RNA–Protein interactions for RNA: YMR025W

CSI1, Transcript of Subunit of the Cop9 signalosome, yeastyeast

Gene CSI1, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSI1YMR025W TY1A-JR2P47099 440 aa9.97□□□□□ -0.81
CSI1YMR025W TY1A-DR1Q03856 440 aa9.97□□□□□ -0.81
CSI1YMR025W TY1A-ML1Q04706 440 aaKnown RBP9.97□□□□□ -0.81
CSI1YMR025W TY1A-BRQ12217 440 aa9.97□□□□□ -0.81
CSI1YMR025W TY1A-NL2Q12470 440 aa9.97□□□□□ -0.81
CSI1YMR025W TY1A-GR2Q12485 440 aa9.97□□□□□ -0.81
CSI1YMR025W SEC2P17065 759 aa9.96□□□□□ -0.82
CSI1YMR025W MAM3Q12296 706 aa9.94□□□□□ -0.82
CSI1YMR025W PSE1P32337 1089 aaKnown RBP9.92□□□□□ -0.82
CSI1YMR025W ERG12P07277 443 aa9.91□□□□□ -0.82
CSI1YMR025W DSF2P38213 736 aa9.91□□□□□ -0.82
CSI1YMR025W TRK1P12685 1235 aa9.9□□□□□ -0.82
CSI1YMR025W SPT16P32558 1035 aaKnown RBP9.89□□□□□ -0.83
CSI1YMR025W IES2P40154 320 aa9.88□□□□□ -0.83
CSI1YMR025W KEX2P13134 814 aa9.86□□□□□ -0.83
CSI1YMR025W CST6P40535 587 aa9.86□□□□□ -0.83
CSI1YMR025W RRN7P40992 514 aa9.85□□□□□ -0.83
CSI1YMR025W ERF2Q06551 359 aa9.85□□□□□ -0.83
CSI1YMR025W CLB5P30283 435 aa9.82□□□□□ -0.84
CSI1YMR025W SPB4P25808 606 aaPredicted RBP9.81□□□□□ -0.84
CSI1YMR025W NUP42P49686 430 aaKnown RBP9.81□□□□□ -0.84
CSI1YMR025W PAT1P25644 796 aaKnown RBP9.8□□□□□ -0.84
CSI1YMR025W LAM6Q08001 693 aa9.8□□□□□ -0.84
CSI1YMR025W CLA4P48562 842 aa9.78□□□□□ -0.84
CSI1YMR025W FRK1Q03002 865 aaPredicted RBP9.78□□□□□ -0.84
CSI1YMR025W AIR1P40507 360 aaKnown RBP9.76□□□□□ -0.85
CSI1YMR025W DIT2P21595 489 aa9.74□□□□□ -0.85
CSI1YMR025W BDP1P46678 594 aa9.74□□□□□ -0.85
CSI1YMR025W TEA1P47988 759 aa9.73□□□□□ -0.85
CSI1YMR025W PAC1P39946 494 aaKnown RBP9.72□□□□□ -0.85
CSI1YMR025W RTF1P53064 558 aa9.7□□□□□ -0.86
CSI1YMR025W AGE1Q04412 482 aa9.7□□□□□ -0.86
CSI1YMR025W SIT4P20604 311 aa9.69□□□□□ -0.86
CSI1YMR025W TUB4P53378 473 aa9.69□□□□□ -0.86
CSI1YMR025W YNL115CP53925 644 aa9.68□□□□□ -0.86
CSI1YMR025W NIS1P53939 407 aa9.68□□□□□ -0.86
CSI1YMR025W MOD5P07884 428 aa9.64□□□□□ -0.87
CSI1YMR025W CDC4P07834 779 aa9.63□□□□□ -0.87
CSI1YMR025W BRE2P43132 505 aa9.63□□□□□ -0.87
CSI1YMR025W HED1Q03937 162 aa9.62□□□□□ -0.87
CSI1YMR025W FPK1P53739 893 aa9.59□□□□□ -0.87
CSI1YMR025W GCR2Q01722 534 aa9.57□□□□□ -0.88
CSI1YMR025W YMR196WQ04336 1088 aa9.57□□□□□ -0.88
CSI1YMR025W PUS5Q06244 254 aa9.56□□□□□ -0.88
CSI1YMR025W SLY41P22215 453 aa9.55□□□□□ -0.88
CSI1YMR025W RGA1P39083 1007 aa9.55□□□□□ -0.88
CSI1YMR025W KXD1P53158 218 aa9.52□□□□□ -0.89
CSI1YMR025W MET32Q12041 191 aa9.51□□□□□ -0.89
CSI1YMR025W ATF2P53296 535 aa9.5□□□□□ -0.89
CSI1YMR025W SCJ1P25303 377 aa9.48□□□□□ -0.89
CSI1YMR025W TPD3P31383 635 aa9.48□□□□□ -0.89
CSI1YMR025W HXT10P43581 546 aa9.48□□□□□ -0.89
CSI1YMR025W PDC1P06169 563 aaKnown RBP9.47□□□□□ -0.89
CSI1YMR025W ASH1P34233 588 aa9.47□□□□□ -0.89
CSI1YMR025W HST2P53686 357 aa9.47□□□□□ -0.89
CSI1YMR025W YNR021WP53723 404 aaKnown RBP9.47□□□□□ -0.89
CSI1YMR025W RRD1P40454 393 aaKnown RBP9.46□□□□□ -0.9
CSI1YMR025W GLC3P32775 704 aa9.45□□□□□ -0.9
CSI1YMR025W PUS6P53294 404 aa9.45□□□□□ -0.9
CSI1YMR025W AFT1P22149 690 aa9.43□□□□□ -0.9
CSI1YMR025W GAR1P28007 205 aaKnown RBP9.43□□□□□ -0.9
CSI1YMR025W TBF1Q02457 562 aa9.43□□□□□ -0.9
CSI1YMR025W MMP1Q12372 583 aa9.43□□□□□ -0.9
CSI1YMR025W YDL206WQ12424 762 aa9.43□□□□□ -0.9
CSI1YMR025W HST3P53687 447 aa9.42□□□□□ -0.9
CSI1YMR025W TRM1P15565 570 aaKnown RBP9.41□□□□□ -0.9
CSI1YMR025W RPA14P50106 137 aa9.41□□□□□ -0.9
CSI1YMR025W MET22P32179 357 aa9.4□□□□□ -0.9
CSI1YMR025W GLN1P32288 370 aaKnown RBP9.4□□□□□ -0.9
CSI1YMR025W ALR1Q08269 859 aa9.4□□□□□ -0.9
CSI1YMR025W SYH1Q02875 849 aaKnown RBP9.39□□□□□ -0.91
CSI1YMR025W RGA2Q06407 1009 aa9.39□□□□□ -0.91
CSI1YMR025W YPR097WQ06839 1073 aa9.39□□□□□ -0.91
CSI1YMR025W ESS1P22696 170 aa9.38□□□□□ -0.91
CSI1YMR025W BUB1P41695 1021 aaKnown RBP RIP-Chip data9.38□□□□□ -0.91not detected
CSI1YMR025W YPL062WQ02781 134 aa9.38□□□□□ -0.91
CSI1YMR025W RQC2Q12532 1038 aaKnown RBP9.38□□□□□ -0.91
CSI1YMR025W GBP2P25555 427 aaKnown RBP RIP-Chip data9.36□□□□□ -0.91not detected
CSI1YMR025W ENV9Q08651 330 aa9.36□□□□□ -0.91
CSI1YMR025W TYW1Q08960 810 aaKnown RBP9.35□□□□□ -0.91
CSI1YMR025W YJU3P28321 313 aa9.33□□□□□ -0.92
CSI1YMR025W KIP2P28743 706 aa9.32□□□□□ -0.92
CSI1YMR025W YJR115WP47152 169 aa9.32□□□□□ -0.92
CSI1YMR025W YDR444WQ04093 687 aa9.32□□□□□ -0.92
CSI1YMR025W AIM7Q12156 149 aa9.31□□□□□ -0.92
CSI1YMR025W KTR1P27810 393 aaKnown RBP9.29□□□□□ -0.92
CSI1YMR025W IXR1P33417 597 aa9.29□□□□□ -0.92
CSI1YMR025W MSB3P48566 633 aaPredicted RBP9.29□□□□□ -0.92
CSI1YMR025W RSC30P38781 883 aa9.26□□□□□ -0.93
CSI1YMR025W LCB5Q06147 687 aaKnown RBP9.26□□□□□ -0.93
CSI1YMR025W PKH3Q03306 898 aaPredicted RBP9.25□□□□□ -0.93
CSI1YMR025W UGA3P26370 528 aa9.24□□□□□ -0.93
CSI1YMR025W CSN12P47130 423 aa9.23□□□□□ -0.93
CSI1YMR025W MRT4P33201 236 aaKnown RBP9.22□□□□□ -0.93
CSI1YMR025W VAC17P25591 423 aa9.2□□□□□ -0.94
CSI1YMR025W ARG8P18544 423 aa9.19□□□□□ -0.94
CSI1YMR025W PTK2P47116 818 aaKnown RBP9.19□□□□□ -0.94
CSI1YMR025W SRF1Q12516 437 aa9.17□□□□□ -0.94
CSI1YMR025W YDL176WQ12027 708 aa9.16□□□□□ -0.94
CSI1YMR025W ITT1Q04638 464 aa9.14□□□□□ -0.95
Retrieved 100 of 5,963 RNA–protein pairs in 179.3 ms