RNA–Protein interactions for RNA: YPR065W

ROX1, Transcript of Heme-dependent repressor of hypoxic genes, yeastyeast

Gene ROX1, Length 1,107 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROX1YPR065W MTC1P47018 478 aaKnown RBP13.94□□□□□ -0.18
ROX1YPR065W FAP1P53971 965 aa13.55□□□□□ -0.24
ROX1YPR065W PRY3P47033 881 aa12.75□□□□□ -0.37
ROX1YPR065W AAD16Q02895 342 aa12.35□□□□□ -0.43
ROX1YPR065W PRI1P10363 409 aa12.28□□□□□ -0.44
ROX1YPR065W HAA1Q12753 694 aaKnown RBP12.04□□□□□ -0.48
ROX1YPR065W DRS1P32892 752 aaKnown RBP12.03□□□□□ -0.48
ROX1YPR065W YCK3P39962 524 aa11.94□□□□□ -0.5
ROX1YPR065W ISW2Q08773 1120 aa11.81□□□□□ -0.52
ROX1YPR065W RPG1P38249 964 aaKnown RBP11.63□□□□□ -0.55
ROX1YPR065W TSR3Q12094 313 aaKnown RBP11.48□□□□□ -0.57
ROX1YPR065W MRPL32P25348 183 aa11.15□□□□□ -0.62
ROX1YPR065W YGL015CP33199 130 aa11.01□□□□□ -0.65
ROX1YPR065W DIP2Q12220 943 aaPredicted RBP10.91□□□□□ -0.66
ROX1YPR065W RSE1Q04693 1361 aaKnown RBP10.85□□□□□ -0.67
ROX1YPR065W REB1P21538 810 aa10.59□□□□□ -0.71
ROX1YPR065W RPL17AP05740 184 aaKnown RBP10.51□□□□□ -0.73
ROX1YPR065W RPL17BP46990 184 aaKnown RBP10.51□□□□□ -0.73
ROX1YPR065W BUD31P25337 157 aaPredicted RBP10.46□□□□□ -0.73
ROX1YPR065W CDC27P38042 758 aa10.3□□□□□ -0.76
ROX1YPR065W UBP10P53874 792 aaPredicted RBP10.29□□□□□ -0.76
ROX1YPR065W AVT3P36062 692 aa10.25□□□□□ -0.77
ROX1YPR065W MAP2P38174 421 aaKnown RBP10.12□□□□□ -0.79
ROX1YPR065W YKR023WP36119 530 aaKnown RBP10.08□□□□□ -0.8
ROX1YPR065W SPT21P35209 758 aa9.99□□□□□ -0.81
ROX1YPR065W TIF4632P39936 914 aaKnown RBP9.91□□□□□ -0.82
ROX1YPR065W TFC8Q12308 588 aa9.91□□□□□ -0.82
ROX1YPR065W UBP9P39967 754 aa9.9□□□□□ -0.82
ROX1YPR065W TGL3P40308 642 aa9.87□□□□□ -0.83
ROX1YPR065W SIS1P25294 352 aaKnown RBP9.86□□□□□ -0.83
ROX1YPR065W HOP09932 586 aa9.83□□□□□ -0.84
ROX1YPR065W SLX5P32828 619 aaKnown RBP9.76□□□□□ -0.85
ROX1YPR065W DCD1P06773 312 aa9.75□□□□□ -0.85
ROX1YPR065W SCY1P53009 804 aa9.75□□□□□ -0.85
ROX1YPR065W BFR2Q06631 534 aaKnown RBP9.57□□□□□ -0.88
ROX1YPR065W BCH2P36122 765 aa9.53□□□□□ -0.88
ROX1YPR065W RIM101P33400 625 aa9.48□□□□□ -0.89
ROX1YPR065W MST1P07236 462 aa9.35□□□□□ -0.91
ROX1YPR065W YOR238WQ08634 303 aa9.25□□□□□ -0.93
ROX1YPR065W EPS1P40557 701 aa9.23□□□□□ -0.93
ROX1YPR065W BDF1P35817 686 aa9.22□□□□□ -0.93
ROX1YPR065W YBL029C-AQ3E756 94 aa9.21□□□□□ -0.94
ROX1YPR065W NSR1P27476 414 aaKnown RBP RIP-Chip data9.19□□□□□ -0.94not detected
ROX1YPR065W VNX1P42839 908 aa9.15□□□□□ -0.94
ROX1YPR065W OXP1P28273 1286 aa9.06□□□□□ -0.96
ROX1YPR065W SPP1Q03012 353 aa9.06□□□□□ -0.96
ROX1YPR065W YAP5P40574 245 aa9.05□□□□□ -0.96
ROX1YPR065W YIL055CP40523 627 aaKnown RBP9.03□□□□□ -0.96
ROX1YPR065W YJL171CP46992 396 aa9□□□□□ -0.97
ROX1YPR065W PTP3P40048 928 aa8.99□□□□□ -0.97
ROX1YPR065W BBC1P47068 1157 aa8.99□□□□□ -0.97
ROX1YPR065W AIR2Q12476 344 aaKnown RBP8.96□□□□□ -0.98
ROX1YPR065W TIF11P38912 153 aaKnown RBP8.94□□□□□ -0.98
ROX1YPR065W FKH1P40466 484 aa8.93□□□□□ -0.98
ROX1YPR065W WSC3Q12215 556 aa8.93□□□□□ -0.98
ROX1YPR065W RSM7P47150 247 aa8.88□□□□□ -0.99
ROX1YPR065W GTT3P39996 337 aa8.87□□□□□ -0.99
ROX1YPR065W AI2P03876 854 aa8.84□□□□□ -0.99
ROX1YPR065W BMT6Q12291 365 aa8.79□□□□□ -1
ROX1YPR065W LDB19Q12502 818 aa8.77□□□□□ -1.01
ROX1YPR065W ULI1P43604 169 aa8.76□□□□□ -1.01
ROX1YPR065W IOC2Q12072 812 aa8.75□□□□□ -1.01
ROX1YPR065W MSB4Q12317 492 aa8.7□□□□□ -1.02
ROX1YPR065W EAP1P36041 632 aaKnown RBP8.69□□□□□ -1.02
ROX1YPR065W YAH1Q12184 172 aaKnown RBP8.63□□□□□ -1.03
ROX1YPR065W NCR1Q12200 1170 aa8.56□□□□□ -1.04
ROX1YPR065W RTG1P32607 177 aa8.54□□□□□ -1.04
ROX1YPR065W PIB1Q06651 286 aa8.53□□□□□ -1.04
ROX1YPR065W SEC61P32915 480 aa8.52□□□□□ -1.05
ROX1YPR065W PSD2P53037 1138 aaKnown RBP8.51□□□□□ -1.05
ROX1YPR065W YNL035CP53962 389 aaKnown RBP8.5□□□□□ -1.05
ROX1YPR065W YLR271WQ06152 274 aa8.5□□□□□ -1.05
ROX1YPR065W YOL036WQ08206 761 aa8.49□□□□□ -1.05
ROX1YPR065W TRP5P00931 707 aaKnown RBP8.48□□□□□ -1.05
ROX1YPR065W SET4P42948 560 aa8.45□□□□□ -1.06
ROX1YPR065W MRM1P25270 412 aa8.44□□□□□ -1.06
ROX1YPR065W TFG1P41895 735 aaPredicted RBP8.43□□□□□ -1.06
ROX1YPR065W TFA1P36100 482 aa8.41□□□□□ -1.06
ROX1YPR065W YMR1P47147 688 aaKnown RBP RIP-Chip data8.41□□□□□ -1.06not detected
ROX1YPR065W SAM3Q08986 587 aa8.38□□□□□ -1.07
ROX1YPR065W DBP1P24784 617 aaKnown RBP8.35□□□□□ -1.07
ROX1YPR065W BCK2P33306 851 aa8.35□□□□□ -1.07
ROX1YPR065W JIP4Q03361 876 aa8.34□□□□□ -1.07
ROX1YPR065W ABP1P15891 592 aaKnown RBP8.33□□□□□ -1.08
ROX1YPR065W VMA1P17255 1071 aaKnown RBP8.33□□□□□ -1.08
ROX1YPR065W CHL1P22516 861 aaPredicted RBP8.32□□□□□ -1.08
ROX1YPR065W VPS29P38759 282 aa8.31□□□□□ -1.08
ROX1YPR065W ARP8Q12386 881 aaKnown RBP RIP-Chip data8.31□□□□□ -1.08not detected
ROX1YPR065W RTG3P38165 486 aa8.29□□□□□ -1.08
ROX1YPR065W DAN4P47179 1161 aa8.28□□□□□ -1.08
ROX1YPR065W YDL129WQ07555 291 aa8.28□□□□□ -1.08
ROX1YPR065W SAP30P38429 201 aa8.27□□□□□ -1.09
ROX1YPR065W PRE3P38624 215 aa8.24□□□□□ -1.09
ROX1YPR065W YFR006WP43590 535 aa8.22□□□□□ -1.09
ROX1YPR065W STS1P38637 319 aa8.21□□□□□ -1.1
ROX1YPR065W SSP1P38871 571 aa8.21□□□□□ -1.1
ROX1YPR065W PTC4P38089 393 aa8.19□□□□□ -1.1
ROX1YPR065W HTA1P04911 132 aaKnown RBP8.18□□□□□ -1.1
ROX1YPR065W HTA2P04912 132 aa8.18□□□□□ -1.1
ROX1YPR065W GYP5Q12344 894 aa8.18□□□□□ -1.1
Retrieved 100 of 5,963 RNA–protein pairs in 28.1 ms