RNA–Protein interactions for RNA: YLR193C

UPS1, Transcript of Phosphatidic acid transfer protein, yeastyeast

Gene UPS1, Length 528 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UPS1YLR193C PBS2P08018 668 aa4.38□□□□□ -1.71
UPS1YLR193C DMA1P38823 416 aa4.38□□□□□ -1.71
UPS1YLR193C MVP1P40959 511 aaKnown RBP4.38□□□□□ -1.71
UPS1YLR193C CLB5P30283 435 aa4.37□□□□□ -1.71
UPS1YLR193C RQC2Q12532 1038 aaKnown RBP4.37□□□□□ -1.71
UPS1YLR193C PSE1P32337 1089 aaKnown RBP4.36□□□□□ -1.71
UPS1YLR193C LCB5Q06147 687 aaKnown RBP4.36□□□□□ -1.71
UPS1YLR193C RGR1P19263 1082 aa4.35□□□□□ -1.71
UPS1YLR193C GCD11P32481 527 aaKnown RBP4.35□□□□□ -1.71
UPS1YLR193C SPT16P32558 1035 aaKnown RBP4.35□□□□□ -1.71
UPS1YLR193C STR2P47164 639 aa4.35□□□□□ -1.71
UPS1YLR193C ISM1P48526 1002 aa4.35□□□□□ -1.71
UPS1YLR193C MAM3Q12296 706 aa4.35□□□□□ -1.71
UPS1YLR193C YPR109WQ06104 294 aa4.34□□□□□ -1.71
UPS1YLR193C SAS10Q12136 610 aaPredicted RBP4.34□□□□□ -1.71
UPS1YLR193C DSF2P38213 736 aa4.32□□□□□ -1.72
UPS1YLR193C FRK1Q03002 865 aaPredicted RBP4.31□□□□□ -1.72
UPS1YLR193C HED1Q03937 162 aa4.31□□□□□ -1.72
UPS1YLR193C SPB4P25808 606 aaPredicted RBP4.29□□□□□ -1.72
UPS1YLR193C RTF1P53064 558 aa4.29□□□□□ -1.72
UPS1YLR193C RRN7P40992 514 aa4.28□□□□□ -1.72
UPS1YLR193C BDP1P46678 594 aa4.28□□□□□ -1.72
UPS1YLR193C TY1A-DR4O74302 440 aa4.27□□□□□ -1.73
UPS1YLR193C TY1A-HP0C2I4 478 aaKnown RBP4.27□□□□□ -1.73
UPS1YLR193C TY1A-AP0CX57 440 aa4.27□□□□□ -1.73
UPS1YLR193C TY1A-PR1P0CX58 440 aa4.27□□□□□ -1.73
UPS1YLR193C TY1A-ORP0CX59 440 aa4.27□□□□□ -1.73
UPS1YLR193C TY1A-PR2P0CX60 440 aa4.27□□□□□ -1.73
UPS1YLR193C TY1A-DR5P0CX65 440 aa4.27□□□□□ -1.73
UPS1YLR193C TY1A-ER2P0CX66 440 aa4.27□□□□□ -1.73
UPS1YLR193C TY1A-GR3P0CX67 440 aa4.27□□□□□ -1.73
UPS1YLR193C TY1A-LR1P0CX68 440 aa4.27□□□□□ -1.73
UPS1YLR193C TY1A-MR2P0CX69 440 aa4.27□□□□□ -1.73
UPS1YLR193C SEC2P17065 759 aa4.27□□□□□ -1.73
UPS1YLR193C TY1A-JR2P47099 440 aa4.27□□□□□ -1.73
UPS1YLR193C TY1A-DR1Q03856 440 aa4.27□□□□□ -1.73
UPS1YLR193C TY1A-ML1Q04706 440 aaKnown RBP4.27□□□□□ -1.73
UPS1YLR193C TY1A-BRQ12217 440 aa4.27□□□□□ -1.73
UPS1YLR193C TY1A-NL2Q12470 440 aa4.27□□□□□ -1.73
UPS1YLR193C TY1A-GR2Q12485 440 aa4.27□□□□□ -1.73
UPS1YLR193C IES2P40154 320 aa4.26□□□□□ -1.73
UPS1YLR193C TEA1P47988 759 aa4.26□□□□□ -1.73
UPS1YLR193C RRD1P40454 393 aaKnown RBP4.25□□□□□ -1.73
UPS1YLR193C YNL115CP53925 644 aa4.25□□□□□ -1.73
UPS1YLR193C KEX2P13134 814 aa4.24□□□□□ -1.73
UPS1YLR193C ASH1P34233 588 aa4.24□□□□□ -1.73
UPS1YLR193C AFT1P22149 690 aa4.23□□□□□ -1.73
UPS1YLR193C NUP42P49686 430 aaKnown RBP4.23□□□□□ -1.73
UPS1YLR193C SIT4P20604 311 aa4.22□□□□□ -1.73
UPS1YLR193C TRK2P28584 889 aa4.21□□□□□ -1.74
UPS1YLR193C HST3P53687 447 aa4.21□□□□□ -1.74
UPS1YLR193C YMR196WQ04336 1088 aa4.21□□□□□ -1.74
UPS1YLR193C MET32Q12041 191 aa4.21□□□□□ -1.74
UPS1YLR193C KXD1P53158 218 aa4.2□□□□□ -1.74
UPS1YLR193C TUB4P53378 473 aa4.2□□□□□ -1.74
UPS1YLR193C MOD5P07884 428 aa4.19□□□□□ -1.74
UPS1YLR193C ACO2P39533 789 aa4.19□□□□□ -1.74
UPS1YLR193C PAC1P39946 494 aaKnown RBP4.19□□□□□ -1.74
UPS1YLR193C ERF2Q06551 359 aa4.19□□□□□ -1.74
UPS1YLR193C TPD3P31383 635 aa4.18□□□□□ -1.74
UPS1YLR193C CAF120P53836 1060 aa4.18□□□□□ -1.74
UPS1YLR193C NIS1P53939 407 aa4.18□□□□□ -1.74
UPS1YLR193C AGE1Q04412 482 aa4.18□□□□□ -1.74
UPS1YLR193C DIT2P21595 489 aa4.17□□□□□ -1.74
UPS1YLR193C ATF2P53296 535 aa4.17□□□□□ -1.74
UPS1YLR193C TBF1Q02457 562 aa4.17□□□□□ -1.74
UPS1YLR193C SLY41P22215 453 aa4.16□□□□□ -1.74
UPS1YLR193C YJR115WP47152 169 aa4.16□□□□□ -1.74
UPS1YLR193C YGR035CP53222 116 aa4.16□□□□□ -1.74
UPS1YLR193C ALR1Q08269 859 aa4.16□□□□□ -1.74
UPS1YLR193C RTT106P40161 455 aa4.15□□□□□ -1.75
UPS1YLR193C HXT10P43581 546 aa4.15□□□□□ -1.75
UPS1YLR193C PUS6P53294 404 aa4.15□□□□□ -1.75
UPS1YLR193C YNR021WP53723 404 aaKnown RBP4.15□□□□□ -1.75
UPS1YLR193C FPK1P53739 893 aa4.15□□□□□ -1.75
UPS1YLR193C SYH1Q02875 849 aaKnown RBP4.15□□□□□ -1.75
UPS1YLR193C BUB1P41695 1021 aaKnown RBP RIP-Chip data4.14□□□□□ -1.75not detected
UPS1YLR193C RPA14P50106 137 aa4.14□□□□□ -1.75
UPS1YLR193C HST2P53686 357 aa4.14□□□□□ -1.75
UPS1YLR193C GLN1P32288 370 aaKnown RBP4.12□□□□□ -1.75
UPS1YLR193C PDC1P06169 563 aaKnown RBP4.11□□□□□ -1.75
UPS1YLR193C KIP2P28743 706 aa4.11□□□□□ -1.75
UPS1YLR193C MSB3P48566 633 aaPredicted RBP4.11□□□□□ -1.75
UPS1YLR193C PUS5Q06244 254 aa4.11□□□□□ -1.75
UPS1YLR193C YPR097WQ06839 1073 aa4.11□□□□□ -1.75
UPS1YLR193C MMP1Q12372 583 aa4.11□□□□□ -1.75
UPS1YLR193C ICP55P40051 511 aa4.1□□□□□ -1.75
UPS1YLR193C LSB3P43603 459 aaKnown RBP4.1□□□□□ -1.75
UPS1YLR193C AIM7Q12156 149 aa4.1□□□□□ -1.75
UPS1YLR193C YDL206WQ12424 762 aa4.1□□□□□ -1.75
UPS1YLR193C UGA3P26370 528 aa4.09□□□□□ -1.75
UPS1YLR193C HPF1Q05164 967 aa4.09□□□□□ -1.75
UPS1YLR193C PUS1Q12211 544 aaKnown RBP4.09□□□□□ -1.75
UPS1YLR193C TRM1P15565 570 aaKnown RBP4.08□□□□□ -1.76
UPS1YLR193C IXR1P33417 597 aa4.08□□□□□ -1.76
UPS1YLR193C YLR346CQ06139 101 aa4.08□□□□□ -1.76
UPS1YLR193C OPT2Q06593 877 aa4.08□□□□□ -1.76
UPS1YLR193C YPR204WQ08995 1032 aa4.08□□□□□ -1.76
UPS1YLR193C SRF1Q12516 437 aa4.08□□□□□ -1.76
UPS1YLR193C NRD1P53617 575 aaKnown RBP RIP-Chip data4.07□□□□□ -1.76not detected
Retrieved 100 of 5,963 RNA–protein pairs in 35.8 ms