RNA–Protein interactions for RNA: YLR262C

YPT6, Transcript of Rab family GTPase, yeastyeast

Gene YPT6, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT6YLR262C MTC1P47018 478 aaKnown RBP15.87■□□□□ 0.13
YPT6YLR262C DRS1P32892 752 aaKnown RBP14.82□□□□□ -0.04
YPT6YLR262C FAP1P53971 965 aa14.38□□□□□ -0.11
YPT6YLR262C PRY3P47033 881 aa13.48□□□□□ -0.25
YPT6YLR262C PRI1P10363 409 aa13.38□□□□□ -0.27
YPT6YLR262C AAD16Q02895 342 aa13.33□□□□□ -0.28
YPT6YLR262C ISW2Q08773 1120 aa13.21□□□□□ -0.29
YPT6YLR262C RPG1P38249 964 aaKnown RBP13.03□□□□□ -0.32
YPT6YLR262C DIP2Q12220 943 aaPredicted RBP12.99□□□□□ -0.33
YPT6YLR262C TSR3Q12094 313 aaKnown RBP12.66□□□□□ -0.38
YPT6YLR262C HAA1Q12753 694 aaKnown RBP12.65□□□□□ -0.38
YPT6YLR262C YCK3P39962 524 aa12.62□□□□□ -0.39
YPT6YLR262C RSE1Q04693 1361 aaKnown RBP12.58□□□□□ -0.4
YPT6YLR262C AVT3P36062 692 aa12.46□□□□□ -0.41
YPT6YLR262C BFR2Q06631 534 aaKnown RBP12.31□□□□□ -0.44
YPT6YLR262C MRPL32P25348 183 aa12.21□□□□□ -0.45
YPT6YLR262C RPL17AP05740 184 aaKnown RBP12.18□□□□□ -0.46
YPT6YLR262C RPL17BP46990 184 aaKnown RBP12.18□□□□□ -0.46
YPT6YLR262C REB1P21538 810 aa12.16□□□□□ -0.46
YPT6YLR262C YGL015CP33199 130 aa11.71□□□□□ -0.53
YPT6YLR262C SPT21P35209 758 aa11.59□□□□□ -0.55
YPT6YLR262C CDC27P38042 758 aa11.52□□□□□ -0.57
YPT6YLR262C YKR023WP36119 530 aaKnown RBP11.48□□□□□ -0.57
YPT6YLR262C HOP09932 586 aa11.28□□□□□ -0.6
YPT6YLR262C TFC8Q12308 588 aa11.26□□□□□ -0.61
YPT6YLR262C UBP10P53874 792 aaPredicted RBP11.24□□□□□ -0.61
YPT6YLR262C DCD1P06773 312 aa11.21□□□□□ -0.61
YPT6YLR262C RIM101P33400 625 aa11.2□□□□□ -0.62
YPT6YLR262C MAP2P38174 421 aaKnown RBP11.19□□□□□ -0.62
YPT6YLR262C SCY1P53009 804 aa10.98□□□□□ -0.65
YPT6YLR262C BCH2P36122 765 aa10.9□□□□□ -0.66
YPT6YLR262C SLX5P32828 619 aaKnown RBP10.86□□□□□ -0.67
YPT6YLR262C TIF4632P39936 914 aaKnown RBP10.83□□□□□ -0.68
YPT6YLR262C OXP1P28273 1286 aa10.81□□□□□ -0.68
YPT6YLR262C TFA1P36100 482 aa10.76□□□□□ -0.69
YPT6YLR262C YIL055CP40523 627 aaKnown RBP10.74□□□□□ -0.69
YPT6YLR262C TGL3P40308 642 aa10.73□□□□□ -0.69
YPT6YLR262C PTP3P40048 928 aa10.72□□□□□ -0.69
YPT6YLR262C BUD31P25337 157 aaPredicted RBP10.7□□□□□ -0.7
YPT6YLR262C EPS1P40557 701 aa10.63□□□□□ -0.71
YPT6YLR262C BDF1P35817 686 aa10.58□□□□□ -0.72
YPT6YLR262C YAH1Q12184 172 aaKnown RBP10.55□□□□□ -0.72
YPT6YLR262C RSM7P47150 247 aa10.54□□□□□ -0.72
YPT6YLR262C BBC1P47068 1157 aa10.5□□□□□ -0.73
YPT6YLR262C UBP9P39967 754 aa10.46□□□□□ -0.73
YPT6YLR262C AI2P03876 854 aa10.44□□□□□ -0.74
YPT6YLR262C YLR271WQ06152 274 aa10.32□□□□□ -0.76
YPT6YLR262C YOR238WQ08634 303 aa10.27□□□□□ -0.77
YPT6YLR262C MST1P07236 462 aa10.24□□□□□ -0.77
