RNA–Protein interactions for RNA: YDR126W

SWF1, Transcript of Palmitoyltransferase that acts on transmembrane proteins, yeastyeast

Gene SWF1, Length 1,011 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWF1YDR126W TY1A-MR2P0CX69 440 aa6.5□□□□□ -1.37
SWF1YDR126W GCD11P32481 527 aaKnown RBP6.5□□□□□ -1.37
SWF1YDR126W DSF2P38213 736 aa6.5□□□□□ -1.37
SWF1YDR126W TY1A-JR2P47099 440 aa6.5□□□□□ -1.37
SWF1YDR126W TY1A-DR1Q03856 440 aa6.5□□□□□ -1.37
SWF1YDR126W TY1A-ML1Q04706 440 aaKnown RBP6.5□□□□□ -1.37
SWF1YDR126W TY1A-BRQ12217 440 aa6.5□□□□□ -1.37
SWF1YDR126W MAM3Q12296 706 aa6.5□□□□□ -1.37
SWF1YDR126W TY1A-NL2Q12470 440 aa6.5□□□□□ -1.37
SWF1YDR126W TY1A-GR2Q12485 440 aa6.5□□□□□ -1.37
SWF1YDR126W TRK1P12685 1235 aa6.49□□□□□ -1.37
SWF1YDR126W SEC2P17065 759 aa6.48□□□□□ -1.37
SWF1YDR126W CLB5P30283 435 aa6.47□□□□□ -1.37
SWF1YDR126W SPT16P32558 1035 aaKnown RBP6.46□□□□□ -1.38
SWF1YDR126W IES2P40154 320 aa6.44□□□□□ -1.38
SWF1YDR126W PAT1P25644 796 aaKnown RBP6.43□□□□□ -1.38
SWF1YDR126W CST6P40535 587 aa6.43□□□□□ -1.38
SWF1YDR126W RRN7P40992 514 aa6.42□□□□□ -1.38
SWF1YDR126W KEX2P13134 814 aa6.41□□□□□ -1.38
SWF1YDR126W NUP42P49686 430 aaKnown RBP6.41□□□□□ -1.38
SWF1YDR126W LAM6Q08001 693 aa6.41□□□□□ -1.38
SWF1YDR126W SPB4P25808 606 aaPredicted RBP6.4□□□□□ -1.38
SWF1YDR126W RTF1P53064 558 aa6.39□□□□□ -1.39
SWF1YDR126W ERF2Q06551 359 aa6.39□□□□□ -1.39
SWF1YDR126W TEA1P47988 759 aa6.36□□□□□ -1.39
SWF1YDR126W SIT4P20604 311 aa6.35□□□□□ -1.39
SWF1YDR126W BDP1P46678 594 aa6.35□□□□□ -1.39
SWF1YDR126W YNL115CP53925 644 aa6.35□□□□□ -1.39
SWF1YDR126W FRK1Q03002 865 aaPredicted RBP6.35□□□□□ -1.39
SWF1YDR126W DIT2P21595 489 aa6.34□□□□□ -1.39
SWF1YDR126W AIR1P40507 360 aaKnown RBP6.34□□□□□ -1.39
SWF1YDR126W CLA4P48562 842 aa6.34□□□□□ -1.39
SWF1YDR126W AGE1Q04412 482 aa6.34□□□□□ -1.39
SWF1YDR126W PAC1P39946 494 aaKnown RBP6.33□□□□□ -1.4
SWF1YDR126W CDC4P07834 779 aa6.32□□□□□ -1.4
SWF1YDR126W MOD5P07884 428 aa6.32□□□□□ -1.4
SWF1YDR126W TUB4P53378 473 aa6.32□□□□□ -1.4
SWF1YDR126W BRE2P43132 505 aa6.31□□□□□ -1.4
SWF1YDR126W NIS1P53939 407 aa6.31□□□□□ -1.4
SWF1YDR126W HED1Q03937 162 aa6.31□□□□□ -1.4
SWF1YDR126W GCR2Q01722 534 aa6.29□□□□□ -1.4
SWF1YDR126W RGA1P39083 1007 aa6.27□□□□□ -1.41
SWF1YDR126W FPK1P53739 893 aa6.26□□□□□ -1.41
SWF1YDR126W TPD3P31383 635 aa6.25□□□□□ -1.41
SWF1YDR126W YMR196WQ04336 1088 aa6.25□□□□□ -1.41
SWF1YDR126W KXD1P53158 218 aa6.23□□□□□ -1.41
SWF1YDR126W SLY41P22215 453 aa6.22□□□□□ -1.41
SWF1YDR126W HST2P53686 357 aa6.22□□□□□ -1.41
SWF1YDR126W YNR021WP53723 404 aaKnown RBP6.22□□□□□ -1.41
SWF1YDR126W ATF2P53296 535 aa6.21□□□□□ -1.42
SWF1YDR126W PUS5Q06244 254 aa6.21□□□□□ -1.42
SWF1YDR126W MET32Q12041 191 aa6.21□□□□□ -1.42
SWF1YDR126W RQC2Q12532 1038 aaKnown RBP6.21□□□□□ -1.42
SWF1YDR126W PDC1P06169 563 aaKnown RBP6.2□□□□□ -1.42
SWF1YDR126W RRD1P40454 393 aaKnown RBP6.2□□□□□ -1.42
SWF1YDR126W HXT10P43581 546 aa6.2□□□□□ -1.42
SWF1YDR126W AFT1P22149 690 aa6.19□□□□□ -1.42
SWF1YDR126W ASH1P34233 588 aa6.19□□□□□ -1.42
SWF1YDR126W PUS6P53294 404 aa6.19□□□□□ -1.42
SWF1YDR126W RPA14P50106 137 aa6.18□□□□□ -1.42
SWF1YDR126W TBF1Q02457 562 aa6.18□□□□□ -1.42
SWF1YDR126W BUB1P41695 1021 aaKnown RBP RIP-Chip data6.17□□□□□ -1.42not detected
SWF1YDR126W HST3P53687 447 aa6.17□□□□□ -1.42
SWF1YDR126W ALR1Q08269 859 aa6.17□□□□□ -1.42
SWF1YDR126W GLC3P32775 704 aa6.16□□□□□ -1.42
SWF1YDR126W YPL062WQ02781 134 aa6.16□□□□□ -1.42
SWF1YDR126W SYH1Q02875 849 aaKnown RBP6.16□□□□□ -1.42
SWF1YDR126W RGA2Q06407 1009 aa6.16□□□□□ -1.42
SWF1YDR126W YPR097WQ06839 1073 aa6.16□□□□□ -1.42
SWF1YDR126W MMP1Q12372 583 aa6.16□□□□□ -1.42
SWF1YDR126W TRM1P15565 570 aaKnown RBP6.15□□□□□ -1.42
SWF1YDR126W SCJ1P25303 377 aa6.15□□□□□ -1.42
SWF1YDR126W GLN1P32288 370 aaKnown RBP6.15□□□□□ -1.42
SWF1YDR126W ENV9Q08651 330 aa6.15□□□□□ -1.42
SWF1YDR126W YDL206WQ12424 762 aa6.15□□□□□ -1.42
SWF1YDR126W GAR1P28007 205 aaKnown RBP6.14□□□□□ -1.43
SWF1YDR126W MET22P32179 357 aa6.14□□□□□ -1.43
SWF1YDR126W AIM7Q12156 149 aa6.13□□□□□ -1.43
SWF1YDR126W GBP2P25555 427 aaKnown RBP RIP-Chip data6.12□□□□□ -1.43not detected
SWF1YDR126W ESS1P22696 170 aa6.1□□□□□ -1.43
SWF1YDR126W MSB3P48566 633 aaPredicted RBP6.1□□□□□ -1.43
SWF1YDR126W YJR115WP47152 169 aa6.09□□□□□ -1.43
SWF1YDR126W YDR444WQ04093 687 aa6.09□□□□□ -1.43
SWF1YDR126W KIP2P28743 706 aa6.08□□□□□ -1.44
SWF1YDR126W IXR1P33417 597 aa6.08□□□□□ -1.44
SWF1YDR126W LCB5Q06147 687 aaKnown RBP6.08□□□□□ -1.44
SWF1YDR126W YJU3P28321 313 aa6.07□□□□□ -1.44
SWF1YDR126W MRT4P33201 236 aaKnown RBP6.07□□□□□ -1.44
SWF1YDR126W TYW1Q08960 810 aaKnown RBP6.07□□□□□ -1.44
SWF1YDR126W RSC30P38781 883 aa6.06□□□□□ -1.44
SWF1YDR126W RTT106P40161 455 aa6.06□□□□□ -1.44
SWF1YDR126W KTR1P27810 393 aaKnown RBP6.05□□□□□ -1.44
SWF1YDR126W UGA3P26370 528 aa6.04□□□□□ -1.44
SWF1YDR126W VAC17P25591 423 aa6.03□□□□□ -1.44
SWF1YDR126W CSN12P47130 423 aa6.03□□□□□ -1.44
SWF1YDR126W PKH3Q03306 898 aaPredicted RBP6.03□□□□□ -1.44
SWF1YDR126W PTK2P47116 818 aaKnown RBP6.01□□□□□ -1.45
SWF1YDR126W ARG8P18544 423 aa6□□□□□ -1.45
SWF1YDR126W YDL176WQ12027 708 aa6□□□□□ -1.45
SWF1YDR126W LEU3P08638 886 aa5.99□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms