RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 CTTNBP2Q8WZ74 1663 aa14.19□□□□□ -0.14
VPS11-207ENST00000620429 PPP4R2Q9NY27 417 aa14.18□□□□□ -0.14
VPS11-207ENST00000620429 KIAA0586Q9BVV6 1533 aa14.18□□□□□ -0.14
VPS11-207ENST00000620429 DIP2BQ9P265 1576 aa14.17□□□□□ -0.14
VPS11-207ENST00000620429 MAP3K1Q13233 1512 aa14.17□□□□□ -0.14
VPS11-207ENST00000620429 IPO9Q96P70 1041 aaKnown RBP14.17□□□□□ -0.14
VPS11-207ENST00000620429 EFCAB5A4FU69 1503 aa14.16□□□□□ -0.14
VPS11-207ENST00000620429 TRIM52Q96A61 297 aa14.15□□□□□ -0.14
VPS11-207ENST00000620429 FAM50AQ14320 339 aaKnown RBP14.15□□□□□ -0.14
VPS11-207ENST00000620429 JPH4Q96JJ6 628 aa14.15□□□□□ -0.14
VPS11-207ENST00000620429 ZMYND15Q9H091 742 aa14.15□□□□□ -0.14
VPS11-207ENST00000620429 CASKIN1Q8WXD9 1431 aa14.14□□□□□ -0.15
VPS11-207ENST00000620429 SIN3AQ96ST3 1273 aa14.14□□□□□ -0.15
VPS11-207ENST00000620429 ADCY10Q96PN6 1610 aa14.13□□□□□ -0.15
VPS11-207ENST00000620429 FYCO1Q9BQS8 1478 aa14.13□□□□□ -0.15
VPS11-207ENST00000620429 CFAP43Q8NDM7 1665 aa14.13□□□□□ -0.15
VPS11-207ENST00000620429 ZBTB47Q9UFB7 747 aaPredicted RBP14.12□□□□□ -0.15
VPS11-207ENST00000620429 SETD5Q9C0A6 1442 aa14.12□□□□□ -0.15
VPS11-207ENST00000620429 PPP1R15AO75807 674 aaPredicted RBP14.11□□□□□ -0.15
VPS11-207ENST00000620429 ANP32AP39687 249 aaKnown RBP14.11□□□□□ -0.15
VPS11-207ENST00000620429 GLI2P10070 1586 aa14.11□□□□□ -0.15
VPS11-207ENST00000620429 NPM1P06748 294 aaKnown RBP eCLIP14.11□□□□□ -0.15
VPS11-207ENST00000620429 HIRIP3Q9BW71 556 aaPredicted RBP14.1□□□□□ -0.15
VPS11-207ENST00000620429 FMN1Q68DA7 1419 aa14.1□□□□□ -0.15
VPS11-207ENST00000620429 SAMD9Q5K651 1589 aa14.09□□□□□ -0.15
VPS11-207ENST00000620429 ANP32CO43423 234 aa14.08□□□□□ -0.15
VPS11-207ENST00000620429 UHRF1BP1LA0JNW5 1464 aa14.08□□□□□ -0.16
VPS11-207ENST00000620429 KDM6BO15054 1643 aa14.08□□□□□ -0.16
VPS11-207ENST00000620429 BRPF3Q9ULD4 1205 aa14.06□□□□□ -0.16
VPS11-207ENST00000620429 TIMELESSQ9UNS1 1208 aa14.06□□□□□ -0.16
VPS11-207ENST00000620429 VSIG10Q8N0Z9 540 aa14.06□□□□□ -0.16
VPS11-207ENST00000620429 IRX6P78412 446 aaPredicted RBP14.05□□□□□ -0.16
VPS11-207ENST00000620429 ARID3CA6NKF2 412 aa14.04□□□□□ -0.16
VPS11-207ENST00000620429 MTUS2Q5JR59 1369 aa14.04□□□□□ -0.16
VPS11-207ENST00000620429 CARMIL2Q6F5E8 1435 aa14.04□□□□□ -0.16
VPS11-207ENST00000620429 PLB1Q6P1J6 1458 aa14.03□□□□□ -0.16
VPS11-207ENST00000620429 LRRIQ1Q96JM4 1722 aa14.03□□□□□ -0.16
VPS11-207ENST00000620429 FAM43AQ8N2R8 423 aa14.02□□□□□ -0.16
VPS11-207ENST00000620429 ABCC2Q92887 1545 aa14.02□□□□□ -0.17
VPS11-207ENST00000620429 NEFMP07197 916 aa14.01□□□□□ -0.17
VPS11-207ENST00000620429 IQGAP2Q13576 1575 aa14□□□□□ -0.17
VPS11-207ENST00000620429 FAM69CQ0P6D2 419 aa14□□□□□ -0.17
VPS11-207ENST00000620429 FGD6Q6ZV73 1430 aa13.99□□□□□ -0.17
VPS11-207ENST00000620429 PPM1GO15355 546 aaPredicted RBP13.98□□□□□ -0.17
VPS11-207ENST00000620429 MAGI3Q5TCQ9 1506 aa13.97□□□□□ -0.17
VPS11-207ENST00000620429 GSE1Q14687 1217 aa13.97□□□□□ -0.17
VPS11-207ENST00000620429 PTPRGP23470 1445 aa13.97□□□□□ -0.17
VPS11-207ENST00000620429 B4GALNT3Q6L9W6 998 aa13.97□□□□□ -0.17
VPS11-207ENST00000620429 NCOA2Q15596 1464 aa13.97□□□□□ -0.17
VPS11-207ENST00000620429 UGGT2Q9NYU1 1516 aa13.96□□□□□ -0.17
VPS11-207ENST00000620429 PPRC1Q5VV67 1664 aaKnown RBP13.96□□□□□ -0.17
