RNA–Protein interactions for RNA: YDR499W

LCD1, Transcript of Essential protein required for the DNA integrity checkpoint pathways, yeastyeast

Gene LCD1, Length 2,244 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCD1YDR499W TY1A-DR1Q03856 440 aa4.41□□□□□ -1.7
LCD1YDR499W TY1A-ML1Q04706 440 aaKnown RBP4.41□□□□□ -1.7
LCD1YDR499W TY1A-BRQ12217 440 aa4.41□□□□□ -1.7
LCD1YDR499W TY1A-NL2Q12470 440 aa4.41□□□□□ -1.7
LCD1YDR499W TY1A-GR2Q12485 440 aa4.41□□□□□ -1.7
LCD1YDR499W MAM3Q12296 706 aa4.41□□□□□ -1.7
LCD1YDR499W SEC2P17065 759 aa4.4□□□□□ -1.7
LCD1YDR499W SAS10Q12136 610 aaPredicted RBP4.4□□□□□ -1.7
LCD1YDR499W ERG12P07277 443 aa4.4□□□□□ -1.71
LCD1YDR499W IES2P40154 320 aa4.39□□□□□ -1.71
LCD1YDR499W KEX2P13134 814 aa4.38□□□□□ -1.71
LCD1YDR499W SPT16P32558 1035 aaKnown RBP4.38□□□□□ -1.71
LCD1YDR499W RRN7P40992 514 aa4.38□□□□□ -1.71
LCD1YDR499W ERF2Q06551 359 aa4.38□□□□□ -1.71
LCD1YDR499W TRK1P12685 1235 aa4.37□□□□□ -1.71
LCD1YDR499W SPB4P25808 606 aaPredicted RBP4.37□□□□□ -1.71
LCD1YDR499W PSE1P32337 1089 aaKnown RBP4.37□□□□□ -1.71
LCD1YDR499W CST6P40535 587 aa4.37□□□□□ -1.71
LCD1YDR499W DSF2P38213 736 aa4.37□□□□□ -1.71
LCD1YDR499W FRK1Q03002 865 aaPredicted RBP4.36□□□□□ -1.71
LCD1YDR499W CLA4P48562 842 aa4.34□□□□□ -1.72
LCD1YDR499W PAT1P25644 796 aaKnown RBP4.33□□□□□ -1.72
LCD1YDR499W AIR1P40507 360 aaKnown RBP4.33□□□□□ -1.72
LCD1YDR499W NUP42P49686 430 aaKnown RBP4.33□□□□□ -1.72
LCD1YDR499W DIT2P21595 489 aa4.33□□□□□ -1.72
LCD1YDR499W LAM6Q08001 693 aa4.33□□□□□ -1.72
LCD1YDR499W CLB5P30283 435 aa4.32□□□□□ -1.72
LCD1YDR499W BDP1P46678 594 aa4.32□□□□□ -1.72
LCD1YDR499W PAC1P39946 494 aaKnown RBP4.31□□□□□ -1.72
LCD1YDR499W TEA1P47988 759 aa4.31□□□□□ -1.72
LCD1YDR499W TUB4P53378 473 aa4.29□□□□□ -1.72
LCD1YDR499W NIS1P53939 407 aa4.29□□□□□ -1.72
LCD1YDR499W YNL115CP53925 644 aa4.28□□□□□ -1.72
LCD1YDR499W AGE1Q04412 482 aa4.28□□□□□ -1.72
LCD1YDR499W RTF1P53064 558 aa4.27□□□□□ -1.73
LCD1YDR499W SIT4P20604 311 aa4.26□□□□□ -1.73
LCD1YDR499W BRE2P43132 505 aa4.26□□□□□ -1.73
LCD1YDR499W PUS5Q06244 254 aa4.26□□□□□ -1.73
LCD1YDR499W YMR196WQ04336 1088 aa4.25□□□□□ -1.73
LCD1YDR499W CDC4P07834 779 aa4.25□□□□□ -1.73
LCD1YDR499W FPK1P53739 893 aa4.25□□□□□ -1.73
LCD1YDR499W MOD5P07884 428 aa4.24□□□□□ -1.73
LCD1YDR499W SLY41P22215 453 aa4.24□□□□□ -1.73
LCD1YDR499W HED1Q03937 162 aa4.24□□□□□ -1.73
LCD1YDR499W GCR2Q01722 534 aa4.23□□□□□ -1.73
LCD1YDR499W SCJ1P25303 377 aa4.22□□□□□ -1.73
LCD1YDR499W ATF2P53296 535 aa4.22□□□□□ -1.73
LCD1YDR499W GLC3P32775 704 aa4.21□□□□□ -1.74
LCD1YDR499W KXD1P53158 218 aa4.21□□□□□ -1.74
LCD1YDR499W MET32Q12041 191 aa4.21□□□□□ -1.74
LCD1YDR499W GAR1P28007 205 aaKnown RBP4.2□□□□□ -1.74
LCD1YDR499W RGA1P39083 1007 aa4.19□□□□□ -1.74
LCD1YDR499W RGA2Q06407 1009 aa4.19□□□□□ -1.74
LCD1YDR499W PDC1P06169 563 aaKnown RBP4.19□□□□□ -1.74
LCD1YDR499W ASH1P34233 588 aa4.19□□□□□ -1.74
LCD1YDR499W HXT10P43581 546 aa4.19□□□□□ -1.74
LCD1YDR499W TBF1Q02457 562 aa4.19□□□□□ -1.74
LCD1YDR499W YDL206WQ12424 762 aa4.18□□□□□ -1.74
LCD1YDR499W RRD1P40454 393 aaKnown RBP4.18□□□□□ -1.74
LCD1YDR499W HST2P53686 357 aa4.18□□□□□ -1.74
LCD1YDR499W YNR021WP53723 404 aaKnown RBP4.18□□□□□ -1.74
LCD1YDR499W MMP1Q12372 583 aa4.18□□□□□ -1.74
LCD1YDR499W TRM1P15565 570 aaKnown RBP4.17□□□□□ -1.74
LCD1YDR499W ESS1P22696 170 aa4.17□□□□□ -1.74
LCD1YDR499W GBP2P25555 427 aaKnown RBP RIP-Chip data4.17□□□□□ -1.74not detected
LCD1YDR499W PUS6P53294 404 aa4.17□□□□□ -1.74
LCD1YDR499W HST3P53687 447 aa4.17□□□□□ -1.74
LCD1YDR499W TYW1Q08960 810 aaKnown RBP4.17□□□□□ -1.74
LCD1YDR499W GLN1P32288 370 aaKnown RBP4.16□□□□□ -1.74
LCD1YDR499W ALR1Q08269 859 aa4.16□□□□□ -1.74
LCD1YDR499W AFT1P22149 690 aa4.15□□□□□ -1.74
LCD1YDR499W RPA14P50106 137 aa4.15□□□□□ -1.74
LCD1YDR499W TPD3P31383 635 aa4.15□□□□□ -1.75
LCD1YDR499W SYH1Q02875 849 aaKnown RBP4.15□□□□□ -1.75
LCD1YDR499W RQC2Q12532 1038 aaKnown RBP4.15□□□□□ -1.75
LCD1YDR499W YJU3P28321 313 aa4.14□□□□□ -1.75
LCD1YDR499W KIP2P28743 706 aa4.14□□□□□ -1.75
LCD1YDR499W MET22P32179 357 aa4.14□□□□□ -1.75
LCD1YDR499W YPR097WQ06839 1073 aa4.14□□□□□ -1.75
LCD1YDR499W BUB1P41695 1021 aaKnown RBP RIP-Chip data4.13□□□□□ -1.75not detected
LCD1YDR499W YJR115WP47152 169 aa4.13□□□□□ -1.75
LCD1YDR499W YPL062WQ02781 134 aa4.13□□□□□ -1.75
LCD1YDR499W IXR1P33417 597 aa4.12□□□□□ -1.75
LCD1YDR499W KTR1P27810 393 aaKnown RBP4.11□□□□□ -1.75
LCD1YDR499W PKH3Q03306 898 aaPredicted RBP4.11□□□□□ -1.75
LCD1YDR499W YDR444WQ04093 687 aa4.11□□□□□ -1.75
LCD1YDR499W ENV9Q08651 330 aa4.11□□□□□ -1.75
LCD1YDR499W AIM7Q12156 149 aa4.1□□□□□ -1.75
LCD1YDR499W UGA3P26370 528 aa4.09□□□□□ -1.75
LCD1YDR499W ARG8P18544 423 aa4.09□□□□□ -1.76
LCD1YDR499W CSN12P47130 423 aa4.09□□□□□ -1.76
LCD1YDR499W MSB3P48566 633 aaPredicted RBP4.09□□□□□ -1.76
LCD1YDR499W ITT1Q04638 464 aa4.09□□□□□ -1.76
LCD1YDR499W LCB5Q06147 687 aaKnown RBP4.08□□□□□ -1.76
LCD1YDR499W RSC30P38781 883 aa4.07□□□□□ -1.76
LCD1YDR499W SRF1Q12516 437 aa4.07□□□□□ -1.76
LCD1YDR499W PTK2P47116 818 aaKnown RBP4.06□□□□□ -1.76
LCD1YDR499W VAC17P25591 423 aa4.06□□□□□ -1.76
LCD1YDR499W MRT4P33201 236 aaKnown RBP4.05□□□□□ -1.76
LCD1YDR499W APP1P53933 587 aa4.05□□□□□ -1.76
Retrieved 100 of 5,963 RNA–protein pairs in 64.1 ms