RNA–Protein interactions for RNA: ENSMUST00000172332.3

Ccdc71l-201, Transcript of Coiled-coil domain-containing 71-like, mousemouse

APPRIS P1 BASIC

Gene Ccdc71l, Length 4,240 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc71l-201ENSMUST00000172332 Rwdd1Q9CQK7 243 aa20.6■□□□□ 0.89
Ccdc71l-201ENSMUST00000172332 Ccnb3Q810T2 1396 aa20.6■□□□□ 0.89
Ccdc71l-201ENSMUST00000172332 AknaQ80VW7 1404 aa20.6■□□□□ 0.89
Ccdc71l-201ENSMUST00000172332 Bcl11aQ9QYE3 773 aa20.59■□□□□ 0.89
Ccdc71l-201ENSMUST00000172332 Mapk8ip3Q9ESN9 1337 aa20.59■□□□□ 0.89
Ccdc71l-201ENSMUST00000172332 NgefQ8CHT1 710 aa20.58■□□□□ 0.88
Ccdc71l-201ENSMUST00000172332 LrpprcQ6PB66 1392 aaKnown RBP20.56■□□□□ 0.88
Ccdc71l-201ENSMUST00000172332 Carmil1Q6EDY6 1374 aa20.56■□□□□ 0.88
Ccdc71l-201ENSMUST00000172332 Dhx29Q6PGC1 1365 aaKnown RBP20.56■□□□□ 0.88
Ccdc71l-201ENSMUST00000172332 Plcb2A3KGF7 1181 aa20.55■□□□□ 0.88
Ccdc71l-201ENSMUST00000172332 Mak16Q8BGS0 296 aaKnown RBP20.55■□□□□ 0.88
Ccdc71l-201ENSMUST00000172332 Ppm1gQ61074 542 aa20.54■□□□□ 0.88
Ccdc71l-201ENSMUST00000172332 CrbnQ8C7D2 445 aa20.53■□□□□ 0.88
Ccdc71l-201ENSMUST00000172332 Ccdc9Q8VC31 543 aaKnown RBP20.53■□□□□ 0.88
Ccdc71l-201ENSMUST00000172332 Plin1Q8CGN5 517 aa20.52■□□□□ 0.88
Ccdc71l-201ENSMUST00000172332 Stk26Q99JT2 416 aa20.52■□□□□ 0.88
Ccdc71l-201ENSMUST00000172332 Dcaf11Q91VU6 549 aa20.51■□□□□ 0.87
Ccdc71l-201ENSMUST00000172332 Senp3Q9EP97 568 aaKnown RBP20.5■□□□□ 0.87
Ccdc71l-201ENSMUST00000172332 Usp47Q8BY87 1376 aa20.49■□□□□ 0.87
Ccdc71l-201ENSMUST00000172332 Smg6P61406 1418 aaKnown RBP20.49■□□□□ 0.87
Ccdc71l-201ENSMUST00000172332 Trim44Q9QXA7 346 aa20.47■□□□□ 0.87
Ccdc71l-201ENSMUST00000172332 Gtf2e1Q9D0D5 440 aa20.47■□□□□ 0.87
Ccdc71l-201ENSMUST00000172332 Tmf1B9EKI3 1091 aa20.46■□□□□ 0.87
Ccdc71l-201ENSMUST00000172332 Slc4a1apE9PX68 744 aa20.46■□□□□ 0.87
Ccdc71l-201ENSMUST00000172332 Srcin1Q9QWI6 1250 aa20.45■□□□□ 0.86
Ccdc71l-201ENSMUST00000172332 Fhad1A6PWD2 1420 aa20.45■□□□□ 0.86
Ccdc71l-201ENSMUST00000172332 Nup155Q99P88 1391 aaKnown RBP20.45■□□□□ 0.86
Ccdc71l-201ENSMUST00000172332 Lmod3E9QA62 571 aa20.45■□□□□ 0.86
Ccdc71l-201ENSMUST00000172332 Cluap1Q8R3P7 413 aa20.45■□□□□ 0.86
Ccdc71l-201ENSMUST00000172332 Cttnbp2B9EJA2 1648 aa20.44■□□□□ 0.86
Ccdc71l-201ENSMUST00000172332 Htatsf1Q8BGC0 757 aa20.44■□□□□ 0.86
Ccdc71l-201ENSMUST00000172332 U2af1Q9D883 239 aaKnown RBP20.43■□□□□ 0.86
Ccdc71l-201ENSMUST00000172332 ChgaP26339 463 aaKnown RBP20.42■□□□□ 0.86
Ccdc71l-201ENSMUST00000172332 Sart1Q9Z315 806 aaKnown RBP20.41■□□□□ 0.86
Ccdc71l-201ENSMUST00000172332 Znf330Q922H9 316 aa20.4■□□□□ 0.86
Ccdc71l-201ENSMUST00000172332 Kif3bQ61771 747 aa20.4■□□□□ 0.86
Ccdc71l-201ENSMUST00000172332 Tmco5bQ80X59 307 aa20.4■□□□□ 0.86
Ccdc71l-201ENSMUST00000172332 Frmpd1A2AKB4 1549 aa20.39■□□□□ 0.85
Ccdc71l-201ENSMUST00000172332 Golga2Q921M4 999 aa20.38■□□□□ 0.85
Ccdc71l-201ENSMUST00000172332 Zfp644E9QA22 1323 aa20.38■□□□□ 0.85
Ccdc71l-201ENSMUST00000172332 Plekhh2Q8C115 1491 aa20.38■□□□□ 0.85
Ccdc71l-201ENSMUST00000172332 Ppp1r18Q8BQ30 594 aa20.37■□□□□ 0.85
Ccdc71l-201ENSMUST00000172332 Dnai1Q8C0M8 701 aa20.37■□□□□ 0.85
Ccdc71l-201ENSMUST00000172332 Pank3Q8R2W9 370 aa20.37■□□□□ 0.85
Ccdc71l-201ENSMUST00000172332 Rock2P70336 1388 aa20.37■□□□□ 0.85
Ccdc71l-201ENSMUST00000172332 Inpp5dQ9ES52 1191 aa20.36■□□□□ 0.85
Ccdc71l-201ENSMUST00000172332 U2surpQ6NV83 1029 aaKnown RBP20.35■□□□□ 0.85
Ccdc71l-201ENSMUST00000172332 Fan1Q69ZT1 1020 aa20.35■□□□□ 0.85
Ccdc71l-201ENSMUST00000172332 Znf710Q3U288 666 aa20.35■□□□□ 0.85
Ccdc71l-201ENSMUST00000172332 EspnQ9ET47 871 aa20.35■□□□□ 0.85
Ccdc71l-201ENSMUST00000172332 PtmaP26350 111 aa20.34■□□□□ 0.85
Ccdc71l-201ENSMUST00000172332 Lemd3Q9WU40 921 aa20.33■□□□□ 0.85
Ccdc71l-201ENSMUST00000172332 Znf316Q6PGE4 1016 aa20.32■□□□□ 0.84
Ccdc71l-201ENSMUST00000172332 Mbd3Q9Z2D8 285 aaKnown RBP20.32■□□□□ 0.84
Ccdc71l-201ENSMUST00000172332 Birc3O08863 600 aa20.32■□□□□ 0.84
Ccdc71l-201ENSMUST00000172332 Ipo9Q91YE6 1041 aa20.32■□□□□ 0.84
Ccdc71l-201ENSMUST00000172332 WrnO09053 1401 aa20.31■□□□□ 0.84
Ccdc71l-201ENSMUST00000172332 Irx3P81067 507 aa20.3■□□□□ 0.84
Ccdc71l-201ENSMUST00000172332 NudcO35685 332 aaKnown RBP20.3■□□□□ 0.84
Ccdc71l-201ENSMUST00000172332 Esx1O88933 382 aa20.3■□□□□ 0.84
Ccdc71l-201ENSMUST00000172332 Map7O88735 730 aa20.29■□□□□ 0.84
Ccdc71l-201ENSMUST00000172332 UacaQ8CGB3 1411 aa20.29■□□□□ 0.84
Ccdc71l-201ENSMUST00000172332 Rtn4Q99P72 1162 aaKnown RBP20.28■□□□□ 0.84
Ccdc71l-201ENSMUST00000172332 Ksr2Q3UVC0 959 aa20.27■□□□□ 0.84
Ccdc71l-201ENSMUST00000172332 Rad54l2Q99NG0 1466 aa20.27■□□□□ 0.84
Ccdc71l-201ENSMUST00000172332 Tdrd9Q14BI7 1383 aa20.26■□□□□ 0.83
Ccdc71l-201ENSMUST00000172332 Dapk1Q80YE7 1442 aa20.22■□□□□ 0.83
Ccdc71l-201ENSMUST00000172332 Naip1Q9QWK5 1403 aa20.22■□□□□ 0.83
Ccdc71l-201ENSMUST00000172332 Hsp90b1P08113 802 aaKnown RBP20.21■□□□□ 0.83
Ccdc71l-201ENSMUST00000172332 MyclP10166 368 aa20.21■□□□□ 0.83
Ccdc71l-201ENSMUST00000172332 Mfap1aC0HKD8 439 aaKnown RBP20.21■□□□□ 0.83
Ccdc71l-201ENSMUST00000172332 Mfap1bC0HKD9 439 aaKnown RBP20.21■□□□□ 0.83
Ccdc71l-201ENSMUST00000172332 Rpgrip1lQ8CG73 1264 aa20.2■□□□□ 0.82
Ccdc71l-201ENSMUST00000172332 Iqcf3Q9D498 203 aa20.2■□□□□ 0.82
Ccdc71l-201ENSMUST00000172332 Cc2d2aQ8CFW7 1633 aa20.2■□□□□ 0.82
Ccdc71l-201ENSMUST00000172332 Arap1Q4LDD4 1452 aa20.19■□□□□ 0.82
Ccdc71l-201ENSMUST00000172332 Pibf1E9Q6K3 756 aa20.19■□□□□ 0.82
Ccdc71l-201ENSMUST00000172332 GorabQ8BRM2 368 aa20.19■□□□□ 0.82
Ccdc71l-201ENSMUST00000172332 KnstrnQ9D9Z1 312 aaKnown RBP20.19■□□□□ 0.82
Ccdc71l-201ENSMUST00000172332 Slc4a2P13808 1237 aaKnown RBP20.18■□□□□ 0.82
Ccdc71l-201ENSMUST00000172332 Ipo8Q7TMY7 1010 aa20.18■□□□□ 0.82
Ccdc71l-201ENSMUST00000172332 Urb2E9Q7L1 1524 aaKnown RBP20.16■□□□□ 0.82
Ccdc71l-201ENSMUST00000172332 Dnttip2Q8R2M2 758 aaKnown RBP20.16■□□□□ 0.82
Ccdc71l-201ENSMUST00000172332 Dhx57Q6P5D3 1388 aaKnown RBP20.15■□□□□ 0.82
Ccdc71l-201ENSMUST00000172332 PtprkP35822 1457 aa20.14■□□□□ 0.82
Ccdc71l-201ENSMUST00000172332 Top2aQ01320 1528 aaKnown RBP20.14■□□□□ 0.81
Ccdc71l-201ENSMUST00000172332 Chmp4bQ9D8B3 224 aaKnown RBP20.13■□□□□ 0.81
Ccdc71l-201ENSMUST00000172332 Shroom4Q1W617 1475 aa20.13■□□□□ 0.81
Ccdc71l-201ENSMUST00000172332 Ncapd3Q6ZQK0 1506 aa20.13■□□□□ 0.81
Ccdc71l-201ENSMUST00000172332 Sox12Q04890 314 aa20.12■□□□□ 0.81
Ccdc71l-201ENSMUST00000172332 Pabpn1Q8CCS6 302 aaKnown RBP20.12■□□□□ 0.81
Ccdc71l-201ENSMUST00000172332 Tnnt1O88346 262 aa20.11■□□□□ 0.81
Ccdc71l-201ENSMUST00000172332 Zscan10Q3URR7 782 aa20.11■□□□□ 0.81
Ccdc71l-201ENSMUST00000172332 Tsen2Q6P7W5 460 aa20.11■□□□□ 0.81
Ccdc71l-201ENSMUST00000172332 Q7TT23 1179 aa20.11■□□□□ 0.81
Ccdc71l-201ENSMUST00000172332 Fam184bQ0KK56 942 aa20.11■□□□□ 0.81
Ccdc71l-201ENSMUST00000172332 Rock1P70335 1354 aa20.1■□□□□ 0.81
Ccdc71l-201ENSMUST00000172332 CatipB9EKE5 520 aa20.1■□□□□ 0.81
Ccdc71l-201ENSMUST00000172332 Pak3Q61036 559 aa20.1■□□□□ 0.81
Ccdc71l-201ENSMUST00000172332 Usp40Q8BWR4 1235 aa20.1■□□□□ 0.81
Retrieved 100 of 22,080 RNA–protein pairs in 151.8 ms