RNA–Protein interactions for RNA: YNR001C

CIT1, Transcript of Citrate synthase, yeastyeast

Gene CIT1, Length 1,440 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CIT1YNR001C TY1A-ORP0CX59 440 aa6.5□□□□□ -1.37
CIT1YNR001C TY1A-PR2P0CX60 440 aa6.5□□□□□ -1.37
CIT1YNR001C TY1A-DR5P0CX65 440 aa6.5□□□□□ -1.37
CIT1YNR001C TY1A-ER2P0CX66 440 aa6.5□□□□□ -1.37
CIT1YNR001C TY1A-GR3P0CX67 440 aa6.5□□□□□ -1.37
CIT1YNR001C TY1A-LR1P0CX68 440 aa6.5□□□□□ -1.37
CIT1YNR001C TY1A-MR2P0CX69 440 aa6.5□□□□□ -1.37
CIT1YNR001C TY1A-JR2P47099 440 aa6.5□□□□□ -1.37
CIT1YNR001C TY1A-DR1Q03856 440 aa6.5□□□□□ -1.37
CIT1YNR001C TY1A-ML1Q04706 440 aaKnown RBP6.5□□□□□ -1.37
CIT1YNR001C TY1A-BRQ12217 440 aa6.5□□□□□ -1.37
CIT1YNR001C TY1A-NL2Q12470 440 aa6.5□□□□□ -1.37
CIT1YNR001C TY1A-GR2Q12485 440 aa6.5□□□□□ -1.37
CIT1YNR001C YPR109WQ06104 294 aa6.49□□□□□ -1.37
CIT1YNR001C SEC2P17065 759 aa6.48□□□□□ -1.37
CIT1YNR001C DSF2P38213 736 aa6.48□□□□□ -1.37
CIT1YNR001C BRE2P43132 505 aa6.47□□□□□ -1.37
CIT1YNR001C ERG12P07277 443 aa6.46□□□□□ -1.38
CIT1YNR001C MAM3Q12296 706 aa6.45□□□□□ -1.38
CIT1YNR001C IES2P40154 320 aa6.44□□□□□ -1.38
CIT1YNR001C NUP42P49686 430 aaKnown RBP6.44□□□□□ -1.38
CIT1YNR001C GCR2Q01722 534 aa6.44□□□□□ -1.38
CIT1YNR001C PSE1P32337 1089 aaKnown RBP6.43□□□□□ -1.38
CIT1YNR001C ERF2Q06551 359 aa6.42□□□□□ -1.38
CIT1YNR001C GCD11P32481 527 aaKnown RBP6.41□□□□□ -1.38
CIT1YNR001C AIR1P40507 360 aaKnown RBP6.41□□□□□ -1.38
CIT1YNR001C CST6P40535 587 aa6.41□□□□□ -1.38
CIT1YNR001C NPL4P33755 580 aa6.39□□□□□ -1.39
CIT1YNR001C LAM6Q08001 693 aa6.39□□□□□ -1.39
CIT1YNR001C KEX2P13134 814 aa6.38□□□□□ -1.39
CIT1YNR001C DIT2P21595 489 aa6.38□□□□□ -1.39
CIT1YNR001C CLA4P48562 842 aa6.37□□□□□ -1.39
CIT1YNR001C CDC4P07834 779 aa6.35□□□□□ -1.39
CIT1YNR001C SPB4P25808 606 aaPredicted RBP6.35□□□□□ -1.39
CIT1YNR001C GAR1P28007 205 aaKnown RBP6.35□□□□□ -1.39
CIT1YNR001C SPT16P32558 1035 aaKnown RBP6.35□□□□□ -1.39
CIT1YNR001C GBP2P25555 427 aaKnown RBP RIP-Chip data6.34□□□□□ -1.39not detected
CIT1YNR001C SPA2P23201 1466 aaKnown RBP6.34□□□□□ -1.39
CIT1YNR001C RRN7P40992 514 aa6.33□□□□□ -1.4
CIT1YNR001C AGE1Q04412 482 aa6.33□□□□□ -1.4
CIT1YNR001C CLB5P30283 435 aa6.32□□□□□ -1.4
CIT1YNR001C SIT4P20604 311 aa6.31□□□□□ -1.4
CIT1YNR001C NIS1P53939 407 aa6.31□□□□□ -1.4
CIT1YNR001C PAC1P39946 494 aaKnown RBP6.3□□□□□ -1.4
CIT1YNR001C FRK1Q03002 865 aaPredicted RBP6.3□□□□□ -1.4
CIT1YNR001C TEA1P47988 759 aa6.29□□□□□ -1.4
CIT1YNR001C HED1Q03937 162 aa6.29□□□□□ -1.4
CIT1YNR001C ENV9Q08651 330 aa6.29□□□□□ -1.4
CIT1YNR001C PAT1P25644 796 aaKnown RBP6.28□□□□□ -1.4
CIT1YNR001C MET22P32179 357 aa6.28□□□□□ -1.4
CIT1YNR001C BDP1P46678 594 aa6.28□□□□□ -1.4
CIT1YNR001C TUB4P53378 473 aa6.27□□□□□ -1.41
CIT1YNR001C MOD5P07884 428 aa6.26□□□□□ -1.41
CIT1YNR001C RTF1P53064 558 aa6.26□□□□□ -1.41
CIT1YNR001C YNL115CP53925 644 aa6.26□□□□□ -1.41
CIT1YNR001C LEU3P08638 886 aa6.24□□□□□ -1.41
CIT1YNR001C FPK1P53739 893 aa6.24□□□□□ -1.41
CIT1YNR001C YDR444WQ04093 687 aa6.22□□□□□ -1.41
CIT1YNR001C KOG1P38873 1557 aa6.2□□□□□ -1.42
CIT1YNR001C SCJ1P25303 377 aa6.19□□□□□ -1.42
CIT1YNR001C GLC3P32775 704 aa6.19□□□□□ -1.42
CIT1YNR001C YNR021WP53723 404 aaKnown RBP6.18□□□□□ -1.42
CIT1YNR001C LCB5Q06147 687 aaKnown RBP6.18□□□□□ -1.42
CIT1YNR001C AFT1P22149 690 aa6.17□□□□□ -1.42
CIT1YNR001C SLY41P22215 453 aa6.17□□□□□ -1.42
CIT1YNR001C PUS5Q06244 254 aa6.17□□□□□ -1.42
CIT1YNR001C PDC1P06169 563 aaKnown RBP6.16□□□□□ -1.42
CIT1YNR001C ASH1P34233 588 aa6.16□□□□□ -1.42
CIT1YNR001C HST2P53686 357 aa6.16□□□□□ -1.42
CIT1YNR001C YMR196WQ04336 1088 aa6.16□□□□□ -1.42
CIT1YNR001C YDL176WQ12027 708 aa6.16□□□□□ -1.42
CIT1YNR001C MET32Q12041 191 aa6.16□□□□□ -1.42
CIT1YNR001C TPD3P31383 635 aa6.14□□□□□ -1.43
CIT1YNR001C ATF2P53296 535 aa6.14□□□□□ -1.43
CIT1YNR001C HST3P53687 447 aa6.13□□□□□ -1.43
CIT1YNR001C RRD1P40454 393 aaKnown RBP6.12□□□□□ -1.43
CIT1YNR001C HXT10P43581 546 aa6.12□□□□□ -1.43
CIT1YNR001C TYW1Q08960 810 aaKnown RBP6.12□□□□□ -1.43
CIT1YNR001C TRM1P15565 570 aaKnown RBP6.11□□□□□ -1.43
CIT1YNR001C ESS1P22696 170 aa6.11□□□□□ -1.43
CIT1YNR001C KTR1P27810 393 aaKnown RBP6.11□□□□□ -1.43
CIT1YNR001C MMP1Q12372 583 aa6.11□□□□□ -1.43
CIT1YNR001C YJU3P28321 313 aa6.1□□□□□ -1.43
CIT1YNR001C KXD1P53158 218 aa6.1□□□□□ -1.43
CIT1YNR001C PUS6P53294 404 aa6.1□□□□□ -1.43
CIT1YNR001C YDL206WQ12424 762 aa6.1□□□□□ -1.43
CIT1YNR001C GLN1P32288 370 aaKnown RBP6.08□□□□□ -1.44
CIT1YNR001C RPA14P50106 137 aa6.08□□□□□ -1.44
CIT1YNR001C AIM7Q12156 149 aa6.08□□□□□ -1.44
CIT1YNR001C RSC30P38781 883 aa6.07□□□□□ -1.44
CIT1YNR001C BUB1P41695 1021 aaKnown RBP RIP-Chip data6.07□□□□□ -1.44not detected
CIT1YNR001C DMA2P53924 522 aa6.07□□□□□ -1.44
CIT1YNR001C YPR097WQ06839 1073 aa6.07□□□□□ -1.44
CIT1YNR001C SWR1Q05471 1514 aa6.06□□□□□ -1.44
CIT1YNR001C RPN1P38764 993 aaKnown RBP6.06□□□□□ -1.44
CIT1YNR001C YJR115WP47152 169 aa6.06□□□□□ -1.44
CIT1YNR001C TBF1Q02457 562 aa6.05□□□□□ -1.44
CIT1YNR001C ALR1Q08269 859 aa6.04□□□□□ -1.44
CIT1YNR001C MSB3P48566 633 aaPredicted RBP6.03□□□□□ -1.44
CIT1YNR001C SYH1Q02875 849 aaKnown RBP6.01□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 11.4 ms