RNA–Protein interactions for RNA: YDR299W

BFR2, Transcript of Component of the SSU and 90S preribosomes, yeastyeast

Gene BFR2, Length 1,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BFR2YDR299W YDR444WQ04093 687 aa3.04□□□□□ -1.92
BFR2YDR299W MVP1P40959 511 aaKnown RBP3.03□□□□□ -1.92
BFR2YDR299W LAM6Q08001 693 aa3.03□□□□□ -1.92
BFR2YDR299W RRN7P40992 514 aa3.02□□□□□ -1.93
BFR2YDR299W LSB3P43603 459 aaKnown RBP3.02□□□□□ -1.93
BFR2YDR299W FRK1Q03002 865 aaPredicted RBP3.02□□□□□ -1.93
BFR2YDR299W YPR109WQ06104 294 aa3.02□□□□□ -1.93
BFR2YDR299W TY1A-DR4O74302 440 aa3.01□□□□□ -1.93
BFR2YDR299W TY1A-HP0C2I4 478 aaKnown RBP3.01□□□□□ -1.93
BFR2YDR299W TY1A-AP0CX57 440 aa3.01□□□□□ -1.93
BFR2YDR299W TY1A-PR1P0CX58 440 aa3.01□□□□□ -1.93
BFR2YDR299W TY1A-ORP0CX59 440 aa3.01□□□□□ -1.93
BFR2YDR299W TY1A-PR2P0CX60 440 aa3.01□□□□□ -1.93
BFR2YDR299W TY1A-DR5P0CX65 440 aa3.01□□□□□ -1.93
BFR2YDR299W TY1A-ER2P0CX66 440 aa3.01□□□□□ -1.93
BFR2YDR299W TY1A-GR3P0CX67 440 aa3.01□□□□□ -1.93
BFR2YDR299W TY1A-LR1P0CX68 440 aa3.01□□□□□ -1.93
BFR2YDR299W TY1A-MR2P0CX69 440 aa3.01□□□□□ -1.93
BFR2YDR299W PAT1P25644 796 aaKnown RBP3.01□□□□□ -1.93
BFR2YDR299W TY1A-JR2P47099 440 aa3.01□□□□□ -1.93
BFR2YDR299W TY1A-DR1Q03856 440 aa3.01□□□□□ -1.93
BFR2YDR299W TY1A-ML1Q04706 440 aaKnown RBP3.01□□□□□ -1.93
BFR2YDR299W TY1A-BRQ12217 440 aa3.01□□□□□ -1.93
BFR2YDR299W TY1A-NL2Q12470 440 aa3.01□□□□□ -1.93
BFR2YDR299W TY1A-GR2Q12485 440 aa3.01□□□□□ -1.93
BFR2YDR299W CDC4P07834 779 aa3.01□□□□□ -1.93
BFR2YDR299W SEC2P17065 759 aa3.01□□□□□ -1.93
BFR2YDR299W RGR1P19263 1082 aa3.01□□□□□ -1.93
BFR2YDR299W PBS2P08018 668 aa2.99□□□□□ -1.93
BFR2YDR299W KEX2P13134 814 aa2.99□□□□□ -1.93
BFR2YDR299W BDP1P46678 594 aa2.99□□□□□ -1.93
BFR2YDR299W CKB1P43639 278 aa2.98□□□□□ -1.93
BFR2YDR299W ERF2Q06551 359 aa2.97□□□□□ -1.93
BFR2YDR299W MAM3Q12296 706 aa2.97□□□□□ -1.93
BFR2YDR299W PSE1P32337 1089 aaKnown RBP2.96□□□□□ -1.94
BFR2YDR299W CLB5P30283 435 aa2.95□□□□□ -1.94
BFR2YDR299W PAC1P39946 494 aaKnown RBP2.95□□□□□ -1.94
BFR2YDR299W IES2P40154 320 aa2.94□□□□□ -1.94
BFR2YDR299W HED1Q03937 162 aa2.94□□□□□ -1.94
BFR2YDR299W LCB5Q06147 687 aaKnown RBP2.94□□□□□ -1.94
BFR2YDR299W TRK2P28584 889 aa2.93□□□□□ -1.94
BFR2YDR299W TUB4P53378 473 aa2.93□□□□□ -1.94
BFR2YDR299W MET32Q12041 191 aa2.93□□□□□ -1.94
BFR2YDR299W DMA1P38823 416 aa2.92□□□□□ -1.94
BFR2YDR299W TEA1P47988 759 aa2.92□□□□□ -1.94
BFR2YDR299W RTF1P53064 558 aa2.92□□□□□ -1.94
BFR2YDR299W HST3P53687 447 aa2.92□□□□□ -1.94
BFR2YDR299W PUS5Q06244 254 aa2.92□□□□□ -1.94
BFR2YDR299W DSF2P38213 736 aa2.91□□□□□ -1.94
BFR2YDR299W YNL115CP53925 644 aa2.91□□□□□ -1.94
BFR2YDR299W AGE1Q04412 482 aa2.91□□□□□ -1.94
BFR2YDR299W SPB4P25808 606 aaPredicted RBP2.9□□□□□ -1.94
BFR2YDR299W ASH1P34233 588 aa2.9□□□□□ -1.94
BFR2YDR299W MOD5P07884 428 aa2.9□□□□□ -1.95
BFR2YDR299W AFT1P22149 690 aa2.9□□□□□ -1.95
BFR2YDR299W KXD1P53158 218 aa2.9□□□□□ -1.95
BFR2YDR299W YMR196WQ04336 1088 aa2.9□□□□□ -1.95
BFR2YDR299W RRD1P40454 393 aaKnown RBP2.89□□□□□ -1.95
BFR2YDR299W NUP42P49686 430 aaKnown RBP2.89□□□□□ -1.95
BFR2YDR299W NIS1P53939 407 aa2.89□□□□□ -1.95
BFR2YDR299W SLY41P22215 453 aa2.88□□□□□ -1.95
BFR2YDR299W TBF1Q02457 562 aa2.88□□□□□ -1.95
BFR2YDR299W SAS10Q12136 610 aaPredicted RBP2.88□□□□□ -1.95
BFR2YDR299W SIT4P20604 311 aa2.87□□□□□ -1.95
BFR2YDR299W DIT2P21595 489 aa2.86□□□□□ -1.95
BFR2YDR299W HXT10P43581 546 aa2.86□□□□□ -1.95
BFR2YDR299W YJR115WP47152 169 aa2.86□□□□□ -1.95
BFR2YDR299W SYH1Q02875 849 aaKnown RBP2.86□□□□□ -1.95
BFR2YDR299W PUS1Q12211 544 aaKnown RBP2.86□□□□□ -1.95
BFR2YDR299W PDC1P06169 563 aaKnown RBP2.86□□□□□ -1.95
BFR2YDR299W KIP2P28743 706 aa2.86□□□□□ -1.95
BFR2YDR299W ACO2P39533 789 aa2.86□□□□□ -1.95
BFR2YDR299W ICP55P40051 511 aa2.86□□□□□ -1.95
BFR2YDR299W FPK1P53739 893 aa2.86□□□□□ -1.95
BFR2YDR299W UGA3P26370 528 aa2.85□□□□□ -1.95
BFR2YDR299W ALR1Q08269 859 aa2.85□□□□□ -1.95
BFR2YDR299W YDL206WQ12424 762 aa2.85□□□□□ -1.95
BFR2YDR299W TPD3P31383 635 aa2.84□□□□□ -1.95
BFR2YDR299W SRF1Q12516 437 aa2.84□□□□□ -1.95
BFR2YDR299W IXR1P33417 597 aa2.83□□□□□ -1.96
BFR2YDR299W MSB3P48566 633 aaPredicted RBP2.83□□□□□ -1.96
BFR2YDR299W RPA14P50106 137 aa2.83□□□□□ -1.96
BFR2YDR299W PUS6P53294 404 aa2.83□□□□□ -1.96
BFR2YDR299W TRM1P15565 570 aaKnown RBP2.82□□□□□ -1.96
BFR2YDR299W SCJ1P25303 377 aa2.82□□□□□ -1.96
BFR2YDR299W ATF2P53296 535 aa2.82□□□□□ -1.96
BFR2YDR299W CAF120P53836 1060 aa2.82□□□□□ -1.96
BFR2YDR299W MMP1Q12372 583 aa2.82□□□□□ -1.96
BFR2YDR299W PTK2P47116 818 aaKnown RBP2.81□□□□□ -1.96
BFR2YDR299W YGR035CP53222 116 aa2.81□□□□□ -1.96
BFR2YDR299W HST2P53686 357 aa2.81□□□□□ -1.96
BFR2YDR299W YLR346CQ06139 101 aa2.81□□□□□ -1.96
BFR2YDR299W YPR097WQ06839 1073 aa2.81□□□□□ -1.96
BFR2YDR299W TYW1Q08960 810 aaKnown RBP2.81□□□□□ -1.96
BFR2YDR299W ESS1P22696 170 aa2.8□□□□□ -1.96
BFR2YDR299W GLN1P32288 370 aaKnown RBP2.8□□□□□ -1.96
BFR2YDR299W GLC3P32775 704 aa2.79□□□□□ -1.96
BFR2YDR299W BUB1P41695 1021 aaKnown RBP RIP-Chip data2.79□□□□□ -1.96not detected
BFR2YDR299W OPT2Q06593 877 aa2.79□□□□□ -1.96
BFR2YDR299W YJU3P28321 313 aa2.78□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 9.7 ms