RNA–Protein interactions for RNA: ENST00000395090.5

RTN1-203, Transcript of reticulon 1, humanhuman

TSL 2 BASIC

Gene RTN1, Length 1,609 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-203ENST00000395090 TSPYL2Q9H2G4 693 aaPredicted RBP18.09■□□□□ 0.49
RTN1-203ENST00000395090 CLIP1P30622 1438 aa18.08■□□□□ 0.49
RTN1-203ENST00000395090 GRIN2AQ12879 1464 aa18.07■□□□□ 0.48
RTN1-203ENST00000395090 HS6ST3Q8IZP7 471 aa18.05■□□□□ 0.48
RTN1-203ENST00000395090 HAP1P54257 671 aaPredicted RBP18.04■□□□□ 0.48
RTN1-203ENST00000395090 PAXIP1Q6ZW49 1069 aaPredicted RBP18.01■□□□□ 0.47
RTN1-203ENST00000395090 VGFO15240 615 aaPredicted RBP18.01■□□□□ 0.47
RTN1-203ENST00000395090 CTTNBP2Q8WZ74 1663 aa18.01■□□□□ 0.47
RTN1-203ENST00000395090 KIAA0586Q9BVV6 1533 aa17.99■□□□□ 0.47
RTN1-203ENST00000395090 NUP160Q12769 1436 aa17.99■□□□□ 0.47
RTN1-203ENST00000395090 RANGAP1P46060 587 aaPredicted RBP17.99■□□□□ 0.47
RTN1-203ENST00000395090 ARHGAP35Q9NRY4 1499 aa17.98■□□□□ 0.47
RTN1-203ENST00000395090 CFAP44Q96MT7 982 aa17.98■□□□□ 0.47
RTN1-203ENST00000395090 SPRYD3Q8NCJ5 442 aa17.94■□□□□ 0.46
RTN1-203ENST00000395090 CEP170Q5SW79 1584 aa17.94■□□□□ 0.46
RTN1-203ENST00000395090 IQGAP2Q13576 1575 aa17.94■□□□□ 0.46
RTN1-203ENST00000395090 PAK3O75914 559 aaPredicted RBP17.94■□□□□ 0.46
RTN1-203ENST00000395090 ARAP1Q96P48 1450 aa17.93■□□□□ 0.46
RTN1-203ENST00000395090 CCDC61Q9Y6R9 512 aa17.93■□□□□ 0.46
RTN1-203ENST00000395090 EFCAB5A4FU69 1503 aa17.92■□□□□ 0.46
RTN1-203ENST00000395090 STK25O00506 426 aa17.92■□□□□ 0.46
RTN1-203ENST00000395090 DNAJC5Q9H3Z4 198 aa17.91■□□□□ 0.46
RTN1-203ENST00000395090 VPS8Q8N3P4 1428 aa17.91■□□□□ 0.46
RTN1-203ENST00000395090 SGIP1Q9BQI5 828 aa17.9■□□□□ 0.46
RTN1-203ENST00000395090 UGGT2Q9NYU1 1516 aa17.9■□□□□ 0.46
RTN1-203ENST00000395090 CHD1O14646 1710 aa17.89■□□□□ 0.45
RTN1-203ENST00000395090 SAMD9Q5K651 1589 aa17.88■□□□□ 0.45
RTN1-203ENST00000395090 ZNF467Q7Z7K2 595 aaPredicted RBP17.87■□□□□ 0.45
RTN1-203ENST00000395090 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.87■□□□□ 0.45
RTN1-203ENST00000395090 JPH4Q96JJ6 628 aa17.87■□□□□ 0.45
RTN1-203ENST00000395090 ZFP91Q96JP5 570 aaPredicted RBP17.87■□□□□ 0.45
RTN1-203ENST00000395090 P3H3Q8IVL6 736 aa17.85■□□□□ 0.45
RTN1-203ENST00000395090 BCL11BQ9C0K0 894 aaPredicted RBP17.83■□□□□ 0.44
RTN1-203ENST00000395090 FHOD3Q2V2M9 1422 aa17.82■□□□□ 0.44
RTN1-203ENST00000395090 STK24Q9Y6E0 443 aa17.81■□□□□ 0.44
RTN1-203ENST00000395090 DISP1Q96F81 1524 aa17.81■□□□□ 0.44
RTN1-203ENST00000395090 FMN1Q68DA7 1419 aa17.78■□□□□ 0.44
RTN1-203ENST00000395090 NKX1-1Q15270 411 aaPredicted RBP17.78■□□□□ 0.44
RTN1-203ENST00000395090 VSIG10Q8N0Z9 540 aa17.78■□□□□ 0.44
RTN1-203ENST00000395090 PCDHB8Q9UN66 801 aa17.77■□□□□ 0.44
RTN1-203ENST00000395090 PCDHB13Q9Y5F0 798 aa17.77■□□□□ 0.44
RTN1-203ENST00000395090 CD44P16070 742 aaKnown RBP17.76■□□□□ 0.43
RTN1-203ENST00000395090 CLASP1Q7Z460 1538 aa17.76■□□□□ 0.43
RTN1-203ENST00000395090 ZNF579Q8NAF0 562 aaKnown RBP17.76■□□□□ 0.43
RTN1-203ENST00000395090 CARMIL2Q6F5E8 1435 aa17.75■□□□□ 0.43
RTN1-203ENST00000395090 KIAA0556O60303 1618 aa17.75■□□□□ 0.43
RTN1-203ENST00000395090 PDAP1Q13442 181 aaKnown RBP17.75■□□□□ 0.43
RTN1-203ENST00000395090 SHROOM2Q13796 1616 aa17.74■□□□□ 0.43
RTN1-203ENST00000395090 ZRANB1Q9UGI0 708 aa17.74■□□□□ 0.43
RTN1-203ENST00000395090 CASKIN1Q8WXD9 1431 aa17.73■□□□□ 0.43
RTN1-203ENST00000395090 PRG4Q92954 1404 aaPredicted RBP17.73■□□□□ 0.43
RTN1-203ENST00000395090 KIF12Q96FN5 646 aa17.71■□□□□ 0.43
RTN1-203ENST00000395090 MAP3K13O43283 966 aa17.7■□□□□ 0.42
RTN1-203ENST00000395090 FYCO1Q9BQS8 1478 aa17.69■□□□□ 0.42
RTN1-203ENST00000395090 MAP3K1Q13233 1512 aa17.69■□□□□ 0.42
RTN1-203ENST00000395090 TSHZ2Q9NRE2 1034 aa17.69■□□□□ 0.42
RTN1-203ENST00000395090 IFNL1Q8IU54 200 aa17.67■□□□□ 0.42
RTN1-203ENST00000395090 GTPBP6O43824 516 aaPredicted RBP17.66■□□□□ 0.42
RTN1-203ENST00000395090 PSEN1P49768 467 aa17.66■□□□□ 0.42
RTN1-203ENST00000395090 PCF11O94913 1555 aaKnown RBP17.65■□□□□ 0.42
RTN1-203ENST00000395090 PPARGC1BQ86YN6 1023 aaKnown RBP17.65■□□□□ 0.42
RTN1-203ENST00000395090 RYDENQ9NUL5 291 aaKnown RBP17.62■□□□□ 0.41
RTN1-203ENST00000395090 KANK4Q5T7N3 995 aaPredicted RBP17.61■□□□□ 0.41
RTN1-203ENST00000395090 PHF12Q96QT6 1004 aa17.61■□□□□ 0.41
RTN1-203ENST00000395090 KDM2AQ9Y2K7 1162 aa17.61■□□□□ 0.41
RTN1-203ENST00000395090 PTPRGP23470 1445 aa17.61■□□□□ 0.41
RTN1-203ENST00000395090 ATP1B4Q9UN42 357 aaPredicted RBP17.61■□□□□ 0.41
RTN1-203ENST00000395090 C19orf67A6NJJ6 358 aa17.6■□□□□ 0.41
RTN1-203ENST00000395090 TIAM1Q13009 1591 aa17.59■□□□□ 0.41
RTN1-203ENST00000395090 ERCC6L2Q5T890 1561 aa17.59■□□□□ 0.41
RTN1-203ENST00000395090 TRIM26Q12899 539 aaPredicted RBP17.58■□□□□ 0.41
RTN1-203ENST00000395090 TTBK1Q5TCY1 1321 aaPredicted RBP17.57■□□□□ 0.4
RTN1-203ENST00000395090 PLB1Q6P1J6 1458 aa17.57■□□□□ 0.4
RTN1-203ENST00000395090 HECW1Q76N89 1606 aa17.55■□□□□ 0.4
RTN1-203ENST00000395090 RAPGEF6Q8TEU7 1601 aa17.55■□□□□ 0.4
RTN1-203ENST00000395090 ABCA8O94911 1581 aa17.55■□□□□ 0.4
RTN1-203ENST00000395090 NUP153P49790 1475 aaKnown RBP17.55■□□□□ 0.4
RTN1-203ENST00000395090 CCDC18Q5T9S5 1454 aa17.55■□□□□ 0.4
RTN1-203ENST00000395090 EPRSP07814 1512 aaKnown RBP17.54■□□□□ 0.4
RTN1-203ENST00000395090 LRRC9Q6ZRR7 1453 aa17.54■□□□□ 0.4
RTN1-203ENST00000395090 CFAP43Q8NDM7 1665 aa17.53■□□□□ 0.4
RTN1-203ENST00000395090 LRRIQ1Q96JM4 1722 aa17.53■□□□□ 0.4
RTN1-203ENST00000395090 UACAQ9BZF9 1416 aa17.51■□□□□ 0.39
RTN1-203ENST00000395090 PCGF6Q9BYE7 350 aa17.47■□□□□ 0.39
RTN1-203ENST00000395090 CDK13Q14004 1512 aaKnown RBP17.46■□□□□ 0.39
RTN1-203ENST00000395090 ATP10BO94823 1461 aa17.46■□□□□ 0.39
RTN1-203ENST00000395090 UHRF1BP1LA0JNW5 1464 aa17.45■□□□□ 0.38
RTN1-203ENST00000395090 CDK11AQ9UQ88 783 aaPredicted RBP17.45■□□□□ 0.38
RTN1-203ENST00000395090 MTUS2Q5JR59 1369 aa17.45■□□□□ 0.38
RTN1-203ENST00000395090 CABP2Q9NPB3 220 aa17.44■□□□□ 0.38
RTN1-203ENST00000395090 ABCC2Q92887 1545 aa17.43■□□□□ 0.38
RTN1-203ENST00000395090 ARID3CA6NKF2 412 aa17.43■□□□□ 0.38
RTN1-203ENST00000395090 MS4A3Q96HJ5 214 aa17.43■□□□□ 0.38
RTN1-203ENST00000395090 MAGI3Q5TCQ9 1506 aa17.42■□□□□ 0.38
RTN1-203ENST00000395090 MFRPQ9BY79 579 aa17.41■□□□□ 0.38
RTN1-203ENST00000395090 EHBP1L1Q8N3D4 1523 aa17.4■□□□□ 0.38
RTN1-203ENST00000395090 HAX1O00165 279 aa17.39■□□□□ 0.38
RTN1-203ENST00000395090 EFCAB3Q8N7B9 438 aa17.39■□□□□ 0.38
RTN1-203ENST00000395090 ARHGEF11O15085 1522 aa17.38■□□□□ 0.37
RTN1-203ENST00000395090 PLEKHD1A6NEE1 506 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms