RNA–Protein interactions for RNA: ENSMUST00000033088.7

Rnf40-201, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

TSL 5 BASIC

Gene Rnf40, Length 3,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-201ENSMUST00000033088 DekQ7TNV0 380 aaKnown RBP14.22□□□□□ -0.13
Rnf40-201ENSMUST00000033088 Ankrd26Q811D2 1581 aa14.22□□□□□ -0.13
Rnf40-201ENSMUST00000033088 Rpap1Q80TE0 1409 aa14.22□□□□□ -0.13
Rnf40-201ENSMUST00000033088 Erich3F6QRE9 1637 aa14.21□□□□□ -0.13
Rnf40-201ENSMUST00000033088 Ift140E9PY46 1464 aa14.21□□□□□ -0.13
Rnf40-201ENSMUST00000033088 Arhgef5E9Q7D5 1581 aa14.21□□□□□ -0.13
Rnf40-201ENSMUST00000033088 Znf710Q3U288 666 aa14.21□□□□□ -0.13
Rnf40-201ENSMUST00000033088 IbspQ61711 324 aa14.21□□□□□ -0.14
Rnf40-201ENSMUST00000033088 Fyco1Q8VDC1 1437 aa14.2□□□□□ -0.14
Rnf40-201ENSMUST00000033088 Disp1Q3TDN0 1521 aa14.2□□□□□ -0.14
Rnf40-201ENSMUST00000033088 Cux1P53564 1515 aa14.19□□□□□ -0.14
Rnf40-201ENSMUST00000033088 Grin2aP35436 1464 aa14.19□□□□□ -0.14
Rnf40-201ENSMUST00000033088 Lrriq1Q0P5X1 1673 aa14.18□□□□□ -0.14
Rnf40-201ENSMUST00000033088 Magi3Q9EQJ9 1476 aa14.18□□□□□ -0.14
Rnf40-201ENSMUST00000033088 Pla2r1Q62028 1487 aa14.18□□□□□ -0.14
Rnf40-201ENSMUST00000033088 Hsp90ab1P11499 724 aaKnown RBP14.17□□□□□ -0.14
Rnf40-201ENSMUST00000033088 Neurod2Q62414 383 aa14.17□□□□□ -0.14
Rnf40-201ENSMUST00000033088 Ccer2J3QPU5 274 aa14.17□□□□□ -0.14
Rnf40-201ENSMUST00000033088 Nlrp6Q91WS2 869 aa14.17□□□□□ -0.14
Rnf40-201ENSMUST00000033088 Kcnh8P59111 1102 aa14.16□□□□□ -0.14
Rnf40-201ENSMUST00000033088 EprsQ8CGC7 1512 aaKnown RBP14.16□□□□□ -0.14
Rnf40-201ENSMUST00000033088 Pknox2Q8BG99 474 aa14.16□□□□□ -0.14
Rnf40-201ENSMUST00000033088 Pbrm1Q8BSQ9 1634 aaKnown RBP14.14□□□□□ -0.15
Rnf40-201ENSMUST00000033088 Tiam1Q60610 1591 aa14.13□□□□□ -0.15
Rnf40-201ENSMUST00000033088 Pcf11G3X9Z4 1553 aa14.13□□□□□ -0.15
Rnf40-201ENSMUST00000033088 CntlnA2AM05 1397 aa14.13□□□□□ -0.15
Rnf40-201ENSMUST00000033088 Lmo7E9PYF4 1699 aaKnown RBP14.11□□□□□ -0.15
Rnf40-201ENSMUST00000033088 Nup160Q9Z0W3 1402 aaKnown RBP14.11□□□□□ -0.15
Rnf40-201ENSMUST00000033088 Naip1Q9QWK5 1403 aa14.11□□□□□ -0.15
Rnf40-201ENSMUST00000033088 Aebp1Q640N1 1128 aa14.09□□□□□ -0.15
Rnf40-201ENSMUST00000033088 Tcerg1Q8CGF7 1100 aaKnown RBP14.09□□□□□ -0.15
