RNA–Protein interactions for RNA: ENST00000517790.1

PVT1-205, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 599 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-205ENST00000517790 CERKQ8TCT0 537 aa8.73□□□□□ -1.01
PVT1-205ENST00000517790 MAGI3Q5TCQ9 1506 aa8.72□□□□□ -1.01
PVT1-205ENST00000517790 MADDQ8WXG6 1647 aa8.72□□□□□ -1.01
PVT1-205ENST00000517790 CFAP43Q8NDM7 1665 aa8.72□□□□□ -1.01
PVT1-205ENST00000517790 CFAP44Q96MT7 982 aa8.71□□□□□ -1.02
PVT1-205ENST00000517790 CARMIL1Q5VZK9 1371 aa8.71□□□□□ -1.02
PVT1-205ENST00000517790 KIF27Q86VH2 1401 aa8.71□□□□□ -1.02
PVT1-205ENST00000517790 BCORL1Q5H9F3 1711 aa8.69□□□□□ -1.02
PVT1-205ENST00000517790 RAPGEF3O95398 923 aa8.68□□□□□ -1.02
PVT1-205ENST00000517790 PIAS4Q8N2W9 510 aaPredicted RBP8.68□□□□□ -1.02
PVT1-205ENST00000517790 TSHZ2Q9NRE2 1034 aa8.68□□□□□ -1.02
PVT1-205ENST00000517790 SCAF1Q9H7N4 1312 aaKnown RBP8.68□□□□□ -1.02
PVT1-205ENST00000517790 SPATA31D1Q6ZQQ2 1576 aa8.68□□□□□ -1.02
PVT1-205ENST00000517790 RIMS1Q86UR5 1692 aaKnown RBP8.68□□□□□ -1.02
PVT1-205ENST00000517790 KIAA0556O60303 1618 aa8.67□□□□□ -1.02
PVT1-205ENST00000517790 MYCNP04198 464 aaPredicted RBP8.67□□□□□ -1.02
PVT1-205ENST00000517790 ARID4BQ4LE39 1312 aaPredicted RBP8.67□□□□□ -1.02
PVT1-205ENST00000517790 ARAP3Q8WWN8 1544 aa8.67□□□□□ -1.02
PVT1-205ENST00000517790 UGGT2Q9NYU1 1516 aa8.66□□□□□ -1.02
PVT1-205ENST00000517790 SLC4A2P04920 1241 aa8.66□□□□□ -1.02
PVT1-205ENST00000517790 ARID3CA6NKF2 412 aa8.65□□□□□ -1.02
PVT1-205ENST00000517790 FRMPD1Q5SYB0 1578 aa8.63□□□□□ -1.03
PVT1-205ENST00000517790 ABCA8O94911 1581 aa8.62□□□□□ -1.03
PVT1-205ENST00000517790 VASPP50552 380 aaPredicted RBP8.62□□□□□ -1.03
PVT1-205ENST00000517790 TRIM26Q12899 539 aaPredicted RBP8.62□□□□□ -1.03
PVT1-205ENST00000517790 SPRYD3Q8NCJ5 442 aa8.62□□□□□ -1.03
PVT1-205ENST00000517790 SIGLEC1Q9BZZ2 1709 aa8.6□□□□□ -1.03
PVT1-205ENST00000517790 IFNLR1Q8IU57 520 aaPredicted RBP8.6□□□□□ -1.03
PVT1-205ENST00000517790 ARHGEF40Q8TER5 1519 aa8.58□□□□□ -1.04
PVT1-205ENST00000517790 STRCQ7RTU9 1775 aa8.58□□□□□ -1.04
PVT1-205ENST00000517790 ABCA9Q8IUA7 1624 aa8.58□□□□□ -1.04
PVT1-205ENST00000517790 MLECQ14165 292 aa8.57□□□□□ -1.04
PVT1-205ENST00000517790 RNF216Q9NWF9 866 aaPredicted RBP8.57□□□□□ -1.04
PVT1-205ENST00000517790 RAPGEF2Q9Y4G8 1499 aa8.57□□□□□ -1.04
PVT1-205ENST00000517790 PHLDB1Q86UU1 1377 aa8.56□□□□□ -1.04
PVT1-205ENST00000517790 ATP10BO94823 1461 aa8.56□□□□□ -1.04
PVT1-205ENST00000517790 UBTFP17480 764 aaKnown RBP8.55□□□□□ -1.04
PVT1-205ENST00000517790 NEO1Q92859 1461 aa8.55□□□□□ -1.04
PVT1-205ENST00000517790 FER1L4A9Z1Z3 1794 aa8.55□□□□□ -1.04
PVT1-205ENST00000517790 RICTORQ6R327 1708 aa8.54□□□□□ -1.04
PVT1-205ENST00000517790 CTTNBP2Q8WZ74 1663 aa8.54□□□□□ -1.04
PVT1-205ENST00000517790 HRCP23327 699 aa8.54□□□□□ -1.04
PVT1-205ENST00000517790 CEBPAP49715 358 aaPredicted RBP8.54□□□□□ -1.04
PVT1-205ENST00000517790 YEATS2Q9ULM3 1422 aa8.54□□□□□ -1.04
PVT1-205ENST00000517790 P3H3Q8IVL6 736 aa8.53□□□□□ -1.04
PVT1-205ENST00000517790 PREX1Q8TCU6 1659 aa8.53□□□□□ -1.04
PVT1-205ENST00000517790 TTC37Q6PGP7 1564 aa8.52□□□□□ -1.04
PVT1-205ENST00000517790 GOLGA3Q08378 1498 aa8.52□□□□□ -1.05
PVT1-205ENST00000517790 FANCAO15360 1455 aa8.51□□□□□ -1.05
PVT1-205ENST00000517790 DENND4BO75064 1496 aaPredicted RBP8.51□□□□□ -1.05
PVT1-205ENST00000517790 POGZQ7Z3K3 1410 aa8.51□□□□□ -1.05
PVT1-205ENST00000517790 LTBP4Q8N2S1 1624 aa8.51□□□□□ -1.05
PVT1-205ENST00000517790 AKNAQ7Z591 1439 aa8.5□□□□□ -1.05
PVT1-205ENST00000517790 ZFYVE16Q7Z3T8 1539 aa8.49□□□□□ -1.05
PVT1-205ENST00000517790 DMRT2Q9Y5R5 561 aa8.49□□□□□ -1.05
PVT1-205ENST00000517790 FHOD3Q2V2M9 1422 aa8.48□□□□□ -1.05
PVT1-205ENST00000517790 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.48□□□□□ -1.05
PVT1-205ENST00000517790 HNRNPUL2Q1KMD3 747 aaKnown RBP8.48□□□□□ -1.05
PVT1-205ENST00000517790 ZMYM4Q5VZL5 1548 aa8.48□□□□□ -1.05
PVT1-205ENST00000517790 ARHGEF12Q9NZN5 1544 aa8.47□□□□□ -1.05
PVT1-205ENST00000517790 HECW1Q76N89 1606 aa8.47□□□□□ -1.05
PVT1-205ENST00000517790 EFCAB5A4FU69 1503 aa8.46□□□□□ -1.05
PVT1-205ENST00000517790 SETD1BQ9UPS6 1966 aaKnown RBP8.46□□□□□ -1.06
PVT1-205ENST00000517790 PTPRTO14522 1441 aa8.46□□□□□ -1.06
PVT1-205ENST00000517790 RAPGEF6Q8TEU7 1601 aa8.45□□□□□ -1.06
PVT1-205ENST00000517790 PROM2Q8N271 834 aa8.45□□□□□ -1.06
PVT1-205ENST00000517790 UHRF1BP1Q6BDS2 1440 aa8.45□□□□□ -1.06
PVT1-205ENST00000517790 UBAP1LF5GYI3 381 aa8.44□□□□□ -1.06
PVT1-205ENST00000517790 ECM2O94769 699 aaPredicted RBP8.44□□□□□ -1.06
PVT1-205ENST00000517790 NUP153P49790 1475 aaKnown RBP8.43□□□□□ -1.06
PVT1-205ENST00000517790 IQSEC2Q5JU85 1478 aa8.43□□□□□ -1.06
PVT1-205ENST00000517790 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.43□□□□□ -1.06
PVT1-205ENST00000517790 MED1Q15648 1581 aaPredicted RBP8.43□□□□□ -1.06
PVT1-205ENST00000517790 ZNF335Q9H4Z2 1342 aaPredicted RBP8.42□□□□□ -1.06
PVT1-205ENST00000517790 ATP10AO60312 1499 aa8.42□□□□□ -1.06
PVT1-205ENST00000517790 MAGI2Q86UL8 1455 aa8.42□□□□□ -1.06
PVT1-205ENST00000517790 CFAP74Q9C0B2 1584 aa8.42□□□□□ -1.06
PVT1-205ENST00000517790 C3P01024 1663 aa8.41□□□□□ -1.06
PVT1-205ENST00000517790 SCAPERQ9BY12 1400 aa8.41□□□□□ -1.06
PVT1-205ENST00000517790 NCOA1Q15788 1441 aa8.4□□□□□ -1.06
PVT1-205ENST00000517790 C9orf84Q5VXU9 1444 aa8.4□□□□□ -1.06
PVT1-205ENST00000517790 HSPA1LP34931 641 aa8.4□□□□□ -1.06
PVT1-205ENST00000517790 FAM9AQ8IZU1 332 aaPredicted RBP8.4□□□□□ -1.06
PVT1-205ENST00000517790 PLEKHD1A6NEE1 506 aa8.39□□□□□ -1.07
PVT1-205ENST00000517790 SAMD9Q5K651 1589 aa8.39□□□□□ -1.07
PVT1-205ENST00000517790 PRXQ9BXM0 1461 aa8.38□□□□□ -1.07
PVT1-205ENST00000517790 NCKAP5LQ9HCH0 1330 aa8.38□□□□□ -1.07
PVT1-205ENST00000517790 SPDYE4A6NLX3 237 aa8.37□□□□□ -1.07
PVT1-205ENST00000517790 ATF5Q9Y2D1 282 aaPredicted RBP8.37□□□□□ -1.07
PVT1-205ENST00000517790 CAMSAP1Q5T5Y3 1602 aa8.36□□□□□ -1.07
PVT1-205ENST00000517790 BRPF1P55201 1214 aaPredicted RBP8.36□□□□□ -1.07
PVT1-205ENST00000517790 PIP4K2BP78356 416 aa8.36□□□□□ -1.07
PVT1-205ENST00000517790 TRAPPC8Q9Y2L5 1435 aa8.36□□□□□ -1.07
PVT1-205ENST00000517790 AFAP1Q8N556 730 aa8.35□□□□□ -1.07
PVT1-205ENST00000517790 RGL2O15211 777 aa8.34□□□□□ -1.07
PVT1-205ENST00000517790 PLCH2O75038 1416 aa8.34□□□□□ -1.07
PVT1-205ENST00000517790 DIP2CQ9Y2E4 1556 aa8.34□□□□□ -1.07
PVT1-205ENST00000517790 CDK13Q14004 1512 aaKnown RBP8.34□□□□□ -1.08
PVT1-205ENST00000517790 MYT1LQ9UL68 1186 aa8.33□□□□□ -1.08
PVT1-205ENST00000517790 ABCA6Q8N139 1617 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms