RNA–Protein interactions for RNA: YPR065W

ROX1, Transcript of Heme-dependent repressor of hypoxic genes, yeastyeast

Gene ROX1, Length 1,107 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROX1YPR065W TY1A-AP0CX57 440 aa6.88□□□□□ -1.31
ROX1YPR065W TY1A-PR1P0CX58 440 aa6.88□□□□□ -1.31
ROX1YPR065W TY1A-ORP0CX59 440 aa6.88□□□□□ -1.31
ROX1YPR065W TY1A-PR2P0CX60 440 aa6.88□□□□□ -1.31
ROX1YPR065W TY1A-DR5P0CX65 440 aa6.88□□□□□ -1.31
ROX1YPR065W TY1A-ER2P0CX66 440 aa6.88□□□□□ -1.31
ROX1YPR065W TY1A-GR3P0CX67 440 aa6.88□□□□□ -1.31
ROX1YPR065W TY1A-LR1P0CX68 440 aa6.88□□□□□ -1.31
ROX1YPR065W TY1A-MR2P0CX69 440 aa6.88□□□□□ -1.31
ROX1YPR065W BDP1P46678 594 aa6.88□□□□□ -1.31
ROX1YPR065W TY1A-JR2P47099 440 aa6.88□□□□□ -1.31
ROX1YPR065W TY1A-DR1Q03856 440 aa6.88□□□□□ -1.31
ROX1YPR065W TY1A-ML1Q04706 440 aaKnown RBP6.88□□□□□ -1.31
ROX1YPR065W TY1A-BRQ12217 440 aa6.88□□□□□ -1.31
ROX1YPR065W TY1A-NL2Q12470 440 aa6.88□□□□□ -1.31
ROX1YPR065W TY1A-GR2Q12485 440 aa6.88□□□□□ -1.31
ROX1YPR065W REF2P42073 533 aaPredicted RBP6.84□□□□□ -1.31
ROX1YPR065W LCB5Q06147 687 aaKnown RBP6.84□□□□□ -1.31
ROX1YPR065W ORC6P38826 435 aa6.83□□□□□ -1.32
ROX1YPR065W RRN7P40992 514 aa6.83□□□□□ -1.32
ROX1YPR065W AFT1P22149 690 aa6.8□□□□□ -1.32
ROX1YPR065W MVP1P40959 511 aaKnown RBP6.8□□□□□ -1.32
ROX1YPR065W MAK21Q12176 1025 aaKnown RBP6.8□□□□□ -1.32
ROX1YPR065W YDL176WQ12027 708 aa6.79□□□□□ -1.32
ROX1YPR065W ASH1P34233 588 aa6.78□□□□□ -1.32
ROX1YPR065W HST3P53687 447 aa6.78□□□□□ -1.32
ROX1YPR065W YPR109WQ06104 294 aa6.76□□□□□ -1.33
ROX1YPR065W COX6P00427 148 aa6.75□□□□□ -1.33
ROX1YPR065W MTC5Q03897 1148 aa6.74□□□□□ -1.33
ROX1YPR065W YPR148CQ06523 435 aa6.74□□□□□ -1.33
ROX1YPR065W MET32Q12041 191 aa6.73□□□□□ -1.33
ROX1YPR065W RGR1P19263 1082 aa6.72□□□□□ -1.33
ROX1YPR065W RRD1P40454 393 aaKnown RBP6.72□□□□□ -1.33
ROX1YPR065W MOD5P07884 428 aa6.71□□□□□ -1.34
ROX1YPR065W YJR115WP47152 169 aa6.66□□□□□ -1.34
ROX1YPR065W KEX2P13134 814 aa6.65□□□□□ -1.34
ROX1YPR065W ACO2P39533 789 aa6.64□□□□□ -1.35
ROX1YPR065W PAC1P39946 494 aaKnown RBP6.63□□□□□ -1.35
ROX1YPR065W MSB3P48566 633 aaPredicted RBP6.63□□□□□ -1.35
ROX1YPR065W ERF2Q06551 359 aa6.62□□□□□ -1.35
ROX1YPR065W CLB5P30283 435 aa6.61□□□□□ -1.35
ROX1YPR065W RTF1P53064 558 aa6.61□□□□□ -1.35
ROX1YPR065W YLR346CQ06139 101 aa6.61□□□□□ -1.35
ROX1YPR065W TPD3P31383 635 aa6.59□□□□□ -1.35
ROX1YPR065W TUB4P53378 473 aa6.59□□□□□ -1.35
ROX1YPR065W AGE1Q04412 482 aa6.59□□□□□ -1.35
ROX1YPR065W PUS5Q06244 254 aa6.59□□□□□ -1.35
ROX1YPR065W TRK2P28584 889 aa6.58□□□□□ -1.36