Rnf40-201ENSMUST00000033088 CadpsQ80TJ1 1355 aa14.08□□□□□ -0.15
Rnf40-201ENSMUST00000033088 Cc2d2bA0A286YDU8 1405 aa14.08□□□□□ -0.16
Rnf40-201ENSMUST00000033088 Ipo9Q91YE6 1041 aa14.08□□□□□ -0.16
Rnf40-201ENSMUST00000033088 Gm7298A0A0N4SVU1 1476 aa14.07□□□□□ -0.16
Rnf40-201ENSMUST00000033088 Plcb2A3KGF7 1181 aa14.06□□□□□ -0.16
Rnf40-201ENSMUST00000033088 Ccdc9Q8VC31 543 aaKnown RBP14.06□□□□□ -0.16
Rnf40-201ENSMUST00000033088 Adamts12Q811B3 1600 aa14.06□□□□□ -0.16
Rnf40-201ENSMUST00000033088 Gpatch8A2A6A1 1505 aa14.05□□□□□ -0.16
Rnf40-201ENSMUST00000033088 Dnttip2Q8R2M2 758 aaKnown RBP14.05□□□□□ -0.16
Rnf40-201ENSMUST00000033088 Setd1bQ8CFT2 1985 aa14.05□□□□□ -0.16
Rnf40-201ENSMUST00000033088 Gm13697A2AK42 830 aa14.05□□□□□ -0.16
Rnf40-201ENSMUST00000033088 WizO88286 1684 aaKnown RBP14.04□□□□□ -0.16
Rnf40-201ENSMUST00000033088 TchhA0A0B4J1F9 1599 aa14.04□□□□□ -0.16
Rnf40-201ENSMUST00000033088 Abca5Q8K448 1642 aa14.03□□□□□ -0.16
Rnf40-201ENSMUST00000033088 Slx4Q6P1D7 1565 aa14.03□□□□□ -0.16
Rnf40-201ENSMUST00000033088 Peg3Q3URU2 1571 aa14.02□□□□□ -0.17
Rnf40-201ENSMUST00000033088 Soga1E1U8D0 1418 aa14.02□□□□□ -0.17
Rnf40-201ENSMUST00000033088 Chmp5Q9D7S9 219 aa13.99□□□□□ -0.17
Rnf40-201ENSMUST00000033088 Sart3Q9JLI8 962 aaKnown RBP13.99□□□□□ -0.17
Rnf40-201ENSMUST00000033088 Trim44Q9QXA7 346 aa13.99□□□□□ -0.17
Rnf40-201ENSMUST00000033088 Eif4g3Q80XI3 1579 aaKnown RBP13.98□□□□□ -0.17
Rnf40-201ENSMUST00000033088 Rusc2Q80U22 1514 aa13.98□□□□□ -0.17
Rnf40-201ENSMUST00000033088 Ncapd3Q6ZQK0 1506 aa13.98□□□□□ -0.17
Rnf40-201ENSMUST00000033088 PxdnQ3UQ28 1475 aa13.98□□□□□ -0.17
Rnf40-201ENSMUST00000033088 Gm6268A2A3U9 297 aa13.98□□□□□ -0.17
Rnf40-201ENSMUST00000033088 Senp3Q9EP97 568 aaKnown RBP13.97□□□□□ -0.17
Rnf40-201ENSMUST00000033088 Arhgap27A2AB59 869 aa13.97□□□□□ -0.17
Rnf40-201ENSMUST00000033088 Kif27Q7M6Z4 1394 aa13.97□□□□□ -0.17
Rnf40-201ENSMUST00000033088 Abca16E9PWJ7 1678 aa13.97□□□□□ -0.17
Rnf40-201ENSMUST00000033088 Dnai1Q8C0M8 701 aa13.96□□□□□ -0.18
Rnf40-201ENSMUST00000033088 Card11Q8CIS0 1159 aa13.93□□□□□ -0.18
Rnf40-201ENSMUST00000033088 Gm1043A0A140LJC2 1431 aa13.93□□□□□ -0.18
Rnf40-201ENSMUST00000033088 WrnO09053 1401 aa13.93□□□□□ -0.18
Rnf40-201ENSMUST00000033088 Kdm2aP59997 1161 aa13.93□□□□□ -0.18
Rnf40-201ENSMUST00000033088 AU015836B2RUM3 263 aa13.9□□□□□ -0.18
Rnf40-201ENSMUST00000033088 Atp1b4Q99ME6 356 aa13.9□□□□□ -0.18
Rnf40-201ENSMUST00000033088 Cluap1Q8R3P7 413 aa13.89□□□□□ -0.19
Rnf40-201ENSMUST00000033088 CrbnQ8C7D2 445 aa13.88□□□□□ -0.19
Rnf40-201ENSMUST00000033088 Abcc2Q8VI47 1543 aa13.88□□□□□ -0.19
Rnf40-201ENSMUST00000033088 Shroom2A2ALU4 1481 aa13.87□□□□□ -0.19
Rnf40-201ENSMUST00000033088 Ppm1gQ61074 542 aa13.87□□□□□ -0.19
Rnf40-201ENSMUST00000033088 Eif2s2Q99L45 331 aaKnown RBP13.87□□□□□ -0.19
Rnf40-201ENSMUST00000033088 Smg6P61406 1418 aaKnown RBP13.87□□□□□ -0.19
Rnf40-201ENSMUST00000033088 SlkO54988 1233 aa13.86□□□□□ -0.19
Rnf40-201ENSMUST00000033088 Slc4a2P13808 1237 aaKnown RBP13.86□□□□□ -0.19
Rnf40-201ENSMUST00000033088 Ubap1lG3UW59 384 aa13.85□□□□□ -0.19
Rnf40-201ENSMUST00000033088 Rundc1Q0VDN7 615 aa13.85□□□□□ -0.19
Rnf40-201ENSMUST00000033088 Pkd2O35245 966 aa13.84□□□□□ -0.19
Rnf40-201ENSMUST00000033088 Cnga1P29974 684 aa13.84□□□□□ -0.19
Rnf40-201ENSMUST00000033088 PtmaP26350 111 aa13.84□□□□□ -0.19
Rnf40-201ENSMUST00000033088 Fgd6Q69ZL1 1399 aa13.83□□□□□ -0.19
Rnf40-201ENSMUST00000033088 Erich6bQ9D4S6 220 aa13.83□□□□□ -0.2
Rnf40-201ENSMUST00000033088 Ccnb3Q810T2 1396 aa13.83□□□□□ -0.2
Rnf40-201ENSMUST00000033088 Map3k4O08648 1597 aa13.82□□□□□ -0.2
Rnf40-201ENSMUST00000033088 Rapgef6Q5NCJ1 1609 aa13.82□□□□□ -0.2
Rnf40-201ENSMUST00000033088 Lmtk2Q3TYD6 1471 aa13.82□□□□□ -0.2
Rnf40-201ENSMUST00000033088 3425401B19RikD3Z1D3 1412 aa13.81□□□□□ -0.2
Rnf40-201ENSMUST00000033088 Htatsf1Q8BGC0 757 aa13.8□□□□□ -0.2
Rnf40-201ENSMUST00000033088 Iqcf3Q9D498 203 aa13.8□□□□□ -0.2
Rnf40-201ENSMUST00000033088 BC005561E9Q5E2 1589 aa13.8□□□□□ -0.2
Rnf40-201ENSMUST00000033088 AknaQ80VW7 1404 aa13.79□□□□□ -0.2
Rnf40-201ENSMUST00000033088 Znf330Q922H9 316 aa13.79□□□□□ -0.2
Rnf40-201ENSMUST00000033088 Rrp7aQ9D1C9 280 aaKnown RBP13.79□□□□□ -0.2
Rnf40-201ENSMUST00000033088 Dnmt1P13864 1620 aaKnown RBP13.79□□□□□ -0.2
Rnf40-201ENSMUST00000033088 Speer4f1Q9D5Q6 258 aa13.79□□□□□ -0.2
Rnf40-201ENSMUST00000033088 NexmifQ5DTT1 1515 aa13.79□□□□□ -0.2
Rnf40-201ENSMUST00000033088 Arhgap31A6X8Z5 1425 aa13.79□□□□□ -0.2
Rnf40-201ENSMUST00000033088 Ncoa2Q61026 1462 aa13.78□□□□□ -0.2
Rnf40-201ENSMUST00000033088 Mug1P28665 1476 aa13.78□□□□□ -0.2
Retrieved 100 of 22,080 RNA–protein pairs in 58.1 ms