RNA–Protein interactions for RNA: ENSMUST00000172332.3

Ccdc71l-201, Transcript of Coiled-coil domain-containing 71-like, mousemouse

APPRIS P1 BASIC

Gene Ccdc71l, Length 4,240 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc71l-201ENSMUST00000172332 Rhox8Q6VSS7 320 aa28.66■■■□□ 2.18
Ccdc71l-201ENSMUST00000172332 Ehmt2Q9Z148 1263 aaKnown RBP26.27■■□□□ 1.8
Ccdc71l-201ENSMUST00000172332 Ccdc136Q3TVA9 1136 aa25.81■■□□□ 1.72
Ccdc71l-201ENSMUST00000172332 NischQ80TM9 1593 aa25.72■■□□□ 1.71
Ccdc71l-201ENSMUST00000172332 Rpgrip1Q9EPQ2 1331 aa25.69■■□□□ 1.7
Ccdc71l-201ENSMUST00000172332 Cngb1E1AZ71 1325 aa25.13■■□□□ 1.61
Ccdc71l-201ENSMUST00000172332 Gab3Q8BSM5 595 aa25.13■■□□□ 1.61
Ccdc71l-201ENSMUST00000172332 Esf1Q3V1V3 845 aaKnown RBP24.99■■□□□ 1.59
Ccdc71l-201ENSMUST00000172332 Trim41Q5NCC3 630 aa24.98■■□□□ 1.59
Ccdc71l-201ENSMUST00000172332 Zeb1Q64318 1117 aa24.89■■□□□ 1.58
Ccdc71l-201ENSMUST00000172332 Wdr66E9Q743 1299 aa24.76■■□□□ 1.55
Ccdc71l-201ENSMUST00000172332 Acin1Q9JIX8 1338 aaKnown RBP24.5■■□□□ 1.51
Ccdc71l-201ENSMUST00000172332 Abcc9P70170 1546 aa24.5■■□□□ 1.51
Ccdc71l-201ENSMUST00000172332 Las1lA2BE28 776 aaKnown RBP24.5■■□□□ 1.51
Ccdc71l-201ENSMUST00000172332 Myt1lP97500 1187 aa24.49■■□□□ 1.51
Ccdc71l-201ENSMUST00000172332 Npm2Q80W85 207 aa24.38■■□□□ 1.49
Ccdc71l-201ENSMUST00000172332 Ube2uB1AUC4 352 aa24.24■■□□□ 1.47
Ccdc71l-201ENSMUST00000172332 UbtfP25976 765 aaKnown RBP24.17■■□□□ 1.46
Ccdc71l-201ENSMUST00000172332 Gm35339A0A140LHH9 1649 aa24.11■■□□□ 1.45
Ccdc71l-201ENSMUST00000172332 HrcG5E8J6 738 aa24.06■■□□□ 1.44
Ccdc71l-201ENSMUST00000172332 Ccdc180J3QNE4 1664 aa23.93■■□□□ 1.42
Ccdc71l-201ENSMUST00000172332 Abcc8B2RUS7 1588 aa23.93■■□□□ 1.42
Ccdc71l-201ENSMUST00000172332 Pcgf6Q99NA9 353 aa23.92■■□□□ 1.42
Ccdc71l-201ENSMUST00000172332 NefmP08553 848 aa23.87■■□□□ 1.41
Ccdc71l-201ENSMUST00000172332 Ppargc1bQ8VHJ7 1014 aa23.7■■□□□ 1.38
Ccdc71l-201ENSMUST00000172332 Il27Q8K3I6 234 aa23.7■■□□□ 1.38
Ccdc71l-201ENSMUST00000172332 Zcchc6Q5BLK4 1491 aaKnown RBP23.69■■□□□ 1.38
Ccdc71l-201ENSMUST00000172332 Supt5hO55201 1082 aaKnown RBP23.59■■□□□ 1.37
Ccdc71l-201ENSMUST00000172332 Slc24a1Q91WD8 1130 aa23.51■■□□□ 1.35
Ccdc71l-201ENSMUST00000172332 Rtl1Q7M732 1744 aa23.45■■□□□ 1.34
Ccdc71l-201ENSMUST00000172332 Ap3b1Q9Z1T1 1105 aa23.42■■□□□ 1.34
Ccdc71l-201ENSMUST00000172332 CenpbP27790 599 aa23.37■■□□□ 1.33
Ccdc71l-201ENSMUST00000172332 Cdk11bP24788 784 aaKnown RBP23.36■■□□□ 1.33
Ccdc71l-201ENSMUST00000172332 Mier1Q5UAK0 511 aa23.28■■□□□ 1.32
Ccdc71l-201ENSMUST00000172332 Fam50aQ9WV03 339 aaKnown RBP23.26■■□□□ 1.31
Ccdc71l-201ENSMUST00000172332 Pelp1Q9DBD5 1123 aaKnown RBP23.24■■□□□ 1.31
Ccdc71l-201ENSMUST00000172332 Nop58Q6DFW4 536 aaKnown RBP23.22■■□□□ 1.31
Ccdc71l-201ENSMUST00000172332 Neurod1Q60867 357 aa23.09■■□□□ 1.29
Ccdc71l-201ENSMUST00000172332 NclP09405 707 aaKnown RBP23.05■■□□□ 1.28
Ccdc71l-201ENSMUST00000172332 Stra8P70278 393 aa23.02■■□□□ 1.28
Ccdc71l-201ENSMUST00000172332 Plekhg3Q4VAC9 1341 aa23■■□□□ 1.27
Ccdc71l-201ENSMUST00000172332 Chic1Q8CBW7 227 aa22.98■■□□□ 1.27
Ccdc71l-201ENSMUST00000172332 TonslQ6NZL6 1363 aa22.97■■□□□ 1.27
Ccdc71l-201ENSMUST00000172332 Lmod2Q3UHZ5 550 aa22.84■■□□□ 1.25
Ccdc71l-201ENSMUST00000172332 Eif5bQ05D44 1216 aaKnown RBP22.8■■□□□ 1.24
Ccdc71l-201ENSMUST00000172332 Eid3Q3V124 375 aa22.78■■□□□ 1.24
Ccdc71l-201ENSMUST00000172332 Sall2Q9QX96 1004 aa22.77■■□□□ 1.24
Ccdc71l-201ENSMUST00000172332 Mapk8ip2Q9ERE9 830 aa22.77■■□□□ 1.23
Ccdc71l-201ENSMUST00000172332 NrdcQ8BHG1 1161 aa22.69■■□□□ 1.22
Ccdc71l-201ENSMUST00000172332 Ttbk1Q6PCN3 1308 aa22.65■■□□□ 1.22
Ccdc71l-201ENSMUST00000172332 Dcaf1Q80TR8 1506 aa22.63■■□□□ 1.21
Ccdc71l-201ENSMUST00000172332 Amer1Q7TS75 1132 aa22.62■■□□□ 1.21
Ccdc71l-201ENSMUST00000172332 Tnnt3Q9QZ47 272 aa22.6■■□□□ 1.21
Ccdc71l-201ENSMUST00000172332 ClspnQ80YR7 1315 aa22.6■■□□□ 1.21
Ccdc71l-201ENSMUST00000172332 Gm38655A0A286YDK6 273 aa22.6■■□□□ 1.21
Ccdc71l-201ENSMUST00000172332 Cep164Q5DU05 1446 aa22.58■■□□□ 1.21
Ccdc71l-201ENSMUST00000172332 Zbtb7cQ8VCZ7 619 aa22.52■■□□□ 1.2
Ccdc71l-201ENSMUST00000172332 Npm1Q61937 292 aaKnown RBP22.5■■□□□ 1.19
Ccdc71l-201ENSMUST00000172332 Rb1cc1Q9ESK9 1588 aa22.5■■□□□ 1.19
Ccdc71l-201ENSMUST00000172332 Brd4Q9ESU6 1400 aaKnown RBP22.45■■□□□ 1.18
Ccdc71l-201ENSMUST00000172332 NacadQ5SWP3 1504 aa22.43■■□□□ 1.18
Ccdc71l-201ENSMUST00000172332 Clip1Q922J3 1391 aa22.42■■□□□ 1.18
Ccdc71l-201ENSMUST00000172332 Csrnp3P59055 597 aa22.42■■□□□ 1.18
Ccdc71l-201ENSMUST00000172332 Anp32bQ9EST5 272 aaKnown RBP22.37■■□□□ 1.17
Ccdc71l-201ENSMUST00000172332 Os9Q8K2C7 672 aa22.37■■□□□ 1.17
Ccdc71l-201ENSMUST00000172332 Zbtb4Q5F293 982 aa22.34■■□□□ 1.17
Ccdc71l-201ENSMUST00000172332 Kdm5dQ62240 1548 aa22.27■■□□□ 1.16
Ccdc71l-201ENSMUST00000172332 NeflP08551 543 aa22.24■■□□□ 1.15
Ccdc71l-201ENSMUST00000172332 Anks4bQ8K3X6 423 aa22.24■■□□□ 1.15
Ccdc71l-201ENSMUST00000172332 Ubl4bQ9CQ84 188 aa22.2■■□□□ 1.14
Ccdc71l-201ENSMUST00000172332 Hnrnpul2Q00PI9 745 aaKnown RBP22.19■■□□□ 1.14
Ccdc71l-201ENSMUST00000172332 Aebp2Q9Z248 504 aaKnown RBP22.19■■□□□ 1.14
Ccdc71l-201ENSMUST00000172332 4933416C03RikQ3V063 378 aa22.17■■□□□ 1.14
Ccdc71l-201ENSMUST00000172332 Myt1Q8CFC2 1127 aa22.14■■□□□ 1.14
Ccdc71l-201ENSMUST00000172332 Ifnlr1Q8CGK5 535 aa22.09■■□□□ 1.13
Ccdc71l-201ENSMUST00000172332 Fkbp15Q6P9Q6 1216 aaKnown RBP22.08■■□□□ 1.13
Ccdc71l-201ENSMUST00000172332 Chic2Q9D9G3 165 aa22.06■■□□□ 1.12
Ccdc71l-201ENSMUST00000172332 Prdm10Q3UTQ7 1184 aa22.01■■□□□ 1.11
Ccdc71l-201ENSMUST00000172332 Anp32aO35381 247 aa21.98■■□□□ 1.11
Ccdc71l-201ENSMUST00000172332 Rsf1E9PWW9 1441 aaKnown RBP21.97■■□□□ 1.11
Ccdc71l-201ENSMUST00000172332 Baz1aO88379 1555 aa21.95■■□□□ 1.1
Ccdc71l-201ENSMUST00000172332 BlmO88700 1416 aa21.94■■□□□ 1.1
Ccdc71l-201ENSMUST00000172332 Erich6D3Z6S9 713 aa21.91■■□□□ 1.1
Ccdc71l-201ENSMUST00000172332 ScribQ80U72 1612 aa21.91■■□□□ 1.1
Ccdc71l-201ENSMUST00000172332 Golga3P55937 1487 aa21.87■■□□□ 1.09
Ccdc71l-201ENSMUST00000172332 Aplp2Q06335 707 aa21.86■■□□□ 1.09
Ccdc71l-201ENSMUST00000172332 Setd5Q5XJV7 1441 aa21.84■■□□□ 1.09
Ccdc71l-201ENSMUST00000172332 1700123L14RikQ3V2K7 440 aa21.84■■□□□ 1.09
Ccdc71l-201ENSMUST00000172332 Mrs2Q5NCE8 434 aa21.8■■□□□ 1.08
Ccdc71l-201ENSMUST00000172332 Calr4Q3TQS0 420 aa21.78■■□□□ 1.08
Ccdc71l-201ENSMUST00000172332 Ccer2J3QPU5 274 aa21.76■■□□□ 1.07
Ccdc71l-201ENSMUST00000172332 Ppp4r2Q0VGB7 417 aa21.74■■□□□ 1.07
Ccdc71l-201ENSMUST00000172332 DaxxO35613 739 aa21.69■■□□□ 1.06
Ccdc71l-201ENSMUST00000172332 Rtl5Q5DTT4 599 aa21.69■■□□□ 1.06
Ccdc71l-201ENSMUST00000172332 Ccdc88bQ4QRL3 1481 aa21.68■■□□□ 1.06
Ccdc71l-201ENSMUST00000172332 Polr3glQ8R0C0 218 aa21.66■■□□□ 1.06
Ccdc71l-201ENSMUST00000172332 ArxO35085 564 aa21.66■■□□□ 1.06
Ccdc71l-201ENSMUST00000172332 Sycp2Q9CUU3 1500 aa21.65■■□□□ 1.06
Ccdc71l-201ENSMUST00000172332 Rad21Q61550 635 aaKnown RBP21.65■■□□□ 1.06
Ccdc71l-201ENSMUST00000172332 Nlrp6Q91WS2 869 aa21.63■■□□□ 1.05
Retrieved 100 of 22,080 RNA–protein pairs in 51.5 ms