RNA–Protein interactions for RNA: ENSMUST00000081654.12

Col18a1-202, Transcript of Collagen alpha-1(XVIII) chain, mousemouse

TSL 1 (best) BASIC

Gene Col18a1, Length 5,063 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1-202ENSMUST00000081654 Ccdc9Q8VC31 543 aaKnown RBP20.99■□□□□ 0.95
Col18a1-202ENSMUST00000081654 Cttnbp2B9EJA2 1648 aa20.98■□□□□ 0.95
Col18a1-202ENSMUST00000081654 Kif3bQ61771 747 aa20.98■□□□□ 0.95
Col18a1-202ENSMUST00000081654 Rwdd1Q9CQK7 243 aa20.97■□□□□ 0.95
Col18a1-202ENSMUST00000081654 Dhx29Q6PGC1 1365 aaKnown RBP20.95■□□□□ 0.94
Col18a1-202ENSMUST00000081654 Ppm1gQ61074 542 aa20.95■□□□□ 0.94
Col18a1-202ENSMUST00000081654 Ccnb3Q810T2 1396 aa20.94■□□□□ 0.94
Col18a1-202ENSMUST00000081654 Psme1P97371 249 aa20.94■□□□□ 0.94
Col18a1-202ENSMUST00000081654 Znf326O88291 580 aa20.92■□□□□ 0.94
Col18a1-202ENSMUST00000081654 UacaQ8CGB3 1411 aa20.92■□□□□ 0.94
Col18a1-202ENSMUST00000081654 Htatsf1Q8BGC0 757 aa20.92■□□□□ 0.94
Col18a1-202ENSMUST00000081654 Rock2P70336 1388 aa20.92■□□□□ 0.94
Col18a1-202ENSMUST00000081654 Sin3aQ60520 1274 aaKnown RBP20.92■□□□□ 0.94
Col18a1-202ENSMUST00000081654 Sart1Q9Z315 806 aaKnown RBP20.92■□□□□ 0.94
Col18a1-202ENSMUST00000081654 Rtf1A2AQ19 715 aaKnown RBP20.91■□□□□ 0.94
Col18a1-202ENSMUST00000081654 Zscan21Q07231 555 aa20.91■□□□□ 0.94
Col18a1-202ENSMUST00000081654 Exoc6Q8R313 802 aa20.9■□□□□ 0.94
Col18a1-202ENSMUST00000081654 Txndc2Q6P902 515 aa20.89■□□□□ 0.94
Col18a1-202ENSMUST00000081654 Trim44Q9QXA7 346 aa20.89■□□□□ 0.94
Col18a1-202ENSMUST00000081654 Srcin1Q9QWI6 1250 aa20.89■□□□□ 0.93
Col18a1-202ENSMUST00000081654 Rtn4Q99P72 1162 aaKnown RBP20.88■□□□□ 0.93
Col18a1-202ENSMUST00000081654 Speer4f1Q9D5Q6 258 aa20.88■□□□□ 0.93
Col18a1-202ENSMUST00000081654 Stard8Q8K031 1019 aa20.88■□□□□ 0.93
Col18a1-202ENSMUST00000081654 HnrnpuQ8VEK3 800 aaKnown RBP20.87■□□□□ 0.93
Col18a1-202ENSMUST00000081654 KnstrnQ9D9Z1 312 aaKnown RBP20.86■□□□□ 0.93
Col18a1-202ENSMUST00000081654 Dbr1Q923B1 550 aa20.85■□□□□ 0.93
Col18a1-202ENSMUST00000081654 Armcx1Q9CX83 456 aa20.85■□□□□ 0.93
Col18a1-202ENSMUST00000081654 U2af1Q9D883 239 aaKnown RBP20.85■□□□□ 0.93
Col18a1-202ENSMUST00000081654 Dcaf11Q91VU6 549 aa20.84■□□□□ 0.93
Col18a1-202ENSMUST00000081654 Mak16Q8BGS0 296 aaKnown RBP20.84■□□□□ 0.93
Col18a1-202ENSMUST00000081654 Iqgap2Q3UQ44 1575 aa20.83■□□□□ 0.92
Col18a1-202ENSMUST00000081654 Plcb2A3KGF7 1181 aa20.82■□□□□ 0.92
Col18a1-202ENSMUST00000081654 PtmaP26350 111 aa20.81■□□□□ 0.92
Col18a1-202ENSMUST00000081654 Hsp90b1P08113 802 aaKnown RBP20.81■□□□□ 0.92
Col18a1-202ENSMUST00000081654 WrnO09053 1401 aa20.81■□□□□ 0.92
Col18a1-202ENSMUST00000081654 1700123L14RikQ3V2K7 440 aa20.8■□□□□ 0.92
Col18a1-202ENSMUST00000081654 Golga2Q921M4 999 aa20.8■□□□□ 0.92
Col18a1-202ENSMUST00000081654 Fam71e1A1L3C1 212 aa20.8■□□□□ 0.92
Col18a1-202ENSMUST00000081654 U2surpQ6NV83 1029 aaKnown RBP20.79■□□□□ 0.92
Col18a1-202ENSMUST00000081654 Pes1Q9EQ61 584 aaKnown RBP20.79■□□□□ 0.92
Col18a1-202ENSMUST00000081654 Birc3O08863 600 aa20.79■□□□□ 0.92
Col18a1-202ENSMUST00000081654 Eif4g2Q62448 906 aaKnown RBP20.79■□□□□ 0.92
Col18a1-202ENSMUST00000081654 B4galnt3Q6L8S8 986 aa20.78■□□□□ 0.92
Col18a1-202ENSMUST00000081654 CatipB9EKE5 520 aa20.78■□□□□ 0.92
Col18a1-202ENSMUST00000081654 HdgfP51859 237 aaKnown RBP20.76■□□□□ 0.91
Col18a1-202ENSMUST00000081654 CenpjQ569L8 1344 aa20.76■□□□□ 0.91
Col18a1-202ENSMUST00000081654 Sart3Q9JLI8 962 aaKnown RBP20.76■□□□□ 0.91
Col18a1-202ENSMUST00000081654 MccE9PWI3 1003 aa20.74■□□□□ 0.91
Col18a1-202ENSMUST00000081654 MlecQ6ZQI3 291 aaKnown RBP20.74■□□□□ 0.91
Col18a1-202ENSMUST00000081654 Plin1Q8CGN5 517 aa20.73■□□□□ 0.91
Col18a1-202ENSMUST00000081654 Ncoa2Q61026 1462 aa20.73■□□□□ 0.91
Col18a1-202ENSMUST00000081654 Ythdc1E9Q5K9 736 aaKnown RBP20.72■□□□□ 0.91
Col18a1-202ENSMUST00000081654 Fan1Q69ZT1 1020 aa20.72■□□□□ 0.91
Col18a1-202ENSMUST00000081654 Pabpn1Q8CCS6 302 aaKnown RBP20.72■□□□□ 0.91
Col18a1-202ENSMUST00000081654 Tcerg1Q8CGF7 1100 aaKnown RBP20.72■□□□□ 0.91
Col18a1-202ENSMUST00000081654 Sox12Q04890 314 aa20.72■□□□□ 0.91
Col18a1-202ENSMUST00000081654 Slc4a1apE9PX68 744 aa20.71■□□□□ 0.91
Col18a1-202ENSMUST00000081654 Jph4Q80WT0 628 aa20.71■□□□□ 0.91
Col18a1-202ENSMUST00000081654 Soga1E1U8D0 1418 aa20.71■□□□□ 0.91
Col18a1-202ENSMUST00000081654 Ccdc27Q3V036 639 aa20.7■□□□□ 0.9
Col18a1-202ENSMUST00000081654 Usp47Q8BY87 1376 aa20.7■□□□□ 0.9
Col18a1-202ENSMUST00000081654 Spag9Q58A65 1321 aaKnown RBP20.7■□□□□ 0.9
Col18a1-202ENSMUST00000081654 Q3TQI7 289 aaKnown RBP20.7■□□□□ 0.9
Col18a1-202ENSMUST00000081654 Chmp5Q9D7S9 219 aa20.69■□□□□ 0.9
Col18a1-202ENSMUST00000081654 Ggt6Q6PDE7 497 aa20.69■□□□□ 0.9
Col18a1-202ENSMUST00000081654 Utp14aQ640M1 767 aaKnown RBP20.69■□□□□ 0.9
Col18a1-202ENSMUST00000081654 Znf316Q6PGE4 1016 aa20.69■□□□□ 0.9
Col18a1-202ENSMUST00000081654 PnnO35691 725 aaKnown RBP20.68■□□□□ 0.9
Col18a1-202ENSMUST00000081654 Pde3bQ61409 1100 aa20.68■□□□□ 0.9
Col18a1-202ENSMUST00000081654 Tmco5bQ80X59 307 aa20.68■□□□□ 0.9
Col18a1-202ENSMUST00000081654 Cc2d2bA0A286YDU8 1405 aa20.67■□□□□ 0.9
Col18a1-202ENSMUST00000081654 Efcab5A0JP43 1406 aa20.67■□□□□ 0.9
Col18a1-202ENSMUST00000081654 Casc1Q6TDU8 730 aa20.64■□□□□ 0.89
Col18a1-202ENSMUST00000081654 Supt16hQ920B9 1047 aa20.64■□□□□ 0.89
Col18a1-202ENSMUST00000081654 Sh3bp5Q9Z131 463 aa20.64■□□□□ 0.89
Col18a1-202ENSMUST00000081654 EspnQ9ET47 871 aa20.62■□□□□ 0.89
Col18a1-202ENSMUST00000081654 SafbD3YXK2 937 aaKnown RBP20.61■□□□□ 0.89
Col18a1-202ENSMUST00000081654 Slc4a3P16283 1227 aa20.61■□□□□ 0.89
Col18a1-202ENSMUST00000081654 Shroom4Q1W617 1475 aa20.61■□□□□ 0.89
Col18a1-202ENSMUST00000081654 Ap3b2Q9JME5 1082 aa20.61■□□□□ 0.89
Col18a1-202ENSMUST00000081654 Tdrd9Q14BI7 1383 aa20.6■□□□□ 0.89
Col18a1-202ENSMUST00000081654 Cux1P53564 1515 aa20.6■□□□□ 0.89
Col18a1-202ENSMUST00000081654 Ccar1Q8CH18 1146 aaKnown RBP20.6■□□□□ 0.89
Col18a1-202ENSMUST00000081654 Clstn1Q9EPL2 979 aa20.6■□□□□ 0.89
Col18a1-202ENSMUST00000081654 Nol10Q5RJG1 687 aaKnown RBP20.59■□□□□ 0.89
Col18a1-202ENSMUST00000081654 Polr1aO35134 1717 aaKnown RBP20.59■□□□□ 0.89
Col18a1-202ENSMUST00000081654 CrbnQ8C7D2 445 aa20.58■□□□□ 0.88
Col18a1-202ENSMUST00000081654 Pank3Q8R2W9 370 aa20.57■□□□□ 0.88
Col18a1-202ENSMUST00000081654 Tnnt1O88346 262 aa20.57■□□□□ 0.88
Col18a1-202ENSMUST00000081654 Ksr2Q3UVC0 959 aa20.56■□□□□ 0.88
Col18a1-202ENSMUST00000081654 PtmsQ9D0J8 101 aaKnown RBP20.56■□□□□ 0.88
Col18a1-202ENSMUST00000081654 Ecm2Q5FW85 670 aa20.55■□□□□ 0.88
Col18a1-202ENSMUST00000081654 Rassf8Q8CJ96 419 aa20.55■□□□□ 0.88
Col18a1-202ENSMUST00000081654 Usp40Q8BWR4 1235 aa20.54■□□□□ 0.88
Col18a1-202ENSMUST00000081654 Top2aQ01320 1528 aaKnown RBP20.54■□□□□ 0.88
Col18a1-202ENSMUST00000081654 Lmod3E9QA62 571 aa20.53■□□□□ 0.88
Col18a1-202ENSMUST00000081654 Shq1Q7TMX5 569 aa20.53■□□□□ 0.88
Col18a1-202ENSMUST00000081654 Tsen2Q6P7W5 460 aa20.53■□□□□ 0.88
Col18a1-202ENSMUST00000081654 Znf330Q922H9 316 aa20.52■□□□□ 0.88
Col18a1-202ENSMUST00000081654 Nsd2Q8BVE8 1365 aa20.51■□□□□ 0.87
Retrieved 100 of 22,080 RNA–protein pairs in 10.4 ms