Protein–RNA interactions for Protein: A0A140LJC2

Gm1043, Predicted gene 1043, mousemouse

Predictions only

Length 1,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm1043A0A140LJC2 Gm25239-201ENSMUST00000174915 86 ntBASIC60.14■■■■■ 7.22
Gm1043A0A140LJC2 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC55.72■■■■■ 6.51
Gm1043A0A140LJC2 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC54.65■■■■■ 6.34
Gm1043A0A140LJC2 Gm15042-201ENSMUST00000120212 883 ntBASIC52.45■■■■■ 5.99
Gm1043A0A140LJC2 Gm24109-201ENSMUST00000175489 103 ntBASIC52.37■■■■■ 5.97
Gm1043A0A140LJC2 Gm15045-201ENSMUST00000117359 883 ntBASIC51.48■■■■■ 5.83
Gm1043A0A140LJC2 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC50.99■■■■■ 5.75
Gm1043A0A140LJC2 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC50.79■■■■■ 5.72
Gm1043A0A140LJC2 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC50.69■■■■■ 5.71
Gm1043A0A140LJC2 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC50.11■■■■■ 5.61
Gm1043A0A140LJC2 Gm23366-201ENSMUST00000175022 89 ntBASIC50.1■■■■■ 5.61
Gm1043A0A140LJC2 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC50.09■■■■■ 5.61
Gm1043A0A140LJC2 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC50.02■■■■■ 5.6
Gm1043A0A140LJC2 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC49.28■■■■■ 5.48
Gm1043A0A140LJC2 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC48.87■■■■■ 5.41
Gm1043A0A140LJC2 AC153911.1-202ENSMUST00000218534 1034 ntBASIC48.66■■■■■ 5.38
Gm1043A0A140LJC2 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC48.41■■■■■ 5.34
Gm1043A0A140LJC2 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC48.34■■■■■ 5.33
Gm1043A0A140LJC2 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC48.26■■■■■ 5.32
Gm1043A0A140LJC2 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC48.24■■■■■ 5.31
Gm1043A0A140LJC2 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC48.21■■■■■ 5.31
Gm1043A0A140LJC2 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC48.05■■■■■ 5.28
Gm1043A0A140LJC2 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC48.02■■■■■ 5.28
Gm1043A0A140LJC2 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC47.98■■■■■ 5.27
Gm1043A0A140LJC2 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC47.72■■■■■ 5.23
Gm1043A0A140LJC2 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC47.69■■■■■ 5.22
Gm1043A0A140LJC2 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC47.62■■■■■ 5.21
Gm1043A0A140LJC2 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC47.6■■■■■ 5.21
Gm1043A0A140LJC2 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC47.56■■■■■ 5.2
Gm1043A0A140LJC2 Gm25238-201ENSMUST00000174914 89 ntBASIC47.55■■■■■ 5.2
Gm1043A0A140LJC2 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC47.4■■■■■ 5.18
Gm1043A0A140LJC2 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC47.33■■■■■ 5.17
Gm1043A0A140LJC2 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC47.31■■■■■ 5.16
Gm1043A0A140LJC2 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC47.27■■■■■ 5.16
Gm1043A0A140LJC2 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC47.05■■■■■ 5.12
Gm1043A0A140LJC2 Psd-208ENSMUST00000224556 2034 ntBASIC46.85■■■■■ 5.09
Gm1043A0A140LJC2 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC46.78■■■■■ 5.08
Gm1043A0A140LJC2 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC46.59■■■■■ 5.05
Gm1043A0A140LJC2 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC46.31■■■■■ 5
Gm1043A0A140LJC2 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC46.23■■■■■ 4.99
Gm1043A0A140LJC2 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC46.19■■■■■ 4.98
Gm1043A0A140LJC2 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC46.1■■■■■ 4.97
Gm1043A0A140LJC2 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC45.98■■■■■ 4.95
Gm1043A0A140LJC2 Gm27325-201ENSMUST00000175467 74 ntBASIC45.95■■■■■ 4.95
Gm1043A0A140LJC2 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC45.94■■■■■ 4.95
Gm1043A0A140LJC2 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC45.88■■■■■ 4.93
Gm1043A0A140LJC2 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC45.82■■■■■ 4.93
Gm1043A0A140LJC2 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC45.53■■■■■ 4.88
Gm1043A0A140LJC2 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC45.51■■■■■ 4.88
Gm1043A0A140LJC2 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC45.42■■■■■ 4.86
Gm1043A0A140LJC2 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC45.42■■■■■ 4.86
Gm1043A0A140LJC2 Gm25262-201ENSMUST00000174934 133 ntBASIC45.35■■■■■ 4.85
Gm1043A0A140LJC2 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC45.33■■■■■ 4.85
Gm1043A0A140LJC2 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC45.26■■■■■ 4.84
Gm1043A0A140LJC2 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC45.21■■■■■ 4.83
Gm1043A0A140LJC2 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC45.18■■■■■ 4.82
Gm1043A0A140LJC2 Rab21-202ENSMUST00000218831 843 ntBASIC45.14■■■■■ 4.82
Gm1043A0A140LJC2 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC45.1■■■■■ 4.81
Gm1043A0A140LJC2 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC45.02■■■■■ 4.8
Gm1043A0A140LJC2 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC44.95■■■■■ 4.79
Gm1043A0A140LJC2 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC44.8■■■■■ 4.76
Gm1043A0A140LJC2 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC44.79■■■■■ 4.76
Gm1043A0A140LJC2 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC44.79■■■■■ 4.76
Gm1043A0A140LJC2 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC44.77■■■■■ 4.76
Gm1043A0A140LJC2 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC44.72■■■■■ 4.75
Gm1043A0A140LJC2 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC44.71■■■■■ 4.75
Gm1043A0A140LJC2 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC44.7■■■■■ 4.75
Gm1043A0A140LJC2 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC44.69■■■■■ 4.75
Gm1043A0A140LJC2 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC44.66■■■■■ 4.74
Gm1043A0A140LJC2 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC44.63■■■■■ 4.73
Gm1043A0A140LJC2 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC44.58■■■■■ 4.73
Gm1043A0A140LJC2 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC44.58■■■■■ 4.73
Gm1043A0A140LJC2 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC44.38■■■■■ 4.7
Gm1043A0A140LJC2 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC44.38■■■■■ 4.7
Gm1043A0A140LJC2 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC44.38■■■■■ 4.69
Gm1043A0A140LJC2 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC44.35■■■■■ 4.69
Gm1043A0A140LJC2 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC44.3■■■■■ 4.68
Gm1043A0A140LJC2 Gm26115-201ENSMUST00000175605 87 ntBASIC44.25■■■■■ 4.67
Gm1043A0A140LJC2 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC44.23■■■■■ 4.67
Gm1043A0A140LJC2 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC44.21■■■■■ 4.67
Gm1043A0A140LJC2 Gm8109-201ENSMUST00000194076 746 ntBASIC44.17■■■■■ 4.66
Gm1043A0A140LJC2 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC44.15■■■■■ 4.66
Gm1043A0A140LJC2 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC44.13■■■■■ 4.65
Gm1043A0A140LJC2 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC44.12■■■■■ 4.65
Gm1043A0A140LJC2 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC44.1■■■■■ 4.65
Gm1043A0A140LJC2 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC44.08■■■■■ 4.65
Gm1043A0A140LJC2 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC44.07■■■■■ 4.64
Gm1043A0A140LJC2 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC44.06■■■■■ 4.64
Gm1043A0A140LJC2 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC43.98■■■■■ 4.63
Gm1043A0A140LJC2 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC43.97■■■■■ 4.63
Gm1043A0A140LJC2 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC43.94■■■■■ 4.62
Gm1043A0A140LJC2 Gm10524-201ENSMUST00000181931 1893 ntBASIC43.89■■■■■ 4.62
Gm1043A0A140LJC2 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC43.78■■■■■ 4.6
Gm1043A0A140LJC2 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC43.76■■■■■ 4.6
Gm1043A0A140LJC2 Gm42596-201ENSMUST00000196305 1958 ntBASIC43.74■■■■■ 4.59
Gm1043A0A140LJC2 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC43.72■■■■■ 4.59
Gm1043A0A140LJC2 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC43.71■■■■■ 4.59
Gm1043A0A140LJC2 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC43.7■■■■■ 4.59
Gm1043A0A140LJC2 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC43.7■■■■■ 4.59
Gm1043A0A140LJC2 Gm17082-201ENSMUST00000166043 1091 ntBASIC43.67■■■■■ 4.58
Retrieved 100 of 76,532 protein–RNA pairs in 11.8 ms