHR089C 618 nt16.67■□□□□ 0.26
APL6P46682 YKL097CYKL097C 411 nt16.45■□□□□ 0.22
APL6P46682 DEP1YAL013W 1218 nt16.44■□□□□ 0.22
APL6P46682 URN1YPR152C 1398 nt16.33■□□□□ 0.2
APL6P46682 YNL208WYNL208W 600 nt16.2■□□□□ 0.18
APL6P46682 RPN10YHR200W 807 nt16.17■□□□□ 0.18
APL6P46682 SHU1YHL006C 453 nt16.16■□□□□ 0.18
APL6P46682 TIR1YER011W 765 nt16.08■□□□□ 0.16
APL6P46682 OPI9YLR338W 858 nt16.01■□□□□ 0.15
APL6P46682 SSA3YBL075C 1950 nt15.84■□□□□ 0.13
APL6P46682 SAH1YER043C 1350 nt15.83■□□□□ 0.12
APL6P46682 YAL037C-BYAL037C-B 975 nt15.82■□□□□ 0.12
APL6P46682 SSA1YAL005C 1929 nt15.81■□□□□ 0.12
APL6P46682 PUT4YOR348C 1884 nt15.76■□□□□ 0.11
APL6P46682 YOR139CYOR139C 393 nt15.72■□□□□ 0.11
APL6P46682 SRB2YHR041C 633 nt15.6■□□□□ 0.09
APL6P46682 YJR018WYJR018W 363 nt15.6■□□□□ 0.09
APL6P46682 ARE1YCR048W 1833 nt15.59■□□□□ 0.09
APL6P46682 PUN1YLR414C 792 nt15.56■□□□□ 0.08
APL6P46682 NPL3YDR432W 1245 nt15.53■□□□□ 0.08
APL6P46682 YGR021WYGR021W 873 nt15.45■□□□□ 0.06
APL6P46682 WWM1YFL010C 636 nt15.44■□□□□ 0.06
APL6P46682 YJR120WYJR120W 351 nt15.42■□□□□ 0.06
APL6P46682 YHR049C-AYHR049C-A 297 nt15.41■□□□□ 0.06
APL6P46682 HOM6YJR139C 1080 nt15.41■□□□□ 0.06
APL6P46682 RPP2BYDR382W 333 nt15.4■□□□□ 0.06
APL6P46682 MNP1YGL068W 585 nt15.4■□□□□ 0.06
APL6P46682 POA1YBR022W 534 nt15.32■□□□□ 0.04
APL6P46682 PTC2YER089C 1395 nt15.31■□□□□ 0.04
APL6P46682 YOL037CYOL037C 354 nt15.28■□□□□ 0.04
APL6P46682 RKM5YLR137W 1104 nt15.19■□□□□ 0.02
APL6P46682 YFL021C-AYFL021C-A 855 nt15.18■□□□□ 0.02
APL6P46682 BDH2YAL061W 1254 nt15.13■□□□□ 0.01
APL6P46682 BUD23YCR047C 828 nt15.1■□□□□ 0.01
APL6P46682 tM(CAU)CtM(CAU)C 72 nt15.08■□□□□ 0
APL6P46682 IMT4tM(CAU)E 72 nt15.08■□□□□ 0
APL6P46682 IMT3tM(CAU)J3 72 nt15.08■□□□□ 0
APL6P46682 IMT1tM(CAU)O1 72 nt15.08■□□□□ 0
APL6P46682 IMT2tM(CAU)P 72 nt15.08■□□□□ 0
APL6P46682 NAB2YGL122C 1578 nt15.05■□□□□ -0
APL6P46682 Q0182Q0182 405 nt15.01□□□□□ -0.01
APL6P46682 INM2YDR287W 879 nt14.99□□□□□ -0.01
APL6P46682 LSM3YLR438C-A 270 nt14.99□□□□□ -0.01
APL6P46682 FPR4YLR449W 1179 nt14.93□□□□□ -0.02
APL6P46682 YBL100CYBL100C 315 nt14.93□□□□□ -0.02
APL6P46682 DAL1YIR027C 1383 nt14.93□□□□□ -0.02
APL6P46682 BSC6YOL137W 1494 nt14.92□□□□□ -0.02
APL6P46682 MOT3YMR070W 1473 nt14.91□□□□□ -0.02
APL6P46682 FIS1YIL065C 468 nt14.88□□□□□ -0.03
APL6P46682 YLR281CYLR281C 468 nt14.88□□□□□ -0.03
APL6P46682 PUS2YGL063W 1113 nt14.87□□□□□ -0.03
APL6P46682 PHO4YFR034C 939 nt14.79□□□□□ -0.04
APL6P46682 TRM9YML014W 840 nt14.79□□□□□ -0.04
APL6P46682 WHI5YOR083W 888 nt14.79□□□□□ -0.04
APL6P46682 FUN26YAL022C 1554 nt14.75□□□□□ -0.05
APL6P46682 CCT6YDR188W 1641 nt14.61□□□□□ -0.07
APL6P46682 YLR154C-GYLR154C-G 150 nt14.53□□□□□ -0.08
APL6P46682 DSK2YMR276W 1122 nt14.53□□□□□ -0.08
APL6P46682 FMP45YDL222C 930 nt14.5□□□□□ -0.09
APL6P46682 YPR011CYPR011C 981 nt14.49□□□□□ -0.09
APL6P46682 ALF1YNL148C 765 nt14.48□□□□□ -0.09
APL6P46682 SUF2tP(AGG)C 72 nt14.47□□□□□ -0.09
Retrieved 100 of 7,029 protein–RNA pairs in 15.4 ms