RNA–Protein interactions for RNA: YCR020W-B

HTL1, Transcript of Component of the RSC chromatin remodeling complex, yeastyeast

Gene HTL1, Length 237 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HTL1YCR020W-B GCD11P32481 527 aaKnown RBP5.19□□□□□ -1.58
HTL1YCR020W-B CST6P40535 587 aa5.19□□□□□ -1.58
HTL1YCR020W-B CLA4P48562 842 aa5.19□□□□□ -1.58
HTL1YCR020W-B MAK21Q12176 1025 aaKnown RBP5.19□□□□□ -1.58
HTL1YCR020W-B MRF1P30775 413 aaPredicted RBP5.18□□□□□ -1.58
HTL1YCR020W-B MVP1P40959 511 aaKnown RBP5.18□□□□□ -1.58
HTL1YCR020W-B SEC2P17065 759 aa5.17□□□□□ -1.58
HTL1YCR020W-B AIR1P40507 360 aaKnown RBP5.17□□□□□ -1.58
HTL1YCR020W-B YPR109WQ06104 294 aa5.17□□□□□ -1.58
HTL1YCR020W-B ERG12P07277 443 aa5.15□□□□□ -1.59
HTL1YCR020W-B PBS2P08018 668 aa5.15□□□□□ -1.59
HTL1YCR020W-B DMA1P38823 416 aa5.15□□□□□ -1.59
HTL1YCR020W-B RGR1P19263 1082 aa5.14□□□□□ -1.59
HTL1YCR020W-B CKB1P43639 278 aa5.14□□□□□ -1.59
HTL1YCR020W-B LAM6Q08001 693 aa5.14□□□□□ -1.59
HTL1YCR020W-B SPT16P32558 1035 aaKnown RBP5.13□□□□□ -1.59
HTL1YCR020W-B BRE2P43132 505 aa5.1□□□□□ -1.59
HTL1YCR020W-B KEX2P13134 814 aa5.09□□□□□ -1.59
HTL1YCR020W-B RRN7P40992 514 aa5.09□□□□□ -1.59
HTL1YCR020W-B MAM3Q12296 706 aa5.09□□□□□ -1.59
HTL1YCR020W-B FRK1Q03002 865 aaPredicted RBP5.08□□□□□ -1.6
HTL1YCR020W-B PAT1P25644 796 aaKnown RBP5.07□□□□□ -1.6
HTL1YCR020W-B ERF2Q06551 359 aa5.07□□□□□ -1.6
HTL1YCR020W-B SPB4P25808 606 aaPredicted RBP5.06□□□□□ -1.6
HTL1YCR020W-B PSE1P32337 1089 aaKnown RBP5.06□□□□□ -1.6
HTL1YCR020W-B BDP1P46678 594 aa5.06□□□□□ -1.6
HTL1YCR020W-B IES2P40154 320 aa5.05□□□□□ -1.6
HTL1YCR020W-B CDC4P07834 779 aa5.03□□□□□ -1.6
HTL1YCR020W-B PAC1P39946 494 aaKnown RBP5.02□□□□□ -1.61
HTL1YCR020W-B SAS10Q12136 610 aaPredicted RBP5.02□□□□□ -1.61
HTL1YCR020W-B MOD5P07884 428 aa5.01□□□□□ -1.61
HTL1YCR020W-B GBP2P25555 427 aaKnown RBP RIP-Chip data5.01□□□□□ -1.61not detected
HTL1YCR020W-B DSF2P38213 736 aa5.01□□□□□ -1.61
HTL1YCR020W-B AGE1Q04412 482 aa5.01□□□□□ -1.61
HTL1YCR020W-B CLB5P30283 435 aa5□□□□□ -1.61
HTL1YCR020W-B TEA1P47988 759 aa5□□□□□ -1.61
HTL1YCR020W-B GAR1P28007 205 aaKnown RBP4.99□□□□□ -1.61
HTL1YCR020W-B GCR2Q01722 534 aa4.99□□□□□ -1.61
HTL1YCR020W-B DIT2P21595 489 aa4.98□□□□□ -1.61
HTL1YCR020W-B MET22P32179 357 aa4.98□□□□□ -1.61
HTL1YCR020W-B NUP42P49686 430 aaKnown RBP4.98□□□□□ -1.61
HTL1YCR020W-B TUB4P53378 473 aa4.98□□□□□ -1.61
HTL1YCR020W-B HED1Q03937 162 aa4.98□□□□□ -1.61
HTL1YCR020W-B MET32Q12041 191 aa4.98□□□□□ -1.61
HTL1YCR020W-B YNL115CP53925 644 aa4.97□□□□□ -1.61
HTL1YCR020W-B PUS5Q06244 254 aa4.96□□□□□ -1.62
HTL1YCR020W-B NIS1P53939 407 aa4.95□□□□□ -1.62
HTL1YCR020W-B ENV9Q08651 330 aa4.95□□□□□ -1.62
HTL1YCR020W-B RTF1P53064 558 aa4.94□□□□□ -1.62
HTL1YCR020W-B YMR196WQ04336 1088 aa4.93□□□□□ -1.62
HTL1YCR020W-B SIT4P20604 311 aa4.92□□□□□ -1.62
HTL1YCR020W-B SLY41P22215 453 aa4.92□□□□□ -1.62
HTL1YCR020W-B YDL176WQ12027 708 aa4.92□□□□□ -1.62
HTL1YCR020W-B ASH1P34233 588 aa4.91□□□□□ -1.62
HTL1YCR020W-B KXD1P53158 218 aa4.91□□□□□ -1.62
HTL1YCR020W-B FPK1P53739 893 aa4.91□□□□□ -1.62
HTL1YCR020W-B AFT1P22149 690 aa4.9□□□□□ -1.63
HTL1YCR020W-B SCJ1P25303 377 aa4.89□□□□□ -1.63
HTL1YCR020W-B ATF2P53296 535 aa4.89□□□□□ -1.63
HTL1YCR020W-B HST3P53687 447 aa4.89□□□□□ -1.63
HTL1YCR020W-B YDR444WQ04093 687 aa4.89□□□□□ -1.63
HTL1YCR020W-B LCB5Q06147 687 aaKnown RBP4.88□□□□□ -1.63
HTL1YCR020W-B HXT10P43581 546 aa4.87□□□□□ -1.63
HTL1YCR020W-B TBF1Q02457 562 aa4.87□□□□□ -1.63
HTL1YCR020W-B TPD3P31383 635 aa4.86□□□□□ -1.63
HTL1YCR020W-B PDC1P06169 563 aaKnown RBP4.85□□□□□ -1.63
HTL1YCR020W-B RRD1P40454 393 aaKnown RBP4.85□□□□□ -1.63
HTL1YCR020W-B YJR115WP47152 169 aa4.85□□□□□ -1.63
HTL1YCR020W-B PUS6P53294 404 aa4.85□□□□□ -1.63
HTL1YCR020W-B SYH1Q02875 849 aaKnown RBP4.84□□□□□ -1.63
HTL1YCR020W-B MMP1Q12372 583 aa4.84□□□□□ -1.63
HTL1YCR020W-B YDL206WQ12424 762 aa4.84□□□□□ -1.63
HTL1YCR020W-B KIP2P28743 706 aa4.83□□□□□ -1.64
HTL1YCR020W-B GLC3P32775 704 aa4.83□□□□□ -1.64
HTL1YCR020W-B ALR1Q08269 859 aa4.83□□□□□ -1.64
HTL1YCR020W-B TRM1P15565 570 aaKnown RBP4.82□□□□□ -1.64
HTL1YCR020W-B HST2P53686 357 aa4.82□□□□□ -1.64
HTL1YCR020W-B ESS1P22696 170 aa4.81□□□□□ -1.64
HTL1YCR020W-B GLN1P32288 370 aaKnown RBP4.81□□□□□ -1.64
HTL1YCR020W-B RPA14P50106 137 aa4.81□□□□□ -1.64
HTL1YCR020W-B TYW1Q08960 810 aaKnown RBP4.81□□□□□ -1.64
HTL1YCR020W-B IXR1P33417 597 aa4.8□□□□□ -1.64
HTL1YCR020W-B MSB3P48566 633 aaPredicted RBP4.8□□□□□ -1.64
HTL1YCR020W-B UGA3P26370 528 aa4.79□□□□□ -1.64
HTL1YCR020W-B YNR021WP53723 404 aaKnown RBP4.79□□□□□ -1.64
HTL1YCR020W-B YPR097WQ06839 1073 aa4.79□□□□□ -1.64
HTL1YCR020W-B YJU3P28321 313 aa4.78□□□□□ -1.64
HTL1YCR020W-B BUB1P41695 1021 aaKnown RBP RIP-Chip data4.78□□□□□ -1.64not detected
HTL1YCR020W-B SRF1Q12516 437 aa4.77□□□□□ -1.65
HTL1YCR020W-B ACO2P39533 789 aa4.75□□□□□ -1.65
HTL1YCR020W-B PTK2P47116 818 aaKnown RBP4.75□□□□□ -1.65
HTL1YCR020W-B PKH3Q03306 898 aaPredicted RBP4.75□□□□□ -1.65
HTL1YCR020W-B ARG8P18544 423 aa4.74□□□□□ -1.65
HTL1YCR020W-B MRT4P33201 236 aaKnown RBP4.74□□□□□ -1.65
HTL1YCR020W-B CAF120P53836 1060 aa4.74□□□□□ -1.65
HTL1YCR020W-B MTC5Q03897 1148 aa4.74□□□□□ -1.65
HTL1YCR020W-B ITT1Q04638 464 aa4.73□□□□□ -1.65
HTL1YCR020W-B OPT2Q06593 877 aa4.73□□□□□ -1.65
HTL1YCR020W-B KTR1P27810 393 aaKnown RBP4.72□□□□□ -1.65
HTL1YCR020W-B CSN12P47130 423 aa4.72□□□□□ -1.65
Retrieved 100 of 5,963 RNA–protein pairs in 23.2 ms