RNA–Protein interactions for RNA: YLR262C

YPT6, Transcript of Rab family GTPase, yeastyeast

Gene YPT6, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT6YLR262C TY1A-DR5P0CX65 440 aa8.26□□□□□ -1.09
YPT6YLR262C TY1A-ER2P0CX66 440 aa8.26□□□□□ -1.09
YPT6YLR262C TY1A-GR3P0CX67 440 aa8.26□□□□□ -1.09
YPT6YLR262C TY1A-LR1P0CX68 440 aa8.26□□□□□ -1.09
YPT6YLR262C TY1A-MR2P0CX69 440 aa8.26□□□□□ -1.09
YPT6YLR262C TY1A-JR2P47099 440 aa8.26□□□□□ -1.09
YPT6YLR262C TY1A-DR1Q03856 440 aa8.26□□□□□ -1.09
YPT6YLR262C TY1A-ML1Q04706 440 aaKnown RBP8.26□□□□□ -1.09
YPT6YLR262C TY1A-BRQ12217 440 aa8.26□□□□□ -1.09
YPT6YLR262C TY1A-NL2Q12470 440 aa8.26□□□□□ -1.09
YPT6YLR262C TY1A-GR2Q12485 440 aa8.26□□□□□ -1.09
YPT6YLR262C TRK1P12685 1235 aa8.25□□□□□ -1.09
YPT6YLR262C SEC2P17065 759 aa8.25□□□□□ -1.09
YPT6YLR262C DSF2P38213 736 aa8.25□□□□□ -1.09
YPT6YLR262C IES2P40154 320 aa8.24□□□□□ -1.09
YPT6YLR262C PAT1P25644 796 aaKnown RBP8.23□□□□□ -1.09
YPT6YLR262C SPB4P25808 606 aaPredicted RBP8.23□□□□□ -1.09
YPT6YLR262C CLB5P30283 435 aa8.23□□□□□ -1.09
YPT6YLR262C RRN7P40992 514 aa8.21□□□□□ -1.1
YPT6YLR262C KEX2P13134 814 aa8.2□□□□□ -1.1
YPT6YLR262C CST6P40535 587 aa8.18□□□□□ -1.1
YPT6YLR262C ERF2Q06551 359 aa8.16□□□□□ -1.1
YPT6YLR262C NUP42P49686 430 aaKnown RBP8.15□□□□□ -1.1
YPT6YLR262C FRK1Q03002 865 aaPredicted RBP8.15□□□□□ -1.1
YPT6YLR262C TEA1P47988 759 aa8.14□□□□□ -1.11
YPT6YLR262C LAM6Q08001 693 aa8.14□□□□□ -1.11
YPT6YLR262C BDP1P46678 594 aa8.11□□□□□ -1.11
YPT6YLR262C DIT2P21595 489 aa8.1□□□□□ -1.11
YPT6YLR262C RTF1P53064 558 aa8.1□□□□□ -1.11
YPT6YLR262C AIR1P40507 360 aaKnown RBP8.09□□□□□ -1.11
YPT6YLR262C CLA4P48562 842 aa8.09□□□□□ -1.11
YPT6YLR262C PAC1P39946 494 aaKnown RBP8.08□□□□□ -1.12
YPT6YLR262C YNL115CP53925 644 aa8.08□□□□□ -1.12
YPT6YLR262C SIT4P20604 311 aa8.06□□□□□ -1.12
YPT6YLR262C TUB4P53378 473 aa8.06□□□□□ -1.12
YPT6YLR262C NIS1P53939 407 aa8.05□□□□□ -1.12
YPT6YLR262C AGE1Q04412 482 aa8.05□□□□□ -1.12
YPT6YLR262C GCR2Q01722 534 aa8.04□□□□□ -1.12
YPT6YLR262C CDC4P07834 779 aa8.03□□□□□ -1.12
YPT6YLR262C BRE2P43132 505 aa8.03□□□□□ -1.12
YPT6YLR262C HED1Q03937 162 aa8.03□□□□□ -1.12
YPT6YLR262C YMR196WQ04336 1088 aa8.02□□□□□ -1.13
YPT6YLR262C MOD5P07884 428 aa8□□□□□ -1.13
YPT6YLR262C SLY41P22215 453 aa7.98□□□□□ -1.13
YPT6YLR262C KXD1P53158 218 aa7.98□□□□□ -1.13
YPT6YLR262C FPK1P53739 893 aa7.98□□□□□ -1.13
YPT6YLR262C ATF2P53296 535 aa7.97□□□□□ -1.13
YPT6YLR262C PUS5Q06244 254 aa7.95□□□□□ -1.14
YPT6YLR262C RGA1P39083 1007 aa7.92□□□□□ -1.14
YPT6YLR262C YNR021WP53723 404 aaKnown RBP7.91□□□□□ -1.14
YPT6YLR262C TBF1Q02457 562 aa7.91□□□□□ -1.14
YPT6YLR262C HXT10P43581 546 aa7.9□□□□□ -1.14
YPT6YLR262C HST2P53686 357 aa7.9□□□□□ -1.14
YPT6YLR262C MET32Q12041 191 aa7.9□□□□□ -1.14
YPT6YLR262C TPD3P31383 635 aa7.89□□□□□ -1.15
YPT6YLR262C ASH1P34233 588 aa7.89□□□□□ -1.15
YPT6YLR262C PUS6P53294 404 aa7.89□□□□□ -1.15
YPT6YLR262C HST3P53687 447 aa7.89□□□□□ -1.15
YPT6YLR262C PDC1P06169 563 aaKnown RBP7.88□□□□□ -1.15
YPT6YLR262C SCJ1P25303 377 aa7.88□□□□□ -1.15
YPT6YLR262C GAR1P28007 205 aaKnown RBP7.88□□□□□ -1.15
YPT6YLR262C GLC3P32775 704 aa7.88□□□□□ -1.15
YPT6YLR262C RRD1P40454 393 aaKnown RBP7.88□□□□□ -1.15
YPT6YLR262C MMP1Q12372 583 aa7.88□□□□□ -1.15
YPT6YLR262C GBP2P25555 427 aaKnown RBP RIP-Chip data7.87□□□□□ -1.15not detected
YPT6YLR262C ALR1Q08269 859 aa7.87□□□□□ -1.15
YPT6YLR262C AFT1P22149 690 aa7.86□□□□□ -1.15
YPT6YLR262C GLN1P32288 370 aaKnown RBP7.86□□□□□ -1.15
YPT6YLR262C SYH1Q02875 849 aaKnown RBP7.86□□□□□ -1.15
YPT6YLR262C YDL206WQ12424 762 aa7.86□□□□□ -1.15
YPT6YLR262C RPA14P50106 137 aa7.85□□□□□ -1.15
YPT6YLR262C TRM1P15565 570 aaKnown RBP7.84□□□□□ -1.15
YPT6YLR262C BUB1P41695 1021 aaKnown RBP RIP-Chip data7.83□□□□□ -1.16not detected
YPT6YLR262C YPR097WQ06839 1073 aa7.83□□□□□ -1.16
YPT6YLR262C MET22P32179 357 aa7.82□□□□□ -1.16
YPT6YLR262C ESS1P22696 170 aa7.81□□□□□ -1.16
YPT6YLR262C KIP2P28743 706 aa7.8□□□□□ -1.16
YPT6YLR262C YPL062WQ02781 134 aa7.8□□□□□ -1.16
YPT6YLR262C ENV9Q08651 330 aa7.8□□□□□ -1.16
YPT6YLR262C AIM7Q12156 149 aa7.79□□□□□ -1.16
YPT6YLR262C YDR444WQ04093 687 aa7.78□□□□□ -1.16
YPT6YLR262C TYW1Q08960 810 aaKnown RBP7.78□□□□□ -1.16
YPT6YLR262C IXR1P33417 597 aa7.77□□□□□ -1.17
YPT6YLR262C YJR115WP47152 169 aa7.77□□□□□ -1.17
YPT6YLR262C YJU3P28321 313 aa7.75□□□□□ -1.17
YPT6YLR262C MSB3P48566 633 aaPredicted RBP7.75□□□□□ -1.17
YPT6YLR262C RGA2Q06407 1009 aa7.75□□□□□ -1.17
YPT6YLR262C UGA3P26370 528 aa7.74□□□□□ -1.17
YPT6YLR262C LEU3P08638 886 aa7.73□□□□□ -1.17
YPT6YLR262C PKH3Q03306 898 aaPredicted RBP7.73□□□□□ -1.17
YPT6YLR262C LCB5Q06147 687 aaKnown RBP7.72□□□□□ -1.17
YPT6YLR262C CSN12P47130 423 aa7.71□□□□□ -1.18
YPT6YLR262C KTR1P27810 393 aaKnown RBP7.7□□□□□ -1.18
YPT6YLR262C SRF1Q12516 437 aa7.7□□□□□ -1.18
YPT6YLR262C ARG8P18544 423 aa7.69□□□□□ -1.18
YPT6YLR262C RSC30P38781 883 aa7.69□□□□□ -1.18
YPT6YLR262C MRT4P33201 236 aaKnown RBP7.68□□□□□ -1.18
YPT6YLR262C VAC17P25591 423 aa7.66□□□□□ -1.18
YPT6YLR262C PTK2P47116 818 aaKnown RBP7.66□□□□□ -1.18
YPT6YLR262C RTT106P40161 455 aa7.65□□□□□ -1.18
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms