RNA–Protein interactions for RNA: YLR421C

RPN13, Transcript of Subunit of the 19S regulatory particle of the 26S proteasome lid, yeastyeast

Gene RPN13, Length 471 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN13YLR421C MTC1P47018 478 aaKnown RBP15.16■□□□□ 0.02
RPN13YLR421C DRS1P32892 752 aaKnown RBP14.15□□□□□ -0.14
RPN13YLR421C FAP1P53971 965 aa13.73□□□□□ -0.21
RPN13YLR421C PRY3P47033 881 aa12.9□□□□□ -0.34
RPN13YLR421C PRI1P10363 409 aa12.79□□□□□ -0.36
RPN13YLR421C AAD16Q02895 342 aa12.72□□□□□ -0.37
RPN13YLR421C ISW2Q08773 1120 aa12.57□□□□□ -0.4
RPN13YLR421C RPG1P38249 964 aaKnown RBP12.47□□□□□ -0.41
RPN13YLR421C DIP2Q12220 943 aaPredicted RBP12.4□□□□□ -0.42
RPN13YLR421C YCK3P39962 524 aa12.15□□□□□ -0.46
RPN13YLR421C TSR3Q12094 313 aaKnown RBP12.13□□□□□ -0.47
RPN13YLR421C HAA1Q12753 694 aaKnown RBP12.04□□□□□ -0.48
RPN13YLR421C RSE1Q04693 1361 aaKnown RBP11.99□□□□□ -0.49
RPN13YLR421C AVT3P36062 692 aa11.92□□□□□ -0.5
RPN13YLR421C BFR2Q06631 534 aaKnown RBP11.75□□□□□ -0.53
RPN13YLR421C RPL17AP05740 184 aaKnown RBP11.65□□□□□ -0.54
RPN13YLR421C RPL17BP46990 184 aaKnown RBP11.65□□□□□ -0.54
RPN13YLR421C MRPL32P25348 183 aa11.63□□□□□ -0.55
RPN13YLR421C REB1P21538 810 aa11.59□□□□□ -0.55
RPN13YLR421C YGL015CP33199 130 aa11.14□□□□□ -0.63
RPN13YLR421C SPT21P35209 758 aa11.09□□□□□ -0.63
RPN13YLR421C CDC27P38042 758 aa11.06□□□□□ -0.64
RPN13YLR421C YKR023WP36119 530 aaKnown RBP11□□□□□ -0.65
RPN13YLR421C HOP09932 586 aa10.81□□□□□ -0.68
RPN13YLR421C DCD1P06773 312 aa10.78□□□□□ -0.68
RPN13YLR421C TFC8Q12308 588 aa10.77□□□□□ -0.69
RPN13YLR421C MAP2P38174 421 aaKnown RBP10.71□□□□□ -0.69
RPN13YLR421C RIM101P33400 625 aa10.7□□□□□ -0.7
RPN13YLR421C UBP10P53874 792 aaPredicted RBP10.69□□□□□ -0.7
RPN13YLR421C SCY1P53009 804 aa10.5□□□□□ -0.73
RPN13YLR421C BCH2P36122 765 aa10.43□□□□□ -0.74
RPN13YLR421C OXP1P28273 1286 aa10.36□□□□□ -0.75
RPN13YLR421C SLX5P32828 619 aaKnown RBP10.35□□□□□ -0.75
RPN13YLR421C TIF4632P39936 914 aaKnown RBP10.28□□□□□ -0.76
RPN13YLR421C TFA1P36100 482 aa10.24□□□□□ -0.77
RPN13YLR421C BUD31P25337 157 aaPredicted RBP10.22□□□□□ -0.77
RPN13YLR421C PTP3P40048 928 aa10.22□□□□□ -0.77
RPN13YLR421C YIL055CP40523 627 aaKnown RBP10.22□□□□□ -0.77
RPN13YLR421C TGL3P40308 642 aa10.21□□□□□ -0.77
RPN13YLR421C EPS1P40557 701 aa10.17□□□□□ -0.78
RPN13YLR421C BDF1P35817 686 aa10.12□□□□□ -0.79
RPN13YLR421C YAH1Q12184 172 aaKnown RBP10.1□□□□□ -0.79
RPN13YLR421C RSM7P47150 247 aa10.05□□□□□ -0.8
RPN13YLR421C AI2P03876 854 aa9.97□□□□□ -0.81
RPN13YLR421C BBC1P47068 1157 aa9.97□□□□□ -0.81
RPN13YLR421C UBP9P39967 754 aa9.92□□□□□ -0.82
RPN13YLR421C YLR271WQ06152 274 aa9.88□□□□□ -0.83
RPN13YLR421C YOR238WQ08634 303 aa9.77□□□□□ -0.85
RPN13YLR421C SIS1P25294 352 aaKnown RBP9.76□□□□□ -0.85
RPN13YLR421C MST1P07236 462 aa9.75□□□□□ -0.85
RPN13YLR421C SSP1P38871 571 aa9.75□□□□□ -0.85
RPN13YLR421C NSR1P27476 414 aaKnown RBP RIP-Chip data9.72□□□□□ -0.85not detected
RPN13YLR421C PSD2P53037 1138 aaKnown RBP9.72□□□□□ -0.85
RPN13YLR421C YAP5P40574 245 aa9.69□□□□□ -0.86
RPN13YLR421C ARP8Q12386 881 aaKnown RBP RIP-Chip data9.68□□□□□ -0.86not detected
RPN13YLR421C YBL029C-AQ3E756 94 aa9.67□□□□□ -0.86
RPN13YLR421C MRM1P25270 412 aa9.62□□□□□ -0.87
RPN13YLR421C VNX1P42839 908 aa9.55□□□□□ -0.88
RPN13YLR421C CST9Q06032 482 aa9.55□□□□□ -0.88
RPN13YLR421C WSC3Q12215 556 aa9.55□□□□□ -0.88
RPN13YLR421C PIB1Q06651 286 aa9.53□□□□□ -0.88
RPN13YLR421C GTT3P39996 337 aa9.51□□□□□ -0.89
RPN13YLR421C MGA2P40578 1113 aa9.5□□□□□ -0.89
RPN13YLR421C SPP1Q03012 353 aa9.47□□□□□ -0.89
RPN13YLR421C RTG3P38165 486 aa9.4□□□□□ -0.9
RPN13YLR421C VPS29P38759 282 aa9.39□□□□□ -0.91
RPN13YLR421C TIF11P38912 153 aaKnown RBP9.37□□□□□ -0.91
RPN13YLR421C YMR1P47147 688 aaKnown RBP RIP-Chip data9.36□□□□□ -0.91not detected
RPN13YLR421C DBP1P24784 617 aaKnown RBP9.35□□□□□ -0.91
RPN13YLR421C YFR006WP43590 535 aa9.35□□□□□ -0.91
RPN13YLR421C RCR1P38212 213 aa9.32□□□□□ -0.92
RPN13YLR421C STS1P38637 319 aa9.29□□□□□ -0.92
RPN13YLR421C ULI1P43604 169 aa9.28□□□□□ -0.92
RPN13YLR421C LDB19Q12502 818 aa9.25□□□□□ -0.93
RPN13YLR421C SET4P42948 560 aa9.24□□□□□ -0.93
RPN13YLR421C YOL036WQ08206 761 aa9.24□□□□□ -0.93
RPN13YLR421C FKH1P40466 484 aa9.23□□□□□ -0.93
RPN13YLR421C IOC2Q12072 812 aa9.23□□□□□ -0.93
RPN13YLR421C MSB4Q12317 492 aa9.23□□□□□ -0.93
RPN13YLR421C AIR2Q12476 344 aaKnown RBP9.23□□□□□ -0.93
RPN13YLR421C VMA1P17255 1071 aaKnown RBP9.22□□□□□ -0.93
RPN13YLR421C EAP1P36041 632 aaKnown RBP9.18□□□□□ -0.94
RPN13YLR421C YJL171CP46992 396 aa9.16□□□□□ -0.94
RPN13YLR421C TRP5P00931 707 aaKnown RBP9.15□□□□□ -0.94
RPN13YLR421C SAM3Q08986 587 aa9.14□□□□□ -0.95
RPN13YLR421C RTG1P32607 177 aa9.09□□□□□ -0.95
RPN13YLR421C GYP5Q12344 894 aa9.05□□□□□ -0.96
RPN13YLR421C BMT6Q12291 365 aa9.04□□□□□ -0.96
RPN13YLR421C RAM2P29703 316 aa9.03□□□□□ -0.96
RPN13YLR421C YNL035CP53962 389 aaKnown RBP9.03□□□□□ -0.96
RPN13YLR421C NCR1Q12200 1170 aa9.01□□□□□ -0.97
RPN13YLR421C DCW1P36091 449 aa9□□□□□ -0.97
RPN13YLR421C ABP1P15891 592 aaKnown RBP8.98□□□□□ -0.97
RPN13YLR421C SEC61P32915 480 aa8.98□□□□□ -0.97
RPN13YLR421C HTA1P04911 132 aaKnown RBP8.97□□□□□ -0.97
RPN13YLR421C HTA2P04912 132 aa8.97□□□□□ -0.97
RPN13YLR421C MAK11P20484 414 aaKnown RBP8.97□□□□□ -0.97
RPN13YLR421C MIF2P35201 549 aa8.97□□□□□ -0.97
RPN13YLR421C EDS1P38073 919 aa8.92□□□□□ -0.98
RPN13YLR421C DAN4P47179 1161 aa8.92□□□□□ -0.98
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms