RNA–Protein interactions for RNA: ENST00000525975.5

HIPK3-204, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-204ENST00000525975 CHIC1Q5VXU3 224 aa8.73□□□□□ -1.01
HIPK3-204ENST00000525975 AEBP2Q6ZN18 517 aaPredicted RBP8.59□□□□□ -1.03
HIPK3-204ENST00000525975 NISCHQ9Y2I1 1504 aa8.53□□□□□ -1.04
HIPK3-204ENST00000525975 HRCP23327 699 aa7.92□□□□□ -1.14
HIPK3-204ENST00000525975 PELP1Q8IZL8 1130 aaKnown RBP7.86□□□□□ -1.15
HIPK3-204ENST00000525975 PHF23Q9BUL5 403 aaPredicted RBP7.84□□□□□ -1.15
HIPK3-204ENST00000525975 PCGF6Q9BYE7 350 aa7.76□□□□□ -1.17
HIPK3-204ENST00000525975 PPARGC1BQ86YN6 1023 aaKnown RBP7.75□□□□□ -1.17
HIPK3-204ENST00000525975 SUPT5HO00267 1087 aaKnown RBP7.72□□□□□ -1.17
HIPK3-204ENST00000525975 SHROOM4Q9ULL8 1493 aa7.68□□□□□ -1.18
HIPK3-204ENST00000525975 MYT1Q01538 1121 aa7.61□□□□□ -1.19
HIPK3-204ENST00000525975 MYO15BQ96JP2 1530 aa7.54□□□□□ -1.2
HIPK3-204ENST00000525975 SCAF1Q9H7N4 1312 aaKnown RBP7.52□□□□□ -1.2
HIPK3-204ENST00000525975 ZEB1P37275 1124 aaPredicted RBP7.48□□□□□ -1.21
HIPK3-204ENST00000525975 TRIM26Q12899 539 aaPredicted RBP7.47□□□□□ -1.21
HIPK3-204ENST00000525975 DCAF1Q9Y4B6 1507 aa7.45□□□□□ -1.22
HIPK3-204ENST00000525975 SLC24A1O60721 1099 aa7.45□□□□□ -1.22
HIPK3-204ENST00000525975 CCDC180Q9P1Z9 1646 aa7.42□□□□□ -1.22
HIPK3-204ENST00000525975 LOC105371045A0A1W2PR82 267 aa7.39□□□□□ -1.23
HIPK3-204ENST00000525975 ACIN1Q9UKV3 1341 aaKnown RBP7.35□□□□□ -1.23
HIPK3-204ENST00000525975 CENPBP07199 599 aaPredicted RBP7.34□□□□□ -1.23
HIPK3-204ENST00000525975 EHMT2Q96KQ7 1210 aa7.32□□□□□ -1.24
HIPK3-204ENST00000525975 GTF3C3Q9Y5Q9 886 aa7.32□□□□□ -1.24
HIPK3-204ENST00000525975 NEUROD1Q13562 356 aa7.31□□□□□ -1.24
HIPK3-204ENST00000525975 PLPPR3Q6T4P5 718 aa7.28□□□□□ -1.24
HIPK3-204ENST00000525975 DCAF8L2P0C7V8 631 aa7.23□□□□□ -1.25
HIPK3-204ENST00000525975 DIEXFQ68CQ4 756 aaKnown RBP7.21□□□□□ -1.26
HIPK3-204ENST00000525975 CCER1Q8TC90 406 aaPredicted RBP7.2□□□□□ -1.26
HIPK3-204ENST00000525975 ZCCHC6Q5VYS8 1495 aaKnown RBP7.2□□□□□ -1.26
HIPK3-204ENST00000525975 CSRNP3Q8WYN3 585 aa7.18□□□□□ -1.26
HIPK3-204ENST00000525975 KCNA4P22459 653 aa7.16□□□□□ -1.26
HIPK3-204ENST00000525975 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.16□□□□□ -1.26
HIPK3-204ENST00000525975 FAM9AQ8IZU1 332 aaPredicted RBP7.16□□□□□ -1.26
HIPK3-204ENST00000525975 YTHDC1Q96MU7 727 aaKnown RBP7.15□□□□□ -1.26
HIPK3-204ENST00000525975 TTBK1Q5TCY1 1321 aaPredicted RBP7.13□□□□□ -1.27
HIPK3-204ENST00000525975 TRIM41Q8WV44 630 aa7.12□□□□□ -1.27
HIPK3-204ENST00000525975 SENP3Q9H4L4 574 aaPredicted RBP7.05□□□□□ -1.28
HIPK3-204ENST00000525975 BCL11AQ9H165 835 aa7.04□□□□□ -1.28
HIPK3-204ENST00000525975 ZNF316A6NFI3 1004 aaPredicted RBP7.03□□□□□ -1.28
HIPK3-204ENST00000525975 RTN4Q9NQC3 1192 aaKnown RBP7□□□□□ -1.29
HIPK3-204ENST00000525975 ANP32EQ9BTT0 268 aa6.99□□□□□ -1.29
HIPK3-204ENST00000525975 MIER1Q8N108 512 aa6.98□□□□□ -1.29
HIPK3-204ENST00000525975 CLSPNQ9HAW4 1339 aa6.94□□□□□ -1.3
HIPK3-204ENST00000525975 AMER1Q5JTC6 1135 aaPredicted RBP6.94□□□□□ -1.3
HIPK3-204ENST00000525975 ABCC9O60706 1549 aa6.92□□□□□ -1.3
HIPK3-204ENST00000525975 SUPT16HQ9Y5B9 1047 aaKnown RBP6.91□□□□□ -1.3
HIPK3-204ENST00000525975 TSHZ2Q9NRE2 1034 aa6.9□□□□□ -1.31
HIPK3-204ENST00000525975 ADRA2BP18089 450 aa6.87□□□□□ -1.31
HIPK3-204ENST00000525975 NACADO15069 1562 aa6.85□□□□□ -1.31
HIPK3-204ENST00000525975 SCRIBQ14160 1630 aa6.85□□□□□ -1.31
HIPK3-204ENST00000525975 RSF1Q96T23 1441 aaPredicted RBP6.84□□□□□ -1.31
HIPK3-204ENST00000525975 HNRNPUL2Q1KMD3 747 aaKnown RBP6.84□□□□□ -1.31
HIPK3-204ENST00000525975 SLC4A1APQ9BWU0 796 aaKnown RBP6.84□□□□□ -1.31
HIPK3-204ENST00000525975 BCANQ96GW7 911 aa6.83□□□□□ -1.32
HIPK3-204ENST00000525975 RB1CC1Q8TDY2 1594 aa6.83□□□□□ -1.32
HIPK3-204ENST00000525975 ERICH6Q7L0X2 663 aa6.81□□□□□ -1.32
HIPK3-204ENST00000525975 NEFLP07196 543 aa6.79□□□□□ -1.32
HIPK3-204ENST00000525975 PRKCSHP14314 528 aaPredicted RBP6.79□□□□□ -1.32
HIPK3-204ENST00000525975 UBTFP17480 764 aaKnown RBP6.78□□□□□ -1.32
HIPK3-204ENST00000525975 WRNQ14191 1432 aaPredicted RBP eCLIP6.78□□□□□ -1.32
HIPK3-204ENST00000525975 CEP162Q5TB80 1403 aa6.78□□□□□ -1.32
HIPK3-204ENST00000525975 FKBP8Q14318 412 aa6.77□□□□□ -1.33
HIPK3-204ENST00000525975 NCBP3Q53F19 620 aaKnown RBP6.76□□□□□ -1.33
HIPK3-204ENST00000525975 RBM19Q9Y4C8 960 aaKnown RBP6.75□□□□□ -1.33
HIPK3-204ENST00000525975 UNC13AQ9UPW8 1703 aa6.75□□□□□ -1.33
HIPK3-204ENST00000525975 APLP2Q06481 763 aa6.75□□□□□ -1.33
HIPK3-204ENST00000525975 ZBTB22O15209 634 aa6.74□□□□□ -1.33
HIPK3-204ENST00000525975 TNIKQ9UKE5 1360 aa6.71□□□□□ -1.34
HIPK3-204ENST00000525975 ITGAEP38570 1179 aa6.7□□□□□ -1.34
HIPK3-204ENST00000525975 MYT1LQ9UL68 1186 aa6.68□□□□□ -1.34
HIPK3-204ENST00000525975 KCNH8Q96L42 1107 aa6.66□□□□□ -1.34
HIPK3-204ENST00000525975 CDK11AQ9UQ88 783 aaPredicted RBP6.66□□□□□ -1.34
HIPK3-204ENST00000525975 CECR2Q9BXF3 1484 aa6.65□□□□□ -1.35
HIPK3-204ENST00000525975 MSH5O43196 834 aa6.64□□□□□ -1.35
HIPK3-204ENST00000525975 DEKP35659 375 aaKnown RBP6.64□□□□□ -1.35
HIPK3-204ENST00000525975 RANGAP1P46060 587 aaPredicted RBP6.64□□□□□ -1.35
HIPK3-204ENST00000525975 FOXD1Q16676 465 aa6.64□□□□□ -1.35
HIPK3-204ENST00000525975 PPP6R1Q9UPN7 881 aa6.64□□□□□ -1.35
HIPK3-204ENST00000525975 BICRAQ9NZM4 1560 aa6.63□□□□□ -1.35
HIPK3-204ENST00000525975 CCDC88BA6NC98 1476 aa6.63□□□□□ -1.35
HIPK3-204ENST00000525975 GOLGA3Q08378 1498 aa6.63□□□□□ -1.35
HIPK3-204ENST00000525975 SOGA1O94964 1423 aa6.63□□□□□ -1.35
HIPK3-204ENST00000525975 TRIM52Q96A61 297 aa6.63□□□□□ -1.35
HIPK3-204ENST00000525975 EEA1Q15075 1411 aa6.62□□□□□ -1.35
HIPK3-204ENST00000525975 FANCIQ9NVI1 1328 aa6.62□□□□□ -1.35
HIPK3-204ENST00000525975 MROH2BQ7Z745 1585 aa6.62□□□□□ -1.35
HIPK3-204ENST00000525975 ABCC8Q09428 1581 aa6.62□□□□□ -1.35
HIPK3-204ENST00000525975 DHX57Q6P158 1386 aaKnown RBP6.61□□□□□ -1.35
HIPK3-204ENST00000525975 DDX10Q13206 875 aaKnown RBP6.61□□□□□ -1.35
HIPK3-204ENST00000525975 CLIP1P30622 1438 aa6.6□□□□□ -1.35
HIPK3-204ENST00000525975 WIZO95785 1651 aa6.59□□□□□ -1.35
HIPK3-204ENST00000525975 ANP32CO43423 234 aa6.58□□□□□ -1.36
HIPK3-204ENST00000525975 NBR1Q14596 966 aa6.58□□□□□ -1.36
HIPK3-204ENST00000525975 ANO8Q9HCE9 1232 aaPredicted RBP6.58□□□□□ -1.36
HIPK3-204ENST00000525975 RTL5Q5HYW3 569 aaPredicted RBP6.57□□□□□ -1.36
HIPK3-204ENST00000525975 VPS8Q8N3P4 1428 aa6.57□□□□□ -1.36
HIPK3-204ENST00000525975 IRX6P78412 446 aaPredicted RBP6.57□□□□□ -1.36
HIPK3-204ENST00000525975 BAZ1AQ9NRL2 1556 aaPredicted RBP6.57□□□□□ -1.36
HIPK3-204ENST00000525975 SMARCA4P51532 1647 aa6.56□□□□□ -1.36
HIPK3-204ENST00000525975 RUSC2Q8N2Y8 1516 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms