RNA–Protein interactions for RNA: YML112W

CTK3, Transcript of Gamma subunit of C-terminal domain kinase I, yeastyeast

Gene CTK3, Length 891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK3YML112W TY1A-DR5P0CX65 440 aa6.54□□□□□ -1.36
CTK3YML112W TY1A-ER2P0CX66 440 aa6.54□□□□□ -1.36
CTK3YML112W TY1A-GR3P0CX67 440 aa6.54□□□□□ -1.36
CTK3YML112W TY1A-LR1P0CX68 440 aa6.54□□□□□ -1.36
CTK3YML112W TY1A-MR2P0CX69 440 aa6.54□□□□□ -1.36
CTK3YML112W TY1A-JR2P47099 440 aa6.54□□□□□ -1.36
CTK3YML112W TY1A-DR1Q03856 440 aa6.54□□□□□ -1.36
CTK3YML112W TY1A-ML1Q04706 440 aaKnown RBP6.54□□□□□ -1.36
CTK3YML112W MAK21Q12176 1025 aaKnown RBP6.54□□□□□ -1.36
CTK3YML112W TY1A-BRQ12217 440 aa6.54□□□□□ -1.36
CTK3YML112W TY1A-NL2Q12470 440 aa6.54□□□□□ -1.36
CTK3YML112W TY1A-GR2Q12485 440 aa6.54□□□□□ -1.36
CTK3YML112W PBS2P08018 668 aa6.53□□□□□ -1.36
CTK3YML112W NUD1P32336 851 aa6.53□□□□□ -1.36
CTK3YML112W RPP1BP10622 106 aaKnown RBP6.51□□□□□ -1.37
CTK3YML112W SEC2P17065 759 aa6.51□□□□□ -1.37
CTK3YML112W BDP1P46678 594 aa6.51□□□□□ -1.37
CTK3YML112W SPB4P25808 606 aaPredicted RBP6.48□□□□□ -1.37
CTK3YML112W LCB5Q06147 687 aaKnown RBP6.47□□□□□ -1.37
CTK3YML112W GCD11P32481 527 aaKnown RBP6.45□□□□□ -1.38
CTK3YML112W SPT16P32558 1035 aaKnown RBP6.45□□□□□ -1.38
CTK3YML112W DSF2P38213 736 aa6.45□□□□□ -1.38
CTK3YML112W PEX21P50091 288 aa6.45□□□□□ -1.38
CTK3YML112W TUM1Q08686 304 aaKnown RBP6.45□□□□□ -1.38
CTK3YML112W GAP1P19145 602 aaPredicted RBP6.44□□□□□ -1.38
CTK3YML112W ORC6P38826 435 aa6.44□□□□□ -1.38
CTK3YML112W CSC1Q06538 782 aa6.44□□□□□ -1.38
CTK3YML112W MAM3Q12296 706 aa6.43□□□□□ -1.38
CTK3YML112W TFB4Q12004 338 aa6.42□□□□□ -1.38
CTK3YML112W RRN7P40992 514 aa6.41□□□□□ -1.38
CTK3YML112W HED1Q03937 162 aa6.41□□□□□ -1.38
CTK3YML112W MET32Q12041 191 aa6.41□□□□□ -1.38
CTK3YML112W MVP1P40959 511 aaKnown RBP6.4□□□□□ -1.38
CTK3YML112W MTC5Q03897 1148 aa6.39□□□□□ -1.39
CTK3YML112W RGR1P19263 1082 aa6.38□□□□□ -1.39
CTK3YML112W NPL4P33755 580 aa6.38□□□□□ -1.39
CTK3YML112W ASH1P34233 588 aa6.38□□□□□ -1.39
CTK3YML112W IES2P40154 320 aa6.38□□□□□ -1.39
CTK3YML112W NUP42P49686 430 aaKnown RBP6.36□□□□□ -1.39
CTK3YML112W YPR109WQ06104 294 aa6.36□□□□□ -1.39
CTK3YML112W PSE1P32337 1089 aaKnown RBP6.35□□□□□ -1.39
CTK3YML112W RRD1P40454 393 aaKnown RBP6.35□□□□□ -1.39
CTK3YML112W DIT2P21595 489 aa6.34□□□□□ -1.39
CTK3YML112W AFT1P22149 690 aa6.31□□□□□ -1.4
CTK3YML112W CAF120P53836 1060 aa6.3□□□□□ -1.4
CTK3YML112W YJR115WP47152 169 aa6.28□□□□□ -1.4
CTK3YML112W HST3P53687 447 aa6.27□□□□□ -1.41
CTK3YML112W PUS5Q06244 254 aa6.27□□□□□ -1.41
CTK3YML112W ERF2Q06551 359 aa6.27□□□□□ -1.41
CTK3YML112W CLB5P30283 435 aa6.26□□□□□ -1.41
CTK3YML112W TEA1P47988 759 aa6.26□□□□□ -1.41
CTK3YML112W PAC1P39946 494 aaKnown RBP6.24□□□□□ -1.41
CTK3YML112W MOD5P07884 428 aa6.23□□□□□ -1.41
CTK3YML112W PAT1P25644 796 aaKnown RBP6.23□□□□□ -1.41
CTK3YML112W KEX2P13134 814 aa6.22□□□□□ -1.41
CTK3YML112W ATF2P53296 535 aa6.22□□□□□ -1.41
CTK3YML112W YNR021WP53723 404 aaKnown RBP6.22□□□□□ -1.41
CTK3YML112W TRK2P28584 889 aa6.2□□□□□ -1.42
CTK3YML112W ACO2P39533 789 aa6.2□□□□□ -1.42
CTK3YML112W GLC3P32775 704 aa6.19□□□□□ -1.42
CTK3YML112W SIT4P20604 311 aa6.18□□□□□ -1.42
CTK3YML112W NIS1P53939 407 aa6.18□□□□□ -1.42
CTK3YML112W LEU3P08638 886 aa6.16□□□□□ -1.42
CTK3YML112W YGR035CP53222 116 aa6.16□□□□□ -1.42
CTK3YML112W YNL115CP53925 644 aa6.16□□□□□ -1.42
CTK3YML112W RTF1P53064 558 aa6.15□□□□□ -1.42
CTK3YML112W FPK1P53739 893 aa6.15□□□□□ -1.42
CTK3YML112W OPT2Q06593 877 aa6.14□□□□□ -1.43
CTK3YML112W YMR196WQ04336 1088 aa6.13□□□□□ -1.43
CTK3YML112W AGE1Q04412 482 aa6.13□□□□□ -1.43
CTK3YML112W HPF1Q05164 967 aa6.13□□□□□ -1.43
CTK3YML112W AIM7Q12156 149 aa6.13□□□□□ -1.43
CTK3YML112W YIR007WP40566 764 aa6.11□□□□□ -1.43
CTK3YML112W TUB4P53378 473 aa6.11□□□□□ -1.43
CTK3YML112W SLY41P22215 453 aa6.1□□□□□ -1.43
CTK3YML112W SCJ1P25303 377 aa6.1□□□□□ -1.43
CTK3YML112W HST2P53686 357 aa6.09□□□□□ -1.43
CTK3YML112W RPN1P38764 993 aaKnown RBP6.08□□□□□ -1.44
CTK3YML112W MMP1Q12372 583 aa6.08□□□□□ -1.44
CTK3YML112W GLN1P32288 370 aaKnown RBP6.07□□□□□ -1.44
CTK3YML112W MSB3P48566 633 aaPredicted RBP6.07□□□□□ -1.44
CTK3YML112W TYW1Q08960 810 aaKnown RBP6.06□□□□□ -1.44
CTK3YML112W KIN1P13185 1064 aa6.05□□□□□ -1.44
CTK3YML112W LSB3P43603 459 aaKnown RBP6.05□□□□□ -1.44
CTK3YML112W PTK2P47116 818 aaKnown RBP6.05□□□□□ -1.44
CTK3YML112W PUS6P53294 404 aa6.04□□□□□ -1.44
CTK3YML112W ESS1P22696 170 aa6.03□□□□□ -1.44
CTK3YML112W CSN12P47130 423 aa6.03□□□□□ -1.44
CTK3YML112W KTR1P27810 393 aaKnown RBP6.02□□□□□ -1.45
CTK3YML112W KXD1P53158 218 aa6.02□□□□□ -1.45
CTK3YML112W BUB1P41695 1021 aaKnown RBP RIP-Chip data6.01□□□□□ -1.45not detected
CTK3YML112W TRM1P15565 570 aaKnown RBP6□□□□□ -1.45
CTK3YML112W UGA3P26370 528 aa6□□□□□ -1.45
CTK3YML112W YJU3P28321 313 aa6□□□□□ -1.45
CTK3YML112W GLY1P37303 387 aaKnown RBP6□□□□□ -1.45
CTK3YML112W TBF1Q02457 562 aa6□□□□□ -1.45
CTK3YML112W HXT10P43581 546 aa5.99□□□□□ -1.45
CTK3YML112W PKH3Q03306 898 aaPredicted RBP5.98□□□□□ -1.45
CTK3YML112W TY1A-BLQ12266 440 aa5.98□□□□□ -1.45
CTK3YML112W YDL206WQ12424 762 aa5.98□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 11.3 ms