VPS11-207ENST00000620429 MAP3K4Q9Y6R4 1608 aa13.95□□□□□ -0.18
VPS11-207ENST00000620429 PTPRKQ15262 1439 aa13.95□□□□□ -0.18
VPS11-207ENST00000620429 TEX14Q8IWB6 1497 aa13.95□□□□□ -0.18
VPS11-207ENST00000620429 KDM5BQ9UGL1 1544 aa13.94□□□□□ -0.18
VPS11-207ENST00000620429 CDK13Q14004 1512 aaKnown RBP13.93□□□□□ -0.18
VPS11-207ENST00000620429 TONSLQ96HA7 1378 aa13.93□□□□□ -0.18
VPS11-207ENST00000620429 HNRNPUQ00839 825 aaKnown RBP eCLIP13.92□□□□□ -0.18
VPS11-207ENST00000620429 MYOM3Q5VTT5 1437 aa13.92□□□□□ -0.18
VPS11-207ENST00000620429 UACAQ9BZF9 1416 aa13.92□□□□□ -0.18
VPS11-207ENST00000620429 TSPOAP1O95153 1857 aa13.91□□□□□ -0.18
VPS11-207ENST00000620429 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.91□□□□□ -0.18
VPS11-207ENST00000620429 EPRSP07814 1512 aaKnown RBP13.91□□□□□ -0.18
VPS11-207ENST00000620429 EHBP1L1Q8N3D4 1523 aa13.9□□□□□ -0.18
VPS11-207ENST00000620429 DISP1Q96F81 1524 aa13.9□□□□□ -0.18
VPS11-207ENST00000620429 RRP9O43818 475 aaKnown RBP13.9□□□□□ -0.18
VPS11-207ENST00000620429 ASXL2Q76L83 1435 aa13.89□□□□□ -0.19
VPS11-207ENST00000620429 HECW1Q76N89 1606 aa13.88□□□□□ -0.19
VPS11-207ENST00000620429 SUPT6HQ7KZ85 1726 aaKnown RBP13.88□□□□□ -0.19
VPS11-207ENST00000620429 CCDC18Q5T9S5 1454 aa13.88□□□□□ -0.19
VPS11-207ENST00000620429 KIAA0556O60303 1618 aa13.87□□□□□ -0.19
VPS11-207ENST00000620429 CHIC2Q9UKJ5 165 aa13.87□□□□□ -0.19
VPS11-207ENST00000620429 LAS1LQ9Y4W2 734 aaKnown RBP13.87□□□□□ -0.19
VPS11-207ENST00000620429 ZCCHC11Q5TAX3 1644 aaKnown RBP13.86□□□□□ -0.19
VPS11-207ENST00000620429 FGD1P98174 961 aa13.85□□□□□ -0.19
VPS11-207ENST00000620429 AAMPQ13685 434 aa13.85□□□□□ -0.19
VPS11-207ENST00000620429 HSP90AA2PQ14568 343 aaPredicted RBP13.85□□□□□ -0.19
VPS11-207ENST00000620429 RRP7BPQ9NSQ0 103 aa13.84□□□□□ -0.19
VPS11-207ENST00000620429 PTPN23Q9H3S7 1636 aa13.84□□□□□ -0.19
VPS11-207ENST00000620429 FRAT1Q92837 279 aaPredicted RBP13.83□□□□□ -0.2
VPS11-207ENST00000620429 HFM1A2PYH4 1435 aa13.83□□□□□ -0.2
VPS11-207ENST00000620429 NAIPQ13075 1403 aa13.83□□□□□ -0.2
VPS11-207ENST00000620429 KDM4FA0A1W2PPD8 638 aa13.83□□□□□ -0.2
VPS11-207ENST00000620429 RBM10P98175 930 aaKnown RBP13.83□□□□□ -0.2
VPS11-207ENST00000620429 NUP153P49790 1475 aaKnown RBP13.82□□□□□ -0.2
VPS11-207ENST00000620429 WDR7Q9Y4E6 1490 aa13.8□□□□□ -0.2
VPS11-207ENST00000620429 ADGRL1O94910 1474 aa13.79□□□□□ -0.2
VPS11-207ENST00000620429 ZNF644Q9H582 1327 aaPredicted RBP13.79□□□□□ -0.2
VPS11-207ENST00000620429 PDE4CQ08493 712 aa13.78□□□□□ -0.2
VPS11-207ENST00000620429 ABCA8O94911 1581 aa13.78□□□□□ -0.2
VPS11-207ENST00000620429 TCOF1Q13428 1488 aaKnown RBP13.78□□□□□ -0.2
VPS11-207ENST00000620429 RAPGEF6Q8TEU7 1601 aa13.77□□□□□ -0.21
VPS11-207ENST00000620429 A0A0U1RQG5 324 aaPredicted RBP13.76□□□□□ -0.21
VPS11-207ENST00000620429 NFKBIBQ15653 356 aa13.76□□□□□ -0.21
VPS11-207ENST00000620429 HSPA5P11021 654 aaKnown RBP13.76□□□□□ -0.21
VPS11-207ENST00000620429 HSP90AA1P07900 732 aaKnown RBP13.75□□□□□ -0.21
VPS11-207ENST00000620429 DCAF11Q8TEB1 546 aa13.75□□□□□ -0.21
VPS11-207ENST00000620429 ZBED9Q6R2W3 1325 aa13.74□□□□□ -0.21
VPS11-207ENST00000620429 MIA2Q96PC5 1412 aa13.73□□□□□ -0.21
VPS11-207ENST00000620429 CCDC184Q52MB2 194 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms