RNA–Protein interactions for RNA: ENSMUST00000081654.12

Col18a1-202, Transcript of Collagen alpha-1(XVIII) chain, mousemouse

TSL 1 (best) BASIC

Gene Col18a1, Length 5,063 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1-202ENSMUST00000081654 Rhox8Q6VSS7 320 aa29.28■■■□□ 2.28
Col18a1-202ENSMUST00000081654 Rpgrip1Q9EPQ2 1331 aa26.16■■□□□ 1.78
Col18a1-202ENSMUST00000081654 NischQ80TM9 1593 aa26.12■■□□□ 1.77
Col18a1-202ENSMUST00000081654 Ccdc136Q3TVA9 1136 aa26.03■■□□□ 1.76
Col18a1-202ENSMUST00000081654 Esf1Q3V1V3 845 aaKnown RBP25.95■■□□□ 1.74
Col18a1-202ENSMUST00000081654 Cngb1E1AZ71 1325 aa25.82■■□□□ 1.72
Col18a1-202ENSMUST00000081654 Ehmt2Q9Z148 1263 aaKnown RBP25.72■■□□□ 1.71
Col18a1-202ENSMUST00000081654 Trim41Q5NCC3 630 aa25.67■■□□□ 1.7
Col18a1-202ENSMUST00000081654 Zeb1Q64318 1117 aa25.35■■□□□ 1.65
Col18a1-202ENSMUST00000081654 Gab3Q8BSM5 595 aa25.34■■□□□ 1.65
Col18a1-202ENSMUST00000081654 Npm2Q80W85 207 aa25.29■■□□□ 1.64
Col18a1-202ENSMUST00000081654 Las1lA2BE28 776 aaKnown RBP25.22■■□□□ 1.63
Col18a1-202ENSMUST00000081654 Ube2uB1AUC4 352 aa25.16■■□□□ 1.62
Col18a1-202ENSMUST00000081654 Wdr66E9Q743 1299 aa25.06■■□□□ 1.6
Col18a1-202ENSMUST00000081654 Myt1lP97500 1187 aa24.99■■□□□ 1.59
Col18a1-202ENSMUST00000081654 Ccdc180J3QNE4 1664 aa24.44■■□□□ 1.5
Col18a1-202ENSMUST00000081654 Abcc9P70170 1546 aa24.42■■□□□ 1.5
Col18a1-202ENSMUST00000081654 HrcG5E8J6 738 aa24.4■■□□□ 1.5
Col18a1-202ENSMUST00000081654 UbtfP25976 765 aaKnown RBP24.36■■□□□ 1.49
Col18a1-202ENSMUST00000081654 NefmP08553 848 aa24.35■■□□□ 1.49
Col18a1-202ENSMUST00000081654 Il27Q8K3I6 234 aa24.33■■□□□ 1.49
Col18a1-202ENSMUST00000081654 Pelp1Q9DBD5 1123 aaKnown RBP24.32■■□□□ 1.48
Col18a1-202ENSMUST00000081654 Zcchc6Q5BLK4 1491 aaKnown RBP24.32■■□□□ 1.48
Col18a1-202ENSMUST00000081654 Acin1Q9JIX8 1338 aaKnown RBP24.32■■□□□ 1.48
Col18a1-202ENSMUST00000081654 Rtl1Q7M732 1744 aa24.23■■□□□ 1.47
Col18a1-202ENSMUST00000081654 Gm35339A0A140LHH9 1649 aa24.05■■□□□ 1.44
Col18a1-202ENSMUST00000081654 Stra8P70278 393 aa23.96■■□□□ 1.43
Col18a1-202ENSMUST00000081654 Abcc8B2RUS7 1588 aa23.85■■□□□ 1.41
Col18a1-202ENSMUST00000081654 Ap3b1Q9Z1T1 1105 aa23.76■■□□□ 1.39
Col18a1-202ENSMUST00000081654 Fam50aQ9WV03 339 aaKnown RBP23.72■■□□□ 1.39
Col18a1-202ENSMUST00000081654 Slc24a1Q91WD8 1130 aa23.67■■□□□ 1.38
Col18a1-202ENSMUST00000081654 CenpbP27790 599 aa23.61■■□□□ 1.37
Col18a1-202ENSMUST00000081654 Npm1Q61937 292 aaKnown RBP23.54■■□□□ 1.36
Col18a1-202ENSMUST00000081654 Anp32bQ9EST5 272 aaKnown RBP23.5■■□□□ 1.35
Col18a1-202ENSMUST00000081654 NclP09405 707 aaKnown RBP23.47■■□□□ 1.35
Col18a1-202ENSMUST00000081654 Neurod1Q60867 357 aa23.44■■□□□ 1.34
Col18a1-202ENSMUST00000081654 Cdk11bP24788 784 aaKnown RBP23.43■■□□□ 1.34
Col18a1-202ENSMUST00000081654 NrdcQ8BHG1 1161 aa23.39■■□□□ 1.33
Col18a1-202ENSMUST00000081654 Os9Q8K2C7 672 aa23.36■■□□□ 1.33
Col18a1-202ENSMUST00000081654 TonslQ6NZL6 1363 aa23.27■■□□□ 1.32
Col18a1-202ENSMUST00000081654 Brd4Q9ESU6 1400 aaKnown RBP23.25■■□□□ 1.31
Col18a1-202ENSMUST00000081654 Pcgf6Q99NA9 353 aa23.19■■□□□ 1.3
Col18a1-202ENSMUST00000081654 Nop58Q6DFW4 536 aaKnown RBP23.18■■□□□ 1.3
Col18a1-202ENSMUST00000081654 Tnnt3Q9QZ47 272 aa23.17■■□□□ 1.3
Col18a1-202ENSMUST00000081654 Lmod2Q3UHZ5 550 aa23.15■■□□□ 1.3
Col18a1-202ENSMUST00000081654 Mier1Q5UAK0 511 aa23.14■■□□□ 1.3
Col18a1-202ENSMUST00000081654 Plekhg3Q4VAC9 1341 aa23.07■■□□□ 1.28
Col18a1-202ENSMUST00000081654 NeflP08551 543 aa23.07■■□□□ 1.28
Col18a1-202ENSMUST00000081654 Rb1cc1Q9ESK9 1588 aa23■■□□□ 1.27
Col18a1-202ENSMUST00000081654 Ppargc1bQ8VHJ7 1014 aa22.99■■□□□ 1.27
Col18a1-202ENSMUST00000081654 Zbtb7cQ8VCZ7 619 aa22.95■■□□□ 1.26
Col18a1-202ENSMUST00000081654 Eif5bQ05D44 1216 aaKnown RBP22.95■■□□□ 1.26
Col18a1-202ENSMUST00000081654 Amer1Q7TS75 1132 aa22.93■■□□□ 1.26
Col18a1-202ENSMUST00000081654 Hnrnpul2Q00PI9 745 aaKnown RBP22.93■■□□□ 1.26
Col18a1-202ENSMUST00000081654 Supt5hO55201 1082 aaKnown RBP22.87■■□□□ 1.25
Col18a1-202ENSMUST00000081654 Cep164Q5DU05 1446 aa22.86■■□□□ 1.25
Col18a1-202ENSMUST00000081654 Ifnlr1Q8CGK5 535 aa22.84■■□□□ 1.25
Col18a1-202ENSMUST00000081654 Ubl4bQ9CQ84 188 aa22.83■■□□□ 1.25
Col18a1-202ENSMUST00000081654 Gm13697A2AK42 830 aa22.82■■□□□ 1.24
Col18a1-202ENSMUST00000081654 Clip1Q922J3 1391 aa22.82■■□□□ 1.24
Col18a1-202ENSMUST00000081654 Dcaf1Q80TR8 1506 aa22.8■■□□□ 1.24
Col18a1-202ENSMUST00000081654 Chic1Q8CBW7 227 aa22.78■■□□□ 1.24
Col18a1-202ENSMUST00000081654 NacadQ5SWP3 1504 aa22.77■■□□□ 1.24
Col18a1-202ENSMUST00000081654 Hdac5Q9Z2V6 1113 aa22.73■■□□□ 1.23
Col18a1-202ENSMUST00000081654 ClspnQ80YR7 1315 aa22.7■■□□□ 1.22
Col18a1-202ENSMUST00000081654 Fkbp15Q6P9Q6 1216 aaKnown RBP22.67■■□□□ 1.22
Col18a1-202ENSMUST00000081654 Erich6D3Z6S9 713 aa22.65■■□□□ 1.22
Col18a1-202ENSMUST00000081654 Ccer2J3QPU5 274 aa22.61■■□□□ 1.21
Col18a1-202ENSMUST00000081654 Atp1b4Q99ME6 356 aa22.56■■□□□ 1.2
Col18a1-202ENSMUST00000081654 4933416C03RikQ3V063 378 aa22.52■■□□□ 1.2
Col18a1-202ENSMUST00000081654 Eid3Q3V124 375 aa22.52■■□□□ 1.2
Col18a1-202ENSMUST00000081654 Zbtb4Q5F293 982 aa22.5■■□□□ 1.19
Col18a1-202ENSMUST00000081654 Baz1aO88379 1555 aa22.47■■□□□ 1.19
Col18a1-202ENSMUST00000081654 Nlrp6Q91WS2 869 aa22.46■■□□□ 1.19
Col18a1-202ENSMUST00000081654 Myt1Q8CFC2 1127 aa22.44■■□□□ 1.18
Col18a1-202ENSMUST00000081654 Gm13695A2AK44 830 aa22.43■■□□□ 1.18
Col18a1-202ENSMUST00000081654 Ttbk1Q6PCN3 1308 aa22.43■■□□□ 1.18
Col18a1-202ENSMUST00000081654 Rsf1E9PWW9 1441 aaKnown RBP22.36■■□□□ 1.17
Col18a1-202ENSMUST00000081654 BlmO88700 1416 aa22.35■■□□□ 1.17
Col18a1-202ENSMUST00000081654 Golga3P55937 1487 aa22.32■■□□□ 1.16
Col18a1-202ENSMUST00000081654 Kif15Q6P9L6 1387 aa22.31■■□□□ 1.16
Col18a1-202ENSMUST00000081654 Rtl5Q5DTT4 599 aa22.31■■□□□ 1.16
Col18a1-202ENSMUST00000081654 Clstn2Q9ER65 966 aa22.3■■□□□ 1.16
Col18a1-202ENSMUST00000081654 Chic2Q9D9G3 165 aa22.29■■□□□ 1.16
Col18a1-202ENSMUST00000081654 Ercc6F8VPZ5 1481 aa22.29■■□□□ 1.16
Col18a1-202ENSMUST00000081654 Mapk8ip2Q9ERE9 830 aa22.28■■□□□ 1.16
Col18a1-202ENSMUST00000081654 Setd5Q5XJV7 1441 aa22.28■■□□□ 1.16
Col18a1-202ENSMUST00000081654 Prdm10Q3UTQ7 1184 aa22.27■■□□□ 1.16
Col18a1-202ENSMUST00000081654 4930567H17RikQ3V0K5 233 aa22.19■■□□□ 1.14
Col18a1-202ENSMUST00000081654 Ccdc18Q640L5 1455 aa22.18■■□□□ 1.14
Col18a1-202ENSMUST00000081654 Plppr3Q7TPB0 716 aa22.17■■□□□ 1.14
Col18a1-202ENSMUST00000081654 Anp32aO35381 247 aa22.16■■□□□ 1.14
Col18a1-202ENSMUST00000081654 Sall2Q9QX96 1004 aa22.14■■□□□ 1.14
Col18a1-202ENSMUST00000081654 Polr3glQ8R0C0 218 aa22.14■■□□□ 1.13
Col18a1-202ENSMUST00000081654 Kdm5dQ62240 1548 aa22.13■■□□□ 1.13
Col18a1-202ENSMUST00000081654 Eea1Q8BL66 1411 aa22.02■■□□□ 1.12
Col18a1-202ENSMUST00000081654 Safb2Q80YR5 991 aaKnown RBP22■■□□□ 1.11
Col18a1-202ENSMUST00000081654 Upf2A2AT37 1269 aaKnown RBP21.98■■□□□ 1.11
Col18a1-202ENSMUST00000081654 Arhgap27A2AB59 869 aa21.93■■□□□ 1.1
Col18a1-202ENSMUST00000081654 Mrs2Q5NCE8 434 aa21.89■■□□□ 1.09
Retrieved 100 of 22,080 RNA–protein pairs in 12.5 ms