Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 Gm25239-201ENSMUST00000174915 86 ntBASIC66.09■■■■■ 8.17
Pabpn1Q8CCS6 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC61.81■■■■■ 7.49
Pabpn1Q8CCS6 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC60.79■■■■■ 7.32
Pabpn1Q8CCS6 Gm24109-201ENSMUST00000175489 103 ntBASIC58.05■■■■■ 6.88
Pabpn1Q8CCS6 Gm15042-201ENSMUST00000120212 883 ntBASIC56.28■■■■■ 6.6
Pabpn1Q8CCS6 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC56.04■■■■■ 6.56
Pabpn1Q8CCS6 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC55.94■■■■■ 6.55
Pabpn1Q8CCS6 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC55.55■■■■■ 6.48
Pabpn1Q8CCS6 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC55.2■■■■■ 6.43
Pabpn1Q8CCS6 Gm23366-201ENSMUST00000175022 89 ntBASIC54.99■■■■■ 6.39
Pabpn1Q8CCS6 Gm15045-201ENSMUST00000117359 883 ntBASIC54.81■■■■■ 6.36
Pabpn1Q8CCS6 AC153911.1-202ENSMUST00000218534 1034 ntBASIC54.65■■■■■ 6.34
Pabpn1Q8CCS6 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC54.27■■■■■ 6.28
Pabpn1Q8CCS6 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC54.26■■■■■ 6.28
Pabpn1Q8CCS6 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC54.2■■■■■ 6.27
Pabpn1Q8CCS6 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC53.86■■■■■ 6.21
Pabpn1Q8CCS6 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC52.92■■■■■ 6.06
Pabpn1Q8CCS6 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC52.82■■■■■ 6.05
Pabpn1Q8CCS6 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC52.76■■■■■ 6.04
Pabpn1Q8CCS6 Gm25238-201ENSMUST00000174914 89 ntBASIC52.67■■■■■ 6.02
Pabpn1Q8CCS6 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC52.57■■■■■ 6.01
Pabpn1Q8CCS6 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC52.34■■■■■ 5.97
Pabpn1Q8CCS6 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC51.56■■■■■ 5.84
Pabpn1Q8CCS6 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC51.52■■■■■ 5.84
Pabpn1Q8CCS6 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC51.44■■■■■ 5.83
Pabpn1Q8CCS6 Gm25262-201ENSMUST00000174934 133 ntBASIC51.19■■■■■ 5.79
Pabpn1Q8CCS6 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC50.91■■■■■ 5.74
Pabpn1Q8CCS6 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC50.78■■■■■ 5.72
Pabpn1Q8CCS6 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC50.62■■■■■ 5.69
Pabpn1Q8CCS6 Gm26115-201ENSMUST00000175605 87 ntBASIC50.54■■■■■ 5.68
Pabpn1Q8CCS6 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC50.45■■■■■ 5.67
Pabpn1Q8CCS6 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC50.36■■■■■ 5.65
Pabpn1Q8CCS6 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC50.18■■■■■ 5.62
Pabpn1Q8CCS6 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC50.09■■■■■ 5.61
Pabpn1Q8CCS6 Gm8109-201ENSMUST00000194076 746 ntBASIC50.04■■■■■ 5.6
Pabpn1Q8CCS6 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC50.03■■■■■ 5.6
Pabpn1Q8CCS6 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC49.93■■■■■ 5.58
Pabpn1Q8CCS6 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC49.71■■■■■ 5.55
Pabpn1Q8CCS6 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC49.63■■■■■ 5.54
Pabpn1Q8CCS6 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC49.58■■■■■ 5.53
Pabpn1Q8CCS6 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC49.5■■■■■ 5.52
Pabpn1Q8CCS6 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC49.46■■■■■ 5.51
Pabpn1Q8CCS6 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC49.24■■■■■ 5.47
Pabpn1Q8CCS6 Rab21-202ENSMUST00000218831 843 ntBASIC49.17■■■■■ 5.46
Pabpn1Q8CCS6 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC49.13■■■■■ 5.46
Pabpn1Q8CCS6 Gm27325-201ENSMUST00000175467 74 ntBASIC49.09■■■■■ 5.45
Pabpn1Q8CCS6 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC49.06■■■■■ 5.44
Pabpn1Q8CCS6 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC49■■■■■ 5.43
Pabpn1Q8CCS6 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC48.88■■■■■ 5.42
Pabpn1Q8CCS6 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC48.68■■■■■ 5.38
Pabpn1Q8CCS6 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC48.67■■■■■ 5.38
Pabpn1Q8CCS6 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC48.63■■■■■ 5.38
Pabpn1Q8CCS6 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC48.61■■■■■ 5.37
Pabpn1Q8CCS6 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC48.53■■■■■ 5.36
Pabpn1Q8CCS6 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC48.51■■■■■ 5.36
Pabpn1Q8CCS6 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC48.48■■■■■ 5.35
Pabpn1Q8CCS6 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC48.33■■■■■ 5.33
Pabpn1Q8CCS6 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC48.31■■■■■ 5.32
Pabpn1Q8CCS6 Gm24804-201ENSMUST00000174982 85 ntBASIC48.28■■■■■ 5.32
Pabpn1Q8CCS6 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC48.21■■■■■ 5.31
Pabpn1Q8CCS6 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC48.18■■■■■ 5.3
Pabpn1Q8CCS6 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC48.16■■■■■ 5.3
Pabpn1Q8CCS6 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC48.15■■■■■ 5.3
Pabpn1Q8CCS6 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC48.08■■■■■ 5.29
Pabpn1Q8CCS6 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC47.95■■■■■ 5.27
Pabpn1Q8CCS6 Gm17082-201ENSMUST00000166043 1091 ntBASIC47.83■■■■■ 5.25
Pabpn1Q8CCS6 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC47.72■■■■■ 5.23
Pabpn1Q8CCS6 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC47.64■■■■■ 5.22
Pabpn1Q8CCS6 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC47.62■■■■■ 5.21
Pabpn1Q8CCS6 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC47.55■■■■■ 5.2
Pabpn1Q8CCS6 Zfp131-205ENSMUST00000223812 663 ntBASIC47.53■■■■■ 5.2
Pabpn1Q8CCS6 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC47.52■■■■■ 5.2
Pabpn1Q8CCS6 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC47.5■■■■■ 5.19
Pabpn1Q8CCS6 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC47.46■■■■■ 5.19
Pabpn1Q8CCS6 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC47.45■■■■■ 5.19
Pabpn1Q8CCS6 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC47.44■■■■■ 5.18
Pabpn1Q8CCS6 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC47.39■■■■■ 5.18
Pabpn1Q8CCS6 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC47.33■■■■■ 5.17
Pabpn1Q8CCS6 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC47.32■■■■■ 5.17
Pabpn1Q8CCS6 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC47.27■■■■■ 5.16
Pabpn1Q8CCS6 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC47.25■■■■■ 5.15
Pabpn1Q8CCS6 Gm27322-201ENSMUST00000184007 104 ntBASIC47.18■■■■■ 5.14
Pabpn1Q8CCS6 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC47.15■■■■■ 5.14
Pabpn1Q8CCS6 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC47.13■■■■■ 5.14
Pabpn1Q8CCS6 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC47.12■■■■■ 5.13
Pabpn1Q8CCS6 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC47.1■■■■■ 5.13
Pabpn1Q8CCS6 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC47.07■■■■■ 5.13
Pabpn1Q8CCS6 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC47.06■■■■■ 5.12
Pabpn1Q8CCS6 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC46.97■■■■■ 5.11
Pabpn1Q8CCS6 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC46.83■■■■■ 5.09
Pabpn1Q8CCS6 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC46.77■■■■■ 5.08
Pabpn1Q8CCS6 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC46.72■■■■■ 5.07
Pabpn1Q8CCS6 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC46.67■■■■■ 5.06
Pabpn1Q8CCS6 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC46.67■■■■■ 5.06
Pabpn1Q8CCS6 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC46.66■■■■■ 5.06
Pabpn1Q8CCS6 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC46.66■■■■■ 5.06
Pabpn1Q8CCS6 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC46.65■■■■■ 5.06
Pabpn1Q8CCS6 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC46.61■■■■■ 5.05
Pabpn1Q8CCS6 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC46.57■■■■■ 5.05
Pabpn1Q8CCS6 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC46.56■■■■■ 5.04
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms