RNA–Protein interactions for RNA: YDR126W

SWF1, Transcript of Palmitoyltransferase that acts on transmembrane proteins, yeastyeast

Gene SWF1, Length 1,011 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWF1YDR126W MTC1P47018 478 aaKnown RBP12.44□□□□□ -0.42
SWF1YDR126W DRS1P32892 752 aaKnown RBP11.56□□□□□ -0.56
SWF1YDR126W FAP1P53971 965 aa11.18□□□□□ -0.62
SWF1YDR126W PRY3P47033 881 aa10.52□□□□□ -0.73
SWF1YDR126W PRI1P10363 409 aa10.5□□□□□ -0.73
SWF1YDR126W AAD16Q02895 342 aa10.44□□□□□ -0.74
SWF1YDR126W ISW2Q08773 1120 aa10.33□□□□□ -0.76
SWF1YDR126W RPG1P38249 964 aaKnown RBP10.19□□□□□ -0.78
SWF1YDR126W DIP2Q12220 943 aaPredicted RBP10.16□□□□□ -0.78
SWF1YDR126W YCK3P39962 524 aa9.93□□□□□ -0.82
SWF1YDR126W HAA1Q12753 694 aaKnown RBP9.92□□□□□ -0.82
SWF1YDR126W TSR3Q12094 313 aaKnown RBP9.89□□□□□ -0.83
SWF1YDR126W RSE1Q04693 1361 aaKnown RBP9.85□□□□□ -0.83
SWF1YDR126W AVT3P36062 692 aa9.79□□□□□ -0.84
SWF1YDR126W BFR2Q06631 534 aaKnown RBP9.6□□□□□ -0.87
SWF1YDR126W MRPL32P25348 183 aa9.54□□□□□ -0.88
SWF1YDR126W RPL17AP05740 184 aaKnown RBP9.51□□□□□ -0.89
SWF1YDR126W RPL17BP46990 184 aaKnown RBP9.51□□□□□ -0.89
SWF1YDR126W REB1P21538 810 aa9.48□□□□□ -0.89
SWF1YDR126W YGL015CP33199 130 aa9.17□□□□□ -0.94
SWF1YDR126W SPT21P35209 758 aa9.13□□□□□ -0.95
SWF1YDR126W CDC27P38042 758 aa9.04□□□□□ -0.96
SWF1YDR126W YKR023WP36119 530 aaKnown RBP9.01□□□□□ -0.97
SWF1YDR126W UBP10P53874 792 aaPredicted RBP8.84□□□□□ -0.99
SWF1YDR126W TFC8Q12308 588 aa8.84□□□□□ -0.99
SWF1YDR126W RIM101P33400 625 aa8.81□□□□□ -1
SWF1YDR126W HOP09932 586 aa8.8□□□□□ -1
SWF1YDR126W MAP2P38174 421 aaKnown RBP8.76□□□□□ -1.01
SWF1YDR126W DCD1P06773 312 aa8.74□□□□□ -1.01
SWF1YDR126W SCY1P53009 804 aa8.58□□□□□ -1.04
SWF1YDR126W BCH2P36122 765 aa8.54□□□□□ -1.04
SWF1YDR126W SLX5P32828 619 aaKnown RBP8.5□□□□□ -1.05
SWF1YDR126W OXP1P28273 1286 aa8.48□□□□□ -1.05
SWF1YDR126W TIF4632P39936 914 aaKnown RBP8.47□□□□□ -1.05
SWF1YDR126W TFA1P36100 482 aa8.45□□□□□ -1.06
SWF1YDR126W TGL3P40308 642 aa8.44□□□□□ -1.06
SWF1YDR126W BUD31P25337 157 aaPredicted RBP8.42□□□□□ -1.06
SWF1YDR126W YIL055CP40523 627 aaKnown RBP8.36□□□□□ -1.07
SWF1YDR126W PTP3P40048 928 aa8.35□□□□□ -1.07
SWF1YDR126W EPS1P40557 701 aa8.33□□□□□ -1.08
SWF1YDR126W BDF1P35817 686 aa8.29□□□□□ -1.08
SWF1YDR126W RSM7P47150 247 aa8.26□□□□□ -1.09
SWF1YDR126W BBC1P47068 1157 aa8.2□□□□□ -1.1
SWF1YDR126W YAH1Q12184 172 aaKnown RBP8.2□□□□□ -1.1
SWF1YDR126W UBP9P39967 754 aa8.19□□□□□ -1.1
SWF1YDR126W AI2P03876 854 aa8.17□□□□□ -1.1
SWF1YDR126W YLR271WQ06152 274 aa8.1□□□□□ -1.11
SWF1YDR126W NSR1P27476 414 aaKnown RBP RIP-Chip data8.09□□□□□ -1.11not detected
SWF1YDR126W MST1P07236 462 aa8.08□□□□□ -1.12
SWF1YDR126W YOR238WQ08634 303 aa8.04□□□□□ -1.12
SWF1YDR126W SSP1P38871 571 aa8□□□□□ -1.13
SWF1YDR126W YAP5P40574 245 aa8□□□□□ -1.13
SWF1YDR126W PSD2P53037 1138 aaKnown RBP8□□□□□ -1.13
SWF1YDR126W SIS1P25294 352 aaKnown RBP7.99□□□□□ -1.13
SWF1YDR126W ARP8Q12386 881 aaKnown RBP RIP-Chip data7.97□□□□□ -1.13not detected
SWF1YDR126W YBL029C-AQ3E756 94 aa7.91□□□□□ -1.14
SWF1YDR126W MRM1P25270 412 aa7.86□□□□□ -1.15
SWF1YDR126W VNX1P42839 908 aa7.85□□□□□ -1.15
SWF1YDR126W MGA2P40578 1113 aa7.83□□□□□ -1.16
SWF1YDR126W GTT3P39996 337 aa7.8□□□□□ -1.16
SWF1YDR126W CST9Q06032 482 aa7.79□□□□□ -1.16
SWF1YDR126W WSC3Q12215 556 aa7.79□□□□□ -1.16
SWF1YDR126W SPP1Q03012 353 aa7.78□□□□□ -1.16
SWF1YDR126W TIF11P38912 153 aaKnown RBP7.73□□□□□ -1.17
SWF1YDR126W PIB1Q06651 286 aa7.73□□□□□ -1.17
SWF1YDR126W RTG3P38165 486 aa7.72□□□□□ -1.17
SWF1YDR126W VPS29P38759 282 aa7.71□□□□□ -1.18
SWF1YDR126W YMR1P47147 688 aaKnown RBP RIP-Chip data7.71□□□□□ -1.18not detected
SWF1YDR126W DBP1P24784 617 aaKnown RBP7.65□□□□□ -1.18
SWF1YDR126W MSB4Q12317 492 aa7.65□□□□□ -1.18
SWF1YDR126W FKH1P40466 484 aa7.63□□□□□ -1.19
SWF1YDR126W STS1P38637 319 aa7.62□□□□□ -1.19
SWF1YDR126W ULI1P43604 169 aa7.62□□□□□ -1.19
SWF1YDR126W IOC2Q12072 812 aa7.61□□□□□ -1.19
SWF1YDR126W AIR2Q12476 344 aaKnown RBP7.61□□□□□ -1.19
SWF1YDR126W EAP1P36041 632 aaKnown RBP7.6□□□□□ -1.19
SWF1YDR126W RCR1P38212 213 aa7.6□□□□□ -1.19
SWF1YDR126W YFR006WP43590 535 aa7.6□□□□□ -1.19
SWF1YDR126W YOL036WQ08206 761 aa7.6□□□□□ -1.19
SWF1YDR126W VMA1P17255 1071 aaKnown RBP7.59□□□□□ -1.19
SWF1YDR126W SAM3Q08986 587 aa7.58□□□□□ -1.2
SWF1YDR126W LDB19Q12502 818 aa7.58□□□□□ -1.2
SWF1YDR126W SET4P42948 560 aa7.56□□□□□ -1.2
SWF1YDR126W YJL171CP46992 396 aa7.53□□□□□ -1.2
SWF1YDR126W TRP5P00931 707 aaKnown RBP7.51□□□□□ -1.21
SWF1YDR126W ABP1P15891 592 aaKnown RBP7.48□□□□□ -1.21
SWF1YDR126W RTG1P32607 177 aa7.46□□□□□ -1.22
SWF1YDR126W YNL035CP53962 389 aaKnown RBP7.45□□□□□ -1.22
SWF1YDR126W BMT6Q12291 365 aa7.45□□□□□ -1.22
SWF1YDR126W SEC61P32915 480 aa7.44□□□□□ -1.22
SWF1YDR126W GYP5Q12344 894 aa7.44□□□□□ -1.22
SWF1YDR126W NCR1Q12200 1170 aa7.42□□□□□ -1.22
SWF1YDR126W MAK11P20484 414 aaKnown RBP7.41□□□□□ -1.22
SWF1YDR126W RAM2P29703 316 aa7.41□□□□□ -1.22
SWF1YDR126W JIP4Q03361 876 aa7.4□□□□□ -1.22
SWF1YDR126W HTA1P04911 132 aaKnown RBP7.39□□□□□ -1.23
SWF1YDR126W HTA2P04912 132 aa7.39□□□□□ -1.23
SWF1YDR126W DAN4P47179 1161 aa7.37□□□□□ -1.23
SWF1YDR126W DCW1P36091 449 aa7.36□□□□□ -1.23
SWF1YDR126W TFG1P41895 735 aaPredicted RBP7.35□□□□□ -1.23
Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms