RNA–Protein interactions for RNA: ENST00000525975.5

HIPK3-204, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-204ENST00000525975 TOP2BQ02880 1626 aa6.23□□□□□ -1.41
HIPK3-204ENST00000525975 CCDC7Q96M83 1385 aa6.23□□□□□ -1.41
HIPK3-204ENST00000525975 MS4A1P11836 297 aa6.23□□□□□ -1.41
HIPK3-204ENST00000525975 UACAQ9BZF9 1416 aa6.22□□□□□ -1.41
HIPK3-204ENST00000525975 BIVM-ERCC5R4GMW8 1640 aa6.22□□□□□ -1.41
HIPK3-204ENST00000525975 EXOC6Q8TAG9 804 aa6.22□□□□□ -1.41
HIPK3-204ENST00000525975 TMC1Q8TDI8 760 aa6.22□□□□□ -1.41
HIPK3-204ENST00000525975 SLC4A3P48751 1232 aa6.22□□□□□ -1.41
HIPK3-204ENST00000525975 CFTRP13569 1480 aa6.21□□□□□ -1.41
HIPK3-204ENST00000525975 MAP3K1Q13233 1512 aa6.21□□□□□ -1.41
HIPK3-204ENST00000525975 NCOA2Q15596 1464 aa6.21□□□□□ -1.42
HIPK3-204ENST00000525975 RRP1P56182 461 aaKnown RBP6.21□□□□□ -1.42
HIPK3-204ENST00000525975 PIAS4Q8N2W9 510 aaPredicted RBP6.21□□□□□ -1.42
HIPK3-204ENST00000525975 RNF123Q5XPI4 1314 aa6.21□□□□□ -1.42
HIPK3-204ENST00000525975 NAP1L5Q96NT1 182 aaPredicted RBP6.2□□□□□ -1.42
HIPK3-204ENST00000525975 CNKSR2Q8WXI2 1034 aa6.2□□□□□ -1.42
HIPK3-204ENST00000525975 RCAN3Q9UKA8 241 aa6.19□□□□□ -1.42
HIPK3-204ENST00000525975 FMN1Q68DA7 1419 aa6.19□□□□□ -1.42
HIPK3-204ENST00000525975 CUX1P39880 1505 aa6.18□□□□□ -1.42
HIPK3-204ENST00000525975 NCOA1Q15788 1441 aa6.18□□□□□ -1.42
HIPK3-204ENST00000525975 KIF7Q2M1P5 1343 aa6.18□□□□□ -1.42
HIPK3-204ENST00000525975 FRAT2O75474 233 aaPredicted RBP6.18□□□□□ -1.42
HIPK3-204ENST00000525975 TPRNQ4KMQ1 711 aa6.18□□□□□ -1.42
HIPK3-204ENST00000525975 L3MBTL2Q969R5 705 aa6.18□□□□□ -1.42
HIPK3-204ENST00000525975 RRP7BPQ9NSQ0 103 aa6.18□□□□□ -1.42
HIPK3-204ENST00000525975 HFM1A2PYH4 1435 aa6.18□□□□□ -1.42
HIPK3-204ENST00000525975 MTUS2Q5JR59 1369 aa6.18□□□□□ -1.42
HIPK3-204ENST00000525975 ZMYND15Q9H091 742 aa6.18□□□□□ -1.42
HIPK3-204ENST00000525975 HSP90AA2PQ14568 343 aaPredicted RBP6.17□□□□□ -1.42
HIPK3-204ENST00000525975 CHIC2Q9UKJ5 165 aa6.17□□□□□ -1.42
HIPK3-204ENST00000525975 FGD6Q6ZV73 1430 aa6.17□□□□□ -1.42
HIPK3-204ENST00000525975 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.17□□□□□ -1.425e-8■□□□□ 8.8
HIPK3-204ENST00000525975 HSP90AA1P07900 732 aaKnown RBP6.17□□□□□ -1.42
HIPK3-204ENST00000525975 ATXN8OSP0DMR3 200 aa6.17□□□□□ -1.42
HIPK3-204ENST00000525975 PNNQ9H307 717 aaKnown RBP6.17□□□□□ -1.42
HIPK3-204ENST00000525975 ZNF326Q5BKZ1 582 aaKnown RBP6.16□□□□□ -1.42
HIPK3-204ENST00000525975 L1TD1Q5T7N2 865 aaKnown RBP6.16□□□□□ -1.42
HIPK3-204ENST00000525975 KDM2AQ9Y2K7 1162 aa6.15□□□□□ -1.42
HIPK3-204ENST00000525975 DCAF11Q8TEB1 546 aa6.15□□□□□ -1.42
HIPK3-204ENST00000525975 CADPSQ9ULU8 1353 aa6.15□□□□□ -1.42
HIPK3-204ENST00000525975 PTPN23Q9H3S7 1636 aa6.15□□□□□ -1.43
HIPK3-204ENST00000525975 SKAP1Q86WV1 359 aa6.15□□□□□ -1.43
HIPK3-204ENST00000525975 NAIPQ13075 1403 aa6.15□□□□□ -1.43
HIPK3-204ENST00000525975 PCF11O94913 1555 aaKnown RBP6.15□□□□□ -1.43
HIPK3-204ENST00000525975 CARMIL1Q5VZK9 1371 aa6.14□□□□□ -1.43
HIPK3-204ENST00000525975 PNISRQ8TF01 805 aaKnown RBP6.14□□□□□ -1.43
HIPK3-204ENST00000525975 FHOD3Q2V2M9 1422 aa6.14□□□□□ -1.43
HIPK3-204ENST00000525975 AQRO60306 1485 aaKnown RBP eCLIP6.14□□□□□ -1.432e-6■■■■□ 25.3
HIPK3-204ENST00000525975 CFAP43Q8NDM7 1665 aa6.13□□□□□ -1.43
HIPK3-204ENST00000525975 PLIN1O60240 522 aa6.13□□□□□ -1.43
HIPK3-204ENST00000525975 KDM5BQ9UGL1 1544 aa6.13□□□□□ -1.43
HIPK3-204ENST00000525975 FAM161AQ3B820 660 aa6.13□□□□□ -1.43
HIPK3-204ENST00000525975 MPHOSPH9Q99550 1183 aa6.13□□□□□ -1.43
HIPK3-204ENST00000525975 NESP48681 1621 aa6.13□□□□□ -1.43
HIPK3-204ENST00000525975 RRP9O43818 475 aaKnown RBP6.13□□□□□ -1.43
HIPK3-204ENST00000525975 RGS3P49796 1198 aa6.13□□□□□ -1.43
HIPK3-204ENST00000525975 CRBNQ96SW2 442 aa6.13□□□□□ -1.43
HIPK3-204ENST00000525975 RRAGDQ9NQL2 400 aaPredicted RBP6.13□□□□□ -1.43
HIPK3-204ENST00000525975 HAP1P54257 671 aaPredicted RBP6.12□□□□□ -1.43
HIPK3-204ENST00000525975 PODXL2Q9NZ53 605 aa6.12□□□□□ -1.43
HIPK3-204ENST00000525975 PTPRKQ15262 1439 aa6.12□□□□□ -1.43
HIPK3-204ENST00000525975 PDE3BQ13370 1112 aa6.12□□□□□ -1.43
HIPK3-204ENST00000525975 NBPF8Q3BBV2 869 aa6.12□□□□□ -1.43
HIPK3-204ENST00000525975 POGKQ9P215 609 aa6.12□□□□□ -1.43
HIPK3-204ENST00000525975 BECN1Q14457 450 aa6.12□□□□□ -1.43
HIPK3-204ENST00000525975 FYCO1Q9BQS8 1478 aa6.11□□□□□ -1.43
HIPK3-204ENST00000525975 TULP1O00294 542 aaPredicted RBP6.11□□□□□ -1.43
HIPK3-204ENST00000525975 IGF1RP08069 1367 aa6.11□□□□□ -1.43
HIPK3-204ENST00000525975 SLKQ9H2G2 1235 aaPredicted RBP6.11□□□□□ -1.43
HIPK3-204ENST00000525975 KTN1Q86UP2 1357 aaKnown RBP6.11□□□□□ -1.43
HIPK3-204ENST00000525975 LAMC3Q9Y6N6 1575 aa6.1□□□□□ -1.43
HIPK3-204ENST00000525975 FANCD2Q9BXW9 1451 aa6.1□□□□□ -1.43
HIPK3-204ENST00000525975 CENPQQ7L2Z9 268 aaPredicted RBP6.1□□□□□ -1.43
HIPK3-204ENST00000525975 CASKIN1Q8WXD9 1431 aa6.1□□□□□ -1.43
HIPK3-204ENST00000525975 DHX29Q7Z478 1369 aaKnown RBP6.1□□□□□ -1.43
HIPK3-204ENST00000525975 GOLGA6L3A6NEY3 463 aa6.1□□□□□ -1.43
HIPK3-204ENST00000525975 ARID4BQ4LE39 1312 aaPredicted RBP6.1□□□□□ -1.43
HIPK3-204ENST00000525975 MYBBP1AQ9BQG0 1328 aaKnown RBP6.1□□□□□ -1.43
HIPK3-204ENST00000525975 MYOM3Q5VTT5 1437 aa6.09□□□□□ -1.43
HIPK3-204ENST00000525975 KIF15Q9NS87 1388 aa6.09□□□□□ -1.43
HIPK3-204ENST00000525975 BRD4O60885 1362 aaPredicted RBP6.09□□□□□ -1.43
HIPK3-204ENST00000525975 USP47Q96K76 1375 aa6.09□□□□□ -1.43
HIPK3-204ENST00000525975 CDCA7LQ96GN5 454 aa6.09□□□□□ -1.43
HIPK3-204ENST00000525975 KIF21AQ7Z4S6 1674 aa6.09□□□□□ -1.43
HIPK3-204ENST00000525975 ROCK2O75116 1388 aaKnown RBP6.09□□□□□ -1.44
HIPK3-204ENST00000525975 RALBP1Q15311 655 aa6.09□□□□□ -1.44
HIPK3-204ENST00000525975 FGD5Q6ZNL6 1462 aa6.08□□□□□ -1.44
HIPK3-204ENST00000525975 GZF1Q9H116 711 aaPredicted RBP6.08□□□□□ -1.44
HIPK3-204ENST00000525975 DNMBPQ6XZF7 1577 aa6.08□□□□□ -1.44
HIPK3-204ENST00000525975 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.08□□□□□ -1.44
HIPK3-204ENST00000525975 MIA2Q96PC5 1412 aa6.08□□□□□ -1.44
HIPK3-204ENST00000525975 TRIM44Q96DX7 344 aaPredicted RBP6.07□□□□□ -1.44
HIPK3-204ENST00000525975 CLCN1P35523 988 aa6.07□□□□□ -1.44
HIPK3-204ENST00000525975 C8orf34Q49A92 452 aa6.07□□□□□ -1.44
HIPK3-204ENST00000525975 NLRP13Q86W25 1043 aa6.07□□□□□ -1.44
HIPK3-204ENST00000525975 UPF2Q9HAU5 1272 aaKnown RBP6.07□□□□□ -1.44
HIPK3-204ENST00000525975 ABCA5Q8WWZ7 1642 aa6.06□□□□□ -1.44
HIPK3-204ENST00000525975 SPATA31E1Q6ZUB1 1445 aa6.06□□□□□ -1.44
HIPK3-204ENST00000525975 HECW1Q76N89 1606 aa6.06□□□□□ -1.44
HIPK3-204ENST00000525975 LRPPRCP42704 1394 aaKnown RBP6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms