RNA–Protein interactions for RNA: YLR193C

UPS1, Transcript of Phosphatidic acid transfer protein, yeastyeast

Gene UPS1, Length 528 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UPS1YLR193C FAP1P53971 965 aa9.28□□□□□ -0.92
UPS1YLR193C MTC1P47018 478 aaKnown RBP8.97□□□□□ -0.97
UPS1YLR193C PRY3P47033 881 aa8.77□□□□□ -1.01
UPS1YLR193C AAD16Q02895 342 aa8.28□□□□□ -1.08
UPS1YLR193C YCK3P39962 524 aa8.24□□□□□ -1.09
UPS1YLR193C HAA1Q12753 694 aaKnown RBP8.22□□□□□ -1.09
UPS1YLR193C PRI1P10363 409 aa8.18□□□□□ -1.1
UPS1YLR193C ISW2Q08773 1120 aa7.69□□□□□ -1.18
UPS1YLR193C DRS1P32892 752 aaKnown RBP7.67□□□□□ -1.18
UPS1YLR193C TSR3Q12094 313 aaKnown RBP7.64□□□□□ -1.19
UPS1YLR193C RPG1P38249 964 aaKnown RBP7.61□□□□□ -1.19
UPS1YLR193C YGL015CP33199 130 aa7.4□□□□□ -1.22
UPS1YLR193C MRPL32P25348 183 aa7.38□□□□□ -1.23
UPS1YLR193C BUD31P25337 157 aaPredicted RBP7.27□□□□□ -1.25
UPS1YLR193C RSE1Q04693 1361 aaKnown RBP6.87□□□□□ -1.31
UPS1YLR193C UBP10P53874 792 aaPredicted RBP6.81□□□□□ -1.32
UPS1YLR193C SIS1P25294 352 aaKnown RBP6.79□□□□□ -1.32
UPS1YLR193C CDC27P38042 758 aa6.79□□□□□ -1.32
UPS1YLR193C REB1P21538 810 aa6.78□□□□□ -1.32
UPS1YLR193C DIP2Q12220 943 aaPredicted RBP6.77□□□□□ -1.33
UPS1YLR193C MAP2P38174 421 aaKnown RBP6.71□□□□□ -1.34
UPS1YLR193C RPL17AP05740 184 aaKnown RBP6.69□□□□□ -1.34
UPS1YLR193C RPL17BP46990 184 aaKnown RBP6.69□□□□□ -1.34
UPS1YLR193C UBP9P39967 754 aa6.66□□□□□ -1.34
UPS1YLR193C TIF4632P39936 914 aaKnown RBP6.53□□□□□ -1.36
UPS1YLR193C YKR023WP36119 530 aaKnown RBP6.52□□□□□ -1.37
UPS1YLR193C TGL3P40308 642 aa6.52□□□□□ -1.37
UPS1YLR193C AVT3P36062 692 aa6.46□□□□□ -1.38
UPS1YLR193C TFC8Q12308 588 aa6.39□□□□□ -1.39
UPS1YLR193C SLX5P32828 619 aaKnown RBP6.38□□□□□ -1.39
UPS1YLR193C SCY1P53009 804 aa6.38□□□□□ -1.39
UPS1YLR193C BFR2Q06631 534 aaKnown RBP6.38□□□□□ -1.39
UPS1YLR193C HOP09932 586 aa6.36□□□□□ -1.39
UPS1YLR193C SPT21P35209 758 aa6.36□□□□□ -1.39
UPS1YLR193C DCD1P06773 312 aa6.34□□□□□ -1.39
UPS1YLR193C YBL029C-AQ3E756 94 aa6.15□□□□□ -1.42
UPS1YLR193C MST1P07236 462 aa6.13□□□□□ -1.43
UPS1YLR193C BCH2P36122 765 aa6.13□□□□□ -1.43
UPS1YLR193C VNX1P42839 908 aa6.05□□□□□ -1.44
UPS1YLR193C YOR238WQ08634 303 aa6.03□□□□□ -1.44
UPS1YLR193C YJL171CP46992 396 aa6.01□□□□□ -1.45
UPS1YLR193C AIR2Q12476 344 aaKnown RBP6.01□□□□□ -1.45
UPS1YLR193C SPP1Q03012 353 aa6□□□□□ -1.45
UPS1YLR193C FKH1P40466 484 aa5.96□□□□□ -1.46
UPS1YLR193C NSR1P27476 414 aaKnown RBP RIP-Chip data5.94□□□□□ -1.46 RIP-Chip
UPS1YLR193C BDF1P35817 686 aa5.91□□□□□ -1.46
UPS1YLR193C EPS1P40557 701 aa5.9□□□□□ -1.46
UPS1YLR193C RIM101P33400 625 aa5.89□□□□□ -1.47
UPS1YLR193C TIF11P38912 153 aaKnown RBP5.87□□□□□ -1.47
UPS1YLR193C WSC3Q12215 556 aa5.87□□□□□ -1.47
UPS1YLR193C YAP5P40574 245 aa5.84□□□□□ -1.47
UPS1YLR193C BMT6Q12291 365 aa5.84□□□□□ -1.47
UPS1YLR193C LDB19Q12502 818 aa5.78□□□□□ -1.48
UPS1YLR193C GTT3P39996 337 aa5.73□□□□□ -1.49
UPS1YLR193C IOC2Q12072 812 aa5.72□□□□□ -1.49
UPS1YLR193C ULI1P43604 169 aa5.71□□□□□ -1.5
UPS1YLR193C TFA1P36100 482 aa5.7□□□□□ -1.5
UPS1YLR193C OXP1P28273 1286 aa5.63□□□□□ -1.51
UPS1YLR193C BBC1P47068 1157 aa5.63□□□□□ -1.51
UPS1YLR193C YIL055CP40523 627 aaKnown RBP5.61□□□□□ -1.51
UPS1YLR193C PTP3P40048 928 aa5.6□□□□□ -1.51
UPS1YLR193C EAP1P36041 632 aaKnown RBP5.59□□□□□ -1.51
UPS1YLR193C MSB4Q12317 492 aa5.59□□□□□ -1.51
UPS1YLR193C RTG1P32607 177 aa5.57□□□□□ -1.52
UPS1YLR193C NCR1Q12200 1170 aa5.57□□□□□ -1.52
UPS1YLR193C RGA2Q06407 1009 aa5.56□□□□□ -1.52
UPS1YLR193C BCK2P33306 851 aa5.55□□□□□ -1.52
UPS1YLR193C AI2P03876 854 aa5.53□□□□□ -1.52
UPS1YLR193C SEC61P32915 480 aa5.52□□□□□ -1.53
UPS1YLR193C TRP5P00931 707 aaKnown RBP5.49□□□□□ -1.53
UPS1YLR193C RSM7P47150 247 aa5.49□□□□□ -1.53
UPS1YLR193C YNL035CP53962 389 aaKnown RBP5.49□□□□□ -1.53
UPS1YLR193C PIB1Q06651 286 aa5.48□□□□□ -1.53
UPS1YLR193C YOL036WQ08206 761 aa5.45□□□□□ -1.54
UPS1YLR193C CHL1P22516 861 aaPredicted RBP5.44□□□□□ -1.54
UPS1YLR193C SET4P42948 560 aa5.44□□□□□ -1.54
UPS1YLR193C TFG1P41895 735 aaPredicted RBP5.43□□□□□ -1.54
UPS1YLR193C YAH1Q12184 172 aaKnown RBP5.42□□□□□ -1.54
UPS1YLR193C SAP30P38429 201 aa5.4□□□□□ -1.54
UPS1YLR193C PRE3P38624 215 aa5.37□□□□□ -1.55
UPS1YLR193C ARP8Q12386 881 aaKnown RBP RIP-Chip data5.36□□□□□ -1.55not detected
UPS1YLR193C XDJ1P39102 459 aa5.35□□□□□ -1.55
UPS1YLR193C RGA1P39083 1007 aa5.34□□□□□ -1.55
UPS1YLR193C YDL129WQ07555 291 aa5.34□□□□□ -1.55
UPS1YLR193C DAN4P47179 1161 aa5.33□□□□□ -1.56
UPS1YLR193C YLR271WQ06152 274 aa5.33□□□□□ -1.56
UPS1YLR193C JIP4Q03361 876 aa5.32□□□□□ -1.56
UPS1YLR193C SSP1P38871 571 aa5.31□□□□□ -1.56
UPS1YLR193C SAM3Q08986 587 aa5.3□□□□□ -1.56
UPS1YLR193C DPS1P04802 557 aaKnown RBP5.28□□□□□ -1.56
UPS1YLR193C VRP1P37370 817 aa5.28□□□□□ -1.56
UPS1YLR193C PSD2P53037 1138 aaKnown RBP5.28□□□□□ -1.56
UPS1YLR193C VMA1P17255 1071 aaKnown RBP5.27□□□□□ -1.57
UPS1YLR193C MRM1P25270 412 aa5.25□□□□□ -1.57
UPS1YLR193C YMR1P47147 688 aaKnown RBP RIP-Chip data5.25□□□□□ -1.57not detected
UPS1YLR193C ABP1P15891 592 aaKnown RBP5.24□□□□□ -1.57
UPS1YLR193C DBP1P24784 617 aaKnown RBP5.23□□□□□ -1.57
UPS1YLR193C MGA2P40578 1113 aa5.22□□□□□ -1.57
UPS1YLR193C PTC4P38089 393 aa5.19□□□□□ -1.58
UPS1YLR193C SRC1Q03707 834 aa5.18□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms