Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 Gm25239-201ENSMUST00000174915 86 ntBASIC66.09■■■■■ 8.17
Pabpn1Q8CCS6 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC61.81■■■■■ 7.49
Pabpn1Q8CCS6 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC60.79■■■■■ 7.32
Pabpn1Q8CCS6 Gm24109-201ENSMUST00000175489 103 ntBASIC58.05■■■■■ 6.88
Pabpn1Q8CCS6 Gm15042-201ENSMUST00000120212 883 ntBASIC56.28■■■■■ 6.6
Pabpn1Q8CCS6 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC56.04■■■■■ 6.56
Pabpn1Q8CCS6 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC55.94■■■■■ 6.55
Pabpn1Q8CCS6 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC55.55■■■■■ 6.48
Pabpn1Q8CCS6 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC55.2■■■■■ 6.43
Pabpn1Q8CCS6 Gm23366-201ENSMUST00000175022 89 ntBASIC54.99■■■■■ 6.39
Pabpn1Q8CCS6 Gm15045-201ENSMUST00000117359 883 ntBASIC54.81■■■■■ 6.36
Pabpn1Q8CCS6 AC153911.1-202ENSMUST00000218534 1034 ntBASIC54.65■■■■■ 6.34
Pabpn1Q8CCS6 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC54.27■■■■■ 6.28
Pabpn1Q8CCS6 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC54.26■■■■■ 6.28
Pabpn1Q8CCS6 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC54.2■■■■■ 6.27
Pabpn1Q8CCS6 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC53.86■■■■■ 6.21
Pabpn1Q8CCS6 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC52.92■■■■■ 6.06
Pabpn1Q8CCS6 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC52.82■■■■■ 6.05
Pabpn1Q8CCS6 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC52.76■■■■■ 6.04
Pabpn1Q8CCS6 Gm25238-201ENSMUST00000174914 89 ntBASIC52.67■■■■■ 6.02
Pabpn1Q8CCS6 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC52.57■■■■■ 6.01
Pabpn1Q8CCS6 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC52.34■■■■■ 5.97
Pabpn1Q8CCS6 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC51.56■■■■■ 5.84
Pabpn1Q8CCS6 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC51.52■■■■■ 5.84
Pabpn1Q8CCS6 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC51.44■■■■■ 5.83
Pabpn1Q8CCS6 Gm25262-201ENSMUST00000174934 133 ntBASIC51.19■■■■■ 5.79
Pabpn1Q8CCS6 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC50.91■■■■■ 5.74
Pabpn1Q8CCS6 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC50.78■■■■■ 5.72
Pabpn1Q8CCS6 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC50.62■■■■■ 5.69
Pabpn1Q8CCS6 Gm26115-201ENSMUST00000175605 87 ntBASIC50.54■■■■■ 5.68
Pabpn1Q8CCS6 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC50.45■■■■■ 5.67
Pabpn1Q8CCS6 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC50.36■■■■■ 5.65
Pabpn1Q8CCS6 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC50.18■■■■■ 5.62
Pabpn1Q8CCS6 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC50.09■■■■■ 5.61
Pabpn1Q8CCS6 Gm8109-201ENSMUST00000194076 746 ntBASIC50.04■■■■■ 5.6
Pabpn1Q8CCS6 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC50.03■■■■■ 5.6
Pabpn1Q8CCS6 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC49.93■■■■■ 5.58
Pabpn1Q8CCS6 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC49.71■■■■■ 5.55
Pabpn1Q8CCS6 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC49.63■■■■■ 5.54
Pabpn1Q8CCS6 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC49.58■■■■■ 5.53
Pabpn1Q8CCS6 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC49.5■■■■■ 5.52
Pabpn1Q8CCS6 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC49.46■■■■■ 5.51
Pabpn1Q8CCS6 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC49.24■■■■■ 5.47
Pabpn1Q8CCS6 Rab21-202ENSMUST00000218831 843 ntBASIC49.17■■■■■ 5.46
Pabpn1Q8CCS6 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC49.13■■■■■ 5.46
Pabpn1Q8CCS6 Gm27325-201ENSMUST00000175467 74 ntBASIC49.09■■■■■ 5.45
Pabpn1Q8CCS6 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC49.06■■■■■ 5.44
Pabpn1Q8CCS6 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC49■■■■■ 5.43
Pabpn1Q8CCS6 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC48.88■■■■■ 5.42
Pabpn1Q8CCS6 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC48.68■■■■■ 5.38
Pabpn1Q8CCS6 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC48.67■■■■■ 5.38
Pabpn1Q8CCS6 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC48.63■■■■■ 5.38
Pabpn1Q8CCS6 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC48.61■■■■■ 5.37
Pabpn1Q8CCS6 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC48.53■■■■■ 5.36
Pabpn1Q8CCS6 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC48.51■■■■■ 5.36
Pabpn1Q8CCS6 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC48.48■■■■■ 5.35
Pabpn1Q8CCS6 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC48.33■■■■■ 5.33
Pabpn1Q8CCS6 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC48.31■■■■■ 5.32
Pabpn1Q8CCS6 Gm24804-201ENSMUST00000174982 85 ntBASIC48.28■■■■■ 5.32
Pabpn1Q8CCS6 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC48.21■■■■■ 5.31
Pabpn1Q8CCS6 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC48.18■■■■■ 5.3
Pabpn1Q8CCS6 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC48.16■■■■■ 5.3
Pabpn1Q8CCS6 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC48.15■■■■■ 5.3
Pabpn1Q8CCS6 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC48.08■■■■■ 5.29
Pabpn1Q8CCS6 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC47.95■■■■■ 5.27
Pabpn1Q8CCS6 Gm17082-201ENSMUST00000166043 1091 ntBASIC47.83■■■■■ 5.25
Pabpn1Q8CCS6 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC47.72■■■■■ 5.23
Pabpn1Q8CCS6 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC47.64■■■■■ 5.22
Pabpn1Q8CCS6 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC47.62■■■■■ 5.21
Pabpn1Q8CCS6 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC47.55■■■■■ 5.2
Pabpn1Q8CCS6 Zfp131-205ENSMUST00000223812 663 ntBASIC47.53■■■■■ 5.2
Pabpn1Q8CCS6 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC47.52■■■■■ 5.2
Pabpn1Q8CCS6 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC47.5■■■■■ 5.19
Pabpn1Q8CCS6 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC47.46■■■■■ 5.19
Pabpn1Q8CCS6 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC47.45■■■■■ 5.19
Pabpn1Q8CCS6 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC47.44■■■■■ 5.18
Pabpn1Q8CCS6 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC47.39■■■■■ 5.18
Pabpn1Q8CCS6 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC47.33■■■■■ 5.17
Pabpn1Q8CCS6 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC47.32■■■■■ 5.17
Pabpn1Q8CCS6 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC47.27■■■■■ 5.16
Pabpn1Q8CCS6 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC47.25■■■■■ 5.15
Pabpn1Q8CCS6 Gm27322-201ENSMUST00000184007 104 ntBASIC47.18■■■■■ 5.14
Pabpn1Q8CCS6 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC47.15■■■■■ 5.14
Pabpn1Q8CCS6 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC47.13■■■■■ 5.14
Pabpn1Q8CCS6 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC47.12■■■■■ 5.13
Pabpn1Q8CCS6 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC47.1■■■■■ 5.13
Pabpn1Q8CCS6 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC47.07■■■■■ 5.13
Pabpn1Q8CCS6 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC47.06■■■■■ 5.12
Pabpn1Q8CCS6 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC46.97■■■■■ 5.11
Pabpn1Q8CCS6 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC46.83■■■■■ 5.09
Pabpn1Q8CCS6 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC46.77■■■■■ 5.08
Pabpn1Q8CCS6 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC46.72■■■■■ 5.07
Pabpn1Q8CCS6 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC46.67■■■■■ 5.06
Pabpn1Q8CCS6 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC46.67■■■■■ 5.06
Pabpn1Q8CCS6 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC46.66■■■■■ 5.06
Pabpn1Q8CCS6 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC46.66■■■■■ 5.06
Pabpn1Q8CCS6 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC46.65■■■■■ 5.06
Pabpn1Q8CCS6 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC46.61■■■■■ 5.05
Pabpn1Q8CCS6 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC46.57■■■■■ 5.05
Pabpn1Q8CCS6 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC46.56■■■■■ 5.04
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms