RNA–Protein interactions for RNA: YDR254W

CHL4, Transcript of Outer kinetochore protein required for chromosome stability, yeastyeast

Gene CHL4, Length 1,377 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CHL4YDR254W TY1A-DR4O74302 440 aa8.61□□□□□ -1.03
CHL4YDR254W TY1A-HP0C2I4 478 aaKnown RBP8.61□□□□□ -1.03
CHL4YDR254W TY1A-AP0CX57 440 aa8.61□□□□□ -1.03
CHL4YDR254W TY1A-PR1P0CX58 440 aa8.61□□□□□ -1.03
CHL4YDR254W TY1A-ORP0CX59 440 aa8.61□□□□□ -1.03
CHL4YDR254W TY1A-PR2P0CX60 440 aa8.61□□□□□ -1.03
CHL4YDR254W TY1A-DR5P0CX65 440 aa8.61□□□□□ -1.03
CHL4YDR254W TY1A-ER2P0CX66 440 aa8.61□□□□□ -1.03
CHL4YDR254W TY1A-GR3P0CX67 440 aa8.61□□□□□ -1.03
CHL4YDR254W TY1A-LR1P0CX68 440 aa8.61□□□□□ -1.03
CHL4YDR254W TY1A-MR2P0CX69 440 aa8.61□□□□□ -1.03
CHL4YDR254W SEC2P17065 759 aa8.61□□□□□ -1.03
CHL4YDR254W TY1A-JR2P47099 440 aa8.61□□□□□ -1.03
CHL4YDR254W TY1A-DR1Q03856 440 aa8.61□□□□□ -1.03
CHL4YDR254W TY1A-ML1Q04706 440 aaKnown RBP8.61□□□□□ -1.03
CHL4YDR254W TY1A-BRQ12217 440 aa8.61□□□□□ -1.03
CHL4YDR254W TY1A-NL2Q12470 440 aa8.61□□□□□ -1.03
CHL4YDR254W TY1A-GR2Q12485 440 aa8.61□□□□□ -1.03
CHL4YDR254W RGR1P19263 1082 aa8.61□□□□□ -1.03
CHL4YDR254W DMA2P53924 522 aa8.6□□□□□ -1.03
CHL4YDR254W PAT1P25644 796 aaKnown RBP8.59□□□□□ -1.03
CHL4YDR254W GCR2Q01722 534 aa8.59□□□□□ -1.03
CHL4YDR254W AIR1P40507 360 aaKnown RBP8.58□□□□□ -1.04
CHL4YDR254W LAM6Q08001 693 aa8.58□□□□□ -1.04
CHL4YDR254W BRE2P43132 505 aa8.57□□□□□ -1.04
CHL4YDR254W RRN7P40992 514 aa8.56□□□□□ -1.04
CHL4YDR254W CLA4P48562 842 aa8.55□□□□□ -1.04
CHL4YDR254W FRK1Q03002 865 aaPredicted RBP8.55□□□□□ -1.04
CHL4YDR254W CKB1P43639 278 aa8.51□□□□□ -1.05
CHL4YDR254W BDP1P46678 594 aa8.51□□□□□ -1.05
CHL4YDR254W CDC4P07834 779 aa8.49□□□□□ -1.05
CHL4YDR254W YPL062WQ02781 134 aa8.49□□□□□ -1.05
CHL4YDR254W RLF2Q12495 606 aa8.49□□□□□ -1.05
CHL4YDR254W PBS2P08018 668 aa8.48□□□□□ -1.05
CHL4YDR254W KEX2P13134 814 aa8.48□□□□□ -1.05
CHL4YDR254W ERF2Q06551 359 aa8.47□□□□□ -1.05
CHL4YDR254W GBP2P25555 427 aaKnown RBP RIP-Chip data8.46□□□□□ -1.06not detected
CHL4YDR254W GAR1P28007 205 aaKnown RBP8.46□□□□□ -1.06
CHL4YDR254W PSE1P32337 1089 aaKnown RBP8.46□□□□□ -1.06
CHL4YDR254W HED1Q03937 162 aa8.46□□□□□ -1.06
CHL4YDR254W ORC1P54784 914 aaPredicted RBP8.43□□□□□ -1.06
CHL4YDR254W CLB5P30283 435 aa8.41□□□□□ -1.06
CHL4YDR254W SPB4P25808 606 aaPredicted RBP8.38□□□□□ -1.07
CHL4YDR254W PAC1P39946 494 aaKnown RBP8.38□□□□□ -1.07
CHL4YDR254W YRB30P53107 440 aaPredicted RBP8.38□□□□□ -1.07
CHL4YDR254W MAM3Q12296 706 aa8.38□□□□□ -1.07
CHL4YDR254W DSF2P38213 736 aa8.37□□□□□ -1.07
CHL4YDR254W RPN1P38764 993 aaKnown RBP8.36□□□□□ -1.07
CHL4YDR254W MOD5P07884 428 aa8.35□□□□□ -1.07
CHL4YDR254W TUB4P53378 473 aa8.35□□□□□ -1.07
CHL4YDR254W MET22P32179 357 aa8.35□□□□□ -1.07
CHL4YDR254W RTF1P53064 558 aa8.35□□□□□ -1.07
CHL4YDR254W AGE1Q04412 482 aa8.34□□□□□ -1.07
CHL4YDR254W YNL115CP53925 644 aa8.33□□□□□ -1.08
CHL4YDR254W ASH1P34233 588 aa8.32□□□□□ -1.08
CHL4YDR254W ENV9Q08651 330 aa8.32□□□□□ -1.08
CHL4YDR254W HST3P53687 447 aa8.3□□□□□ -1.08
CHL4YDR254W PUS5Q06244 254 aa8.3□□□□□ -1.08
CHL4YDR254W MET32Q12041 191 aa8.3□□□□□ -1.08
CHL4YDR254W AFT1P22149 690 aa8.29□□□□□ -1.08
CHL4YDR254W IES2P40154 320 aa8.29□□□□□ -1.08
CHL4YDR254W TEA1P47988 759 aa8.29□□□□□ -1.08
CHL4YDR254W YDR444WQ04093 687 aa8.28□□□□□ -1.08
CHL4YDR254W SIT4P20604 311 aa8.27□□□□□ -1.09
CHL4YDR254W KXD1P53158 218 aa8.25□□□□□ -1.09
CHL4YDR254W NUP42P49686 430 aaKnown RBP8.24□□□□□ -1.09
CHL4YDR254W TOP1P04786 769 aa8.23□□□□□ -1.09
CHL4YDR254W DIT2P21595 489 aa8.22□□□□□ -1.09
CHL4YDR254W NIS1P53939 407 aa8.22□□□□□ -1.09
CHL4YDR254W LCB5Q06147 687 aaKnown RBP8.21□□□□□ -1.1
CHL4YDR254W TPD3P31383 635 aa8.2□□□□□ -1.1
CHL4YDR254W HXT10P43581 546 aa8.2□□□□□ -1.1
CHL4YDR254W YJR115WP47152 169 aa8.18□□□□□ -1.1
CHL4YDR254W SLY41P22215 453 aa8.17□□□□□ -1.1
CHL4YDR254W RRD1P40454 393 aaKnown RBP8.17□□□□□ -1.1
CHL4YDR254W SNU71P53207 620 aaKnown RBP8.17□□□□□ -1.1
CHL4YDR254W SYH1Q02875 849 aaKnown RBP8.17□□□□□ -1.1
CHL4YDR254W GLC3P32775 704 aa8.16□□□□□ -1.1
CHL4YDR254W YNR021WP53723 404 aaKnown RBP8.15□□□□□ -1.1
CHL4YDR254W YML020WQ03722 664 aa8.15□□□□□ -1.1
CHL4YDR254W YMR196WQ04336 1088 aa8.15□□□□□ -1.1
CHL4YDR254W PDC1P06169 563 aaKnown RBP8.14□□□□□ -1.11
CHL4YDR254W FPK1P53739 893 aa8.14□□□□□ -1.11
CHL4YDR254W MSB3P48566 633 aaPredicted RBP8.12□□□□□ -1.11
CHL4YDR254W YDL176WQ12027 708 aa8.11□□□□□ -1.11
CHL4YDR254W PUS6P53294 404 aa8.1□□□□□ -1.11
CHL4YDR254W ALR1Q08269 859 aa8.1□□□□□ -1.11
CHL4YDR254W RPA14P50106 137 aa8.1□□□□□ -1.11
CHL4YDR254W TBF1Q02457 562 aa8.1□□□□□ -1.11
CHL4YDR254W UGA3P26370 528 aa8.09□□□□□ -1.12
CHL4YDR254W KIP2P28743 706 aa8.09□□□□□ -1.12
CHL4YDR254W NOP8Q08287 484 aaPredicted RBP8.07□□□□□ -1.12
CHL4YDR254W YDL206WQ12424 762 aa8.07□□□□□ -1.12
CHL4YDR254W KIN1P13185 1064 aa8.06□□□□□ -1.12
CHL4YDR254W YPR097WQ06839 1073 aa8.06□□□□□ -1.12
CHL4YDR254W SRF1Q12516 437 aa8.05□□□□□ -1.12
CHL4YDR254W BRL1P38770 471 aa8.04□□□□□ -1.12
CHL4YDR254W SCJ1P25303 377 aa8.03□□□□□ -1.12
CHL4YDR254W IXR1P33417 597 aa8.03□□□□□ -1.12
CHL4YDR254W BUB1P41695 1021 aaKnown RBP RIP-Chip data8.03□□□□□ -1.12not detected
Retrieved 100 of 5,963 RNA–protein pairs in 61.3 ms