RNA–Protein interactions for RNA: YLR421C

RPN13, Transcript of Subunit of the 19S regulatory particle of the 26S proteasome lid, yeastyeast

Gene RPN13, Length 471 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN13YLR421C TY1A-JR2P47099 440 aa7.9□□□□□ -1.14
RPN13YLR421C TY1A-DR1Q03856 440 aa7.9□□□□□ -1.14
RPN13YLR421C TY1A-ML1Q04706 440 aaKnown RBP7.9□□□□□ -1.14
RPN13YLR421C TY1A-BRQ12217 440 aa7.9□□□□□ -1.14
RPN13YLR421C TY1A-NL2Q12470 440 aa7.9□□□□□ -1.14
RPN13YLR421C TY1A-GR2Q12485 440 aa7.9□□□□□ -1.14
RPN13YLR421C SEC2P17065 759 aa7.89□□□□□ -1.15
RPN13YLR421C MAM3Q12296 706 aa7.89□□□□□ -1.15
RPN13YLR421C ERG12P07277 443 aa7.86□□□□□ -1.15
RPN13YLR421C PSE1P32337 1089 aaKnown RBP7.86□□□□□ -1.15
RPN13YLR421C IES2P40154 320 aa7.86□□□□□ -1.15
RPN13YLR421C SPT16P32558 1035 aaKnown RBP7.84□□□□□ -1.15
RPN13YLR421C DSF2P38213 736 aa7.84□□□□□ -1.15
RPN13YLR421C TRK1P12685 1235 aa7.83□□□□□ -1.16
RPN13YLR421C KEX2P13134 814 aa7.83□□□□□ -1.16
RPN13YLR421C ERF2Q06551 359 aa7.83□□□□□ -1.16
RPN13YLR421C CST6P40535 587 aa7.82□□□□□ -1.16
RPN13YLR421C RRN7P40992 514 aa7.82□□□□□ -1.16
RPN13YLR421C SPB4P25808 606 aaPredicted RBP7.81□□□□□ -1.16
RPN13YLR421C NUP42P49686 430 aaKnown RBP7.78□□□□□ -1.16
RPN13YLR421C FRK1Q03002 865 aaPredicted RBP7.77□□□□□ -1.17
RPN13YLR421C PAT1P25644 796 aaKnown RBP7.76□□□□□ -1.17
RPN13YLR421C CLB5P30283 435 aa7.76□□□□□ -1.17
RPN13YLR421C CLA4P48562 842 aa7.76□□□□□ -1.17
RPN13YLR421C LAM6Q08001 693 aa7.75□□□□□ -1.17
RPN13YLR421C DIT2P21595 489 aa7.74□□□□□ -1.17
RPN13YLR421C AIR1P40507 360 aaKnown RBP7.74□□□□□ -1.17
RPN13YLR421C BDP1P46678 594 aa7.72□□□□□ -1.17
RPN13YLR421C TEA1P47988 759 aa7.72□□□□□ -1.17
RPN13YLR421C PAC1P39946 494 aaKnown RBP7.71□□□□□ -1.18
RPN13YLR421C TUB4P53378 473 aa7.69□□□□□ -1.18
RPN13YLR421C NIS1P53939 407 aa7.68□□□□□ -1.18
RPN13YLR421C AGE1Q04412 482 aa7.68□□□□□ -1.18
RPN13YLR421C YNL115CP53925 644 aa7.67□□□□□ -1.18
RPN13YLR421C RTF1P53064 558 aa7.66□□□□□ -1.18
RPN13YLR421C SIT4P20604 311 aa7.65□□□□□ -1.18
RPN13YLR421C MOD5P07884 428 aa7.62□□□□□ -1.19
RPN13YLR421C BRE2P43132 505 aa7.62□□□□□ -1.19
RPN13YLR421C CDC4P07834 779 aa7.61□□□□□ -1.19
RPN13YLR421C FPK1P53739 893 aa7.61□□□□□ -1.19
RPN13YLR421C HED1Q03937 162 aa7.6□□□□□ -1.19
RPN13YLR421C YMR196WQ04336 1088 aa7.6□□□□□ -1.19
RPN13YLR421C PUS5Q06244 254 aa7.6□□□□□ -1.19
RPN13YLR421C SLY41P22215 453 aa7.59□□□□□ -1.19
RPN13YLR421C GCR2Q01722 534 aa7.58□□□□□ -1.2
RPN13YLR421C KXD1P53158 218 aa7.55□□□□□ -1.2
RPN13YLR421C ATF2P53296 535 aa7.55□□□□□ -1.2
RPN13YLR421C SCJ1P25303 377 aa7.54□□□□□ -1.2
RPN13YLR421C MET32Q12041 191 aa7.54□□□□□ -1.2
RPN13YLR421C GLC3P32775 704 aa7.52□□□□□ -1.21
RPN13YLR421C RGA1P39083 1007 aa7.52□□□□□ -1.21
RPN13YLR421C PDC1P06169 563 aaKnown RBP7.51□□□□□ -1.21
RPN13YLR421C HXT10P43581 546 aa7.51□□□□□ -1.21
RPN13YLR421C HST2P53686 357 aa7.5□□□□□ -1.21
RPN13YLR421C YNR021WP53723 404 aaKnown RBP7.5□□□□□ -1.21
RPN13YLR421C GAR1P28007 205 aaKnown RBP7.49□□□□□ -1.21
RPN13YLR421C ASH1P34233 588 aa7.49□□□□□ -1.21
RPN13YLR421C RRD1P40454 393 aaKnown RBP7.49□□□□□ -1.21
RPN13YLR421C PUS6P53294 404 aa7.49□□□□□ -1.21
RPN13YLR421C TBF1Q02457 562 aa7.49□□□□□ -1.21
RPN13YLR421C YDL206WQ12424 762 aa7.49□□□□□ -1.21
RPN13YLR421C TPD3P31383 635 aa7.48□□□□□ -1.21
RPN13YLR421C MMP1Q12372 583 aa7.48□□□□□ -1.21
RPN13YLR421C TRM1P15565 570 aaKnown RBP7.47□□□□□ -1.21
RPN13YLR421C HST3P53687 447 aa7.47□□□□□ -1.21
RPN13YLR421C AFT1P22149 690 aa7.46□□□□□ -1.22
RPN13YLR421C ESS1P22696 170 aa7.45□□□□□ -1.22
RPN13YLR421C GLN1P32288 370 aaKnown RBP7.45□□□□□ -1.22
RPN13YLR421C RPA14P50106 137 aa7.45□□□□□ -1.22
RPN13YLR421C ALR1Q08269 859 aa7.45□□□□□ -1.22
RPN13YLR421C RQC2Q12532 1038 aaKnown RBP7.45□□□□□ -1.22
RPN13YLR421C SYH1Q02875 849 aaKnown RBP7.44□□□□□ -1.22
RPN13YLR421C TYW1Q08960 810 aaKnown RBP7.44□□□□□ -1.22
RPN13YLR421C GBP2P25555 427 aaKnown RBP RIP-Chip data7.43□□□□□ -1.22not detected
RPN13YLR421C MET22P32179 357 aa7.43□□□□□ -1.22
RPN13YLR421C YJU3P28321 313 aa7.42□□□□□ -1.22
RPN13YLR421C YPR097WQ06839 1073 aa7.42□□□□□ -1.22
RPN13YLR421C KIP2P28743 706 aa7.41□□□□□ -1.22
RPN13YLR421C BUB1P41695 1021 aaKnown RBP RIP-Chip data7.41□□□□□ -1.22not detected
RPN13YLR421C YPL062WQ02781 134 aa7.4□□□□□ -1.22
RPN13YLR421C YJR115WP47152 169 aa7.39□□□□□ -1.23
RPN13YLR421C RGA2Q06407 1009 aa7.39□□□□□ -1.23
RPN13YLR421C ENV9Q08651 330 aa7.39□□□□□ -1.23
RPN13YLR421C YDR444WQ04093 687 aa7.38□□□□□ -1.23
RPN13YLR421C KTR1P27810 393 aaKnown RBP7.37□□□□□ -1.23
RPN13YLR421C IXR1P33417 597 aa7.37□□□□□ -1.23
RPN13YLR421C AIM7Q12156 149 aa7.37□□□□□ -1.23
RPN13YLR421C PKH3Q03306 898 aaPredicted RBP7.36□□□□□ -1.23
RPN13YLR421C UGA3P26370 528 aa7.33□□□□□ -1.24
RPN13YLR421C RSC30P38781 883 aa7.33□□□□□ -1.24
RPN13YLR421C MSB3P48566 633 aaPredicted RBP7.33□□□□□ -1.24
RPN13YLR421C CSN12P47130 423 aa7.32□□□□□ -1.24
RPN13YLR421C LCB5Q06147 687 aaKnown RBP7.32□□□□□ -1.24
RPN13YLR421C ARG8P18544 423 aa7.31□□□□□ -1.24
RPN13YLR421C VAC17P25591 423 aa7.29□□□□□ -1.24
RPN13YLR421C MRT4P33201 236 aaKnown RBP7.29□□□□□ -1.24
RPN13YLR421C PTK2P47116 818 aaKnown RBP7.28□□□□□ -1.24
RPN13YLR421C ITT1Q04638 464 aa7.27□□□□□ -1.25
RPN13YLR421C SRF1Q12516 437 aa7.27□□□□□ -1.25
RPN13YLR421C RAD59Q12223 238 aa7.25□□□□□ -1.25
Retrieved 100 of 5,963 RNA–protein pairs in 27.1 ms