ROX1YPR065W PSE1P32337 1089 aaKnown RBP6.57□□□□□ -1.36
ROX1YPR065W CAF120P53836 1060 aa6.57□□□□□ -1.36
ROX1YPR065W KXD1P53158 218 aa6.56□□□□□ -1.36
ROX1YPR065W RTT106P40161 455 aa6.55□□□□□ -1.36
ROX1YPR065W VPS70P47161 811 aa6.55□□□□□ -1.36
ROX1YPR065W SYH1Q02875 849 aaKnown RBP6.55□□□□□ -1.36
ROX1YPR065W YNL115CP53925 644 aa6.54□□□□□ -1.36
ROX1YPR065W YGR035CP53222 116 aa6.53□□□□□ -1.36
ROX1YPR065W OPT2Q06593 877 aa6.53□□□□□ -1.36
ROX1YPR065W UGA3P26370 528 aa6.52□□□□□ -1.37
ROX1YPR065W SRF1Q12516 437 aa6.52□□□□□ -1.37
ROX1YPR065W GLY1P37303 387 aaKnown RBP6.51□□□□□ -1.37
ROX1YPR065W HXT10P43581 546 aa6.5□□□□□ -1.37
ROX1YPR065W PTK2P47116 818 aaKnown RBP6.5□□□□□ -1.37
ROX1YPR065W NUP85P46673 744 aa6.49□□□□□ -1.37
ROX1YPR065W SIT4P20604 311 aa6.47□□□□□ -1.37
ROX1YPR065W SCW11P53189 542 aa6.45□□□□□ -1.38
ROX1YPR065W HPF1Q05164 967 aa6.45□□□□□ -1.38
ROX1YPR065W ICP55P40051 511 aa6.44□□□□□ -1.38
ROX1YPR065W TYW1Q08960 810 aaKnown RBP6.44□□□□□ -1.38
ROX1YPR065W YPR204WQ08995 1032 aa6.44□□□□□ -1.38
ROX1YPR065W MIP1P15801 1254 aa6.43□□□□□ -1.38
ROX1YPR065W CKB1P43639 278 aa6.43□□□□□ -1.38
ROX1YPR065W MRT4P33201 236 aaKnown RBP6.42□□□□□ -1.38
ROX1YPR065W YIR007WP40566 764 aa6.42□□□□□ -1.38
ROX1YPR065W PDC1P06169 563 aaKnown RBP6.41□□□□□ -1.38
ROX1YPR065W TY1A-BLQ12266 440 aa6.41□□□□□ -1.38
ROX1YPR065W KIP2P28743 706 aa6.4□□□□□ -1.38
ROX1YPR065W PBS2P08018 668 aa6.39□□□□□ -1.39
ROX1YPR065W TEA1P47988 759 aa6.38□□□□□ -1.39
ROX1YPR065W UBP2Q01476 1272 aa6.38□□□□□ -1.39
ROX1YPR065W ALR1Q08269 859 aa6.38□□□□□ -1.39
ROX1YPR065W PUS1Q12211 544 aaKnown RBP6.38□□□□□ -1.39
ROX1YPR065W RPA14P50106 137 aa6.37□□□□□ -1.39
ROX1YPR065W DPH6Q12429 685 aa6.37□□□□□ -1.39
ROX1YPR065W IXR1P33417 597 aa6.36□□□□□ -1.39
ROX1YPR065W LSC2P53312 427 aa6.36□□□□□ -1.39
ROX1YPR065W YPR097WQ06839 1073 aa6.35□□□□□ -1.39
ROX1YPR065W ARG82P07250 355 aa6.34□□□□□ -1.39
ROX1YPR065W PHM7Q12252 991 aa6.34□□□□□ -1.39
ROX1YPR065W MAM3Q12296 706 aa6.33□□□□□ -1.4
ROX1YPR065W LSB3P43603 459 aaKnown RBP6.32□□□□□ -1.4
ROX1YPR065W PUS6P53294 404 aa6.32□□□□□ -1.4
ROX1YPR065W NIS1P53939 407 aa6.32□□□□□ -1.4
ROX1YPR065W SLY41P22215 453 aa6.31□□□□□ -1.4
ROX1YPR065W TBF1Q02457 562 aa6.3□□□□□ -1.4
ROX1YPR065W BUB1P41695 1021 aaKnown RBP RIP-Chip data6.29□□□□□ -1.4not detected
ROX1YPR065W LYS5P50113 272 aa6.29□□□□□ -1.4
ROX1YPR065W AAD14P42884 376 aa6.28□□□□□ -1.4
ROX1YPR065W YDL206WQ12424 762 aa6.27□□□□□ -1.41
ROX1YPR065W YMR196WQ04336 1088 aa6.26□□□□□ -1.41
ROX1YPR065W ROG3P43602 733 aa6.25□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 31.4 ms