RNA–Protein interactions for RNA: YOR340C

RPA43, Transcript of RNA polymerase I subunit A43, yeastyeast

Gene RPA43, Length 981 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPA43YOR340C CUE3P53137 624 aaKnown RBP3.58□□□□□ -1.84
RPA43YOR340C DCP2P53550 970 aaKnown RBP3.58□□□□□ -1.84
RPA43YOR340C YNL146WP53906 100 aa3.58□□□□□ -1.84
RPA43YOR340C NCS2P53923 493 aaPredicted RBP3.58□□□□□ -1.84
RPA43YOR340C SPC19Q03954 165 aa3.58□□□□□ -1.84
RPA43YOR340C YLH47Q06493 454 aa3.58□□□□□ -1.84
RPA43YOR340C IES4Q08561 116 aa3.58□□□□□ -1.84
RPA43YOR340C LYS21Q12122 440 aaKnown RBP3.58□□□□□ -1.84
RPA43YOR340C NBL1Q3E7Y6 73 aa3.58□□□□□ -1.84
RPA43YOR340C HIS4P00815 799 aaKnown RBP3.57□□□□□ -1.84
RPA43YOR340C ADE4P04046 510 aaKnown RBP3.57□□□□□ -1.84
RPA43YOR340C CKA2P19454 339 aa3.57□□□□□ -1.84
RPA43YOR340C POL4P25615 582 aa3.57□□□□□ -1.84
RPA43YOR340C TMT1P32643 299 aa3.57□□□□□ -1.84
RPA43YOR340C KES1P35844 434 aaKnown RBP3.57□□□□□ -1.84
RPA43YOR340C LTP1P40347 161 aa3.57□□□□□ -1.84
RPA43YOR340C SNO3P43544 222 aa3.57□□□□□ -1.84
RPA43YOR340C MNP1P53163 194 aaPredicted RBP3.57□□□□□ -1.84
RPA43YOR340C CAF130P53280 1122 aaPredicted RBP3.57□□□□□ -1.84
RPA43YOR340C RTT102P53330 157 aa3.57□□□□□ -1.84
RPA43YOR340C PNG1Q02890 363 aa3.57□□□□□ -1.84
RPA43YOR340C TAF11Q04226 346 aa3.57□□□□□ -1.84
RPA43YOR340C EMI2Q04409 500 aaKnown RBP3.57□□□□□ -1.84
RPA43YOR340C TPO3Q06451 622 aa3.57□□□□□ -1.84
RPA43YOR340C RAD34Q06665 692 aa3.57□□□□□ -1.84
RPA43YOR340C TCO89Q08921 799 aa3.57□□□□□ -1.84
RPA43YOR340C RCN2Q12044 265 aa3.57□□□□□ -1.84
RPA43YOR340C NMD4Q12129 218 aa3.57□□□□□ -1.84
RPA43YOR340C FRE7Q12333 620 aa3.57□□□□□ -1.84
RPA43YOR340C YLR111WQ12528 110 aa3.57□□□□□ -1.84
RPA43YOR340C HSH49Q99181 213 aaPredicted RBP3.57□□□□□ -1.84
RPA43YOR340C CCH1P50077 2039 aa3.56□□□□□ -1.84
RPA43YOR340C ARG3P05150 338 aa3.56□□□□□ -1.84
RPA43YOR340C TCP1P12612 559 aaKnown RBP3.56□□□□□ -1.84
RPA43YOR340C PTP1P25044 335 aa3.56□□□□□ -1.84
RPA43YOR340C BMH1P29311 267 aaKnown RBP3.56□□□□□ -1.84
RPA43YOR340C COT1P32798 439 aa3.56□□□□□ -1.84
RPA43YOR340C ADE17P38009 592 aaKnown RBP3.56□□□□□ -1.84
RPA43YOR340C UBP13P38187 747 aa3.56□□□□□ -1.84
RPA43YOR340C RFT1P38206 574 aaPredicted RBP3.56□□□□□ -1.84
RPA43YOR340C FTH1P38310 465 aa3.56□□□□□ -1.84
RPA43YOR340C SLX1P38324 304 aa3.56□□□□□ -1.84
RPA43YOR340C VTC2P43585 828 aa3.56□□□□□ -1.84
RPA43YOR340C RMD8P43620 662 aa3.56□□□□□ -1.84
RPA43YOR340C NBP1P52919 319 aaPredicted RBP3.56□□□□□ -1.84
RPA43YOR340C LCL3P53153 274 aa3.56□□□□□ -1.84
RPA43YOR340C TOF1P53840 1238 aa3.56□□□□□ -1.84
RPA43YOR340C RTC4P53850 401 aa3.56□□□□□ -1.84
RPA43YOR340C INA17Q02888 182 aa3.56□□□□□ -1.84
RPA43YOR340C YLR287CQ05881 355 aa3.56□□□□□ -1.84
RPA43YOR340C PSR1Q07800 427 aa3.56□□□□□ -1.84
RPA43YOR340C SMC5Q08204 1093 aa3.56□□□□□ -1.84
RPA43YOR340C YOL075CQ08234 1294 aa3.56□□□□□ -1.84
RPA43YOR340C AFT2Q08957 416 aa3.56□□□□□ -1.84
RPA43YOR340C LEA1Q08963 238 aaPredicted RBP3.56□□□□□ -1.84
RPA43YOR340C SCM3Q12334 223 aa3.56□□□□□ -1.84
RPA43YOR340C SPE4Q12455 300 aa3.56□□□□□ -1.84
RPA43YOR340C GPA1P08539 472 aa3.55□□□□□ -1.84
RPA43YOR340C ILS1P09436 1072 aaKnown RBP3.55□□□□□ -1.84
RPA43YOR340C RPL4AP10664 362 aaKnown RBP3.55□□□□□ -1.84
RPA43YOR340C RED1P14291 827 aa3.55□□□□□ -1.84
RPA43YOR340C GLN3P18494 730 aa3.55□□□□□ -1.84
RPA43YOR340C PTC6P25646 442 aa3.55□□□□□ -1.84
RPA43YOR340C PDB1P32473 366 aaKnown RBP3.55□□□□□ -1.84
RPA43YOR340C GSH1P32477 678 aa3.55□□□□□ -1.84
RPA43YOR340C YSC83P32792 385 aa3.55□□□□□ -1.84
RPA43YOR340C NFU1P32860 256 aa3.55□□□□□ -1.84
RPA43YOR340C SOF1P33750 489 aaKnown RBP3.55□□□□□ -1.84
RPA43YOR340C LHS1P36016 881 aa3.55□□□□□ -1.84
RPA43YOR340C AUR1P36107 401 aaPredicted RBP3.55□□□□□ -1.84
RPA43YOR340C SRO77P38163 1010 aa3.55□□□□□ -1.84
RPA43YOR340C RFS1P38234 210 aaKnown RBP3.55□□□□□ -1.84
RPA43YOR340C VID24P38263 362 aa3.55□□□□□ -1.84
RPA43YOR340C YHL026CP38740 315 aa3.55□□□□□ -1.84
RPA43YOR340C SEC31P38968 1273 aaKnown RBP3.55□□□□□ -1.84
RPA43YOR340C ECM10P39987 644 aa3.55□□□□□ -1.84
RPA43YOR340C TPA1P40032 644 aaKnown RBP3.55□□□□□ -1.84
RPA43YOR340C ASG1P40467 964 aa3.55□□□□□ -1.84
RPA43YOR340C ARF3P40994 183 aaRIP-Chip data3.55□□□□□ -1.84not detected
RPA43YOR340C NMD5P46970 1048 aa3.55□□□□□ -1.84
RPA43YOR340C RPL4BP49626 362 aaKnown RBP3.55□□□□□ -1.84
RPA43YOR340C GLO1P50107 326 aa3.55□□□□□ -1.84
RPA43YOR340C ORC5P50874 479 aa3.55□□□□□ -1.84
RPA43YOR340C ERG13P54839 491 aaKnown RBP3.55□□□□□ -1.84
RPA43YOR340C RSM28Q03430 361 aa3.55□□□□□ -1.84
RPA43YOR340C SNU56Q03782 492 aaKnown RBP3.55□□□□□ -1.84
RPA43YOR340C LSP1Q12230 341 aaKnown RBP3.55□□□□□ -1.84
RPA43YOR340C HIF1Q12373 385 aa3.55□□□□□ -1.84
RPA43YOR340C ERP4Q12450 207 aa3.55□□□□□ -1.84
RPA43YOR340C MET17P06106 444 aa3.54□□□□□ -1.84
RPA43YOR340C CBS1P14066 229 aa3.54□□□□□ -1.84
RPA43YOR340C CKA1P15790 372 aa3.54□□□□□ -1.84
RPA43YOR340C FUR1P18562 216 aaKnown RBP3.54□□□□□ -1.84
RPA43YOR340C PWP1P21304 576 aaKnown RBP3.54□□□□□ -1.84
RPA43YOR340C VMA16P23968 213 aa3.54□□□□□ -1.84
RPA43YOR340C OCA4P25366 362 aa3.54□□□□□ -1.84
RPA43YOR340C ADK2P26364 225 aa3.54□□□□□ -1.84
RPA43YOR340C DPH2P32461 534 aa3.54□□□□□ -1.84
RPA43YOR340C GCS1P35197 352 aa3.54□□□□□ -1.84
RPA43YOR340C AGP2P38090 596 aa3.54□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 18.9 ms