YPT6YLR262C SIS1P25294 352 aaKnown RBP10.24□□□□□ -0.77
YPT6YLR262C NSR1P27476 414 aaKnown RBP RIP-Chip data10.24□□□□□ -0.77not detected
YPT6YLR262C SSP1P38871 571 aa10.22□□□□□ -0.77
YPT6YLR262C YAP5P40574 245 aa10.2□□□□□ -0.78
YPT6YLR262C ARP8Q12386 881 aaKnown RBP RIP-Chip data10.2□□□□□ -0.78not detected
YPT6YLR262C PSD2P53037 1138 aaKnown RBP10.17□□□□□ -0.78
YPT6YLR262C YBL029C-AQ3E756 94 aa10.11□□□□□ -0.79
YPT6YLR262C MRM1P25270 412 aa10.07□□□□□ -0.8
YPT6YLR262C GTT3P39996 337 aa10.01□□□□□ -0.81
YPT6YLR262C VNX1P42839 908 aa10.01□□□□□ -0.81
YPT6YLR262C MGA2P40578 1113 aa9.98□□□□□ -0.81
YPT6YLR262C WSC3Q12215 556 aa9.98□□□□□ -0.81
YPT6YLR262C CST9Q06032 482 aa9.96□□□□□ -0.82
YPT6YLR262C SPP1Q03012 353 aa9.95□□□□□ -0.82
YPT6YLR262C PIB1Q06651 286 aa9.93□□□□□ -0.82
YPT6YLR262C RTG3P38165 486 aa9.87□□□□□ -0.83
YPT6YLR262C TIF11P38912 153 aaKnown RBP9.85□□□□□ -0.83
YPT6YLR262C YMR1P47147 688 aaKnown RBP RIP-Chip data9.83□□□□□ -0.84not detected
YPT6YLR262C VPS29P38759 282 aa9.81□□□□□ -0.84
YPT6YLR262C DBP1P24784 617 aaKnown RBP9.79□□□□□ -0.84
YPT6YLR262C YFR006WP43590 535 aa9.75□□□□□ -0.85
YPT6YLR262C ULI1P43604 169 aa9.74□□□□□ -0.85
YPT6YLR262C MSB4Q12317 492 aa9.73□□□□□ -0.85
YPT6YLR262C RCR1P38212 213 aa9.71□□□□□ -0.86
YPT6YLR262C STS1P38637 319 aa9.71□□□□□ -0.86
YPT6YLR262C EAP1P36041 632 aaKnown RBP9.69□□□□□ -0.86
YPT6YLR262C LDB19Q12502 818 aa9.69□□□□□ -0.86
YPT6YLR262C FKH1P40466 484 aa9.68□□□□□ -0.86
YPT6YLR262C YOL036WQ08206 761 aa9.68□□□□□ -0.86
YPT6YLR262C VMA1P17255 1071 aaKnown RBP9.67□□□□□ -0.86
YPT6YLR262C SET4P42948 560 aa9.67□□□□□ -0.86
YPT6YLR262C IOC2Q12072 812 aa9.67□□□□□ -0.86
YPT6YLR262C AIR2Q12476 344 aaKnown RBP9.67□□□□□ -0.86
YPT6YLR262C YJL171CP46992 396 aa9.66□□□□□ -0.86
YPT6YLR262C SAM3Q08986 587 aa9.61□□□□□ -0.87
YPT6YLR262C TRP5P00931 707 aaKnown RBP9.58□□□□□ -0.88
YPT6YLR262C RTG1P32607 177 aa9.53□□□□□ -0.88
YPT6YLR262C BMT6Q12291 365 aa9.51□□□□□ -0.89
YPT6YLR262C GYP5Q12344 894 aa9.51□□□□□ -0.89
YPT6YLR262C YNL035CP53962 389 aaKnown RBP9.5□□□□□ -0.89
YPT6YLR262C ABP1P15891 592 aaKnown RBP9.49□□□□□ -0.89
YPT6YLR262C NCR1Q12200 1170 aa9.49□□□□□ -0.89
YPT6YLR262C SEC61P32915 480 aa9.46□□□□□ -0.9
YPT6YLR262C HTA1P04911 132 aaKnown RBP9.43□□□□□ -0.9
YPT6YLR262C HTA2P04912 132 aa9.43□□□□□ -0.9
YPT6YLR262C MAK11P20484 414 aaKnown RBP9.43□□□□□ -0.9
YPT6YLR262C RAM2P29703 316 aa9.43□□□□□ -0.9
YPT6YLR262C DCW1P36091 449 aa9.42□□□□□ -0.9
YPT6YLR262C TFG1P41895 735 aaPredicted RBP9.42□□□□□ -0.9
YPT6YLR262C MIF2P35201 549 aa9.41□□□□□ -0.9
YPT6YLR262C JIP4Q03361 876 aa9.41□□□□□ -0.9
Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms