Protein–RNA interactions for Protein: P23968

VMA16, V-type proton ATPase subunit c'', yeastyeast

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VMA16P23968 NSR1YGR159C 1245 nt15.34■□□□□ 0.05
VMA16P23968 YML009W-BYML009W-B 477 nt15.14■□□□□ 0.01
VMA16P23968 NOP1YDL014W 984 nt14.65□□□□□ -0.06
VMA16P23968 MDJ1YFL016C 1536 nt13.93□□□□□ -0.18
VMA16P23968 SSA3YBL075C 1950 nt13.75□□□□□ -0.21
VMA16P23968 YKL036CYKL036C 393 nt13.39□□□□□ -0.27
VMA16P23968 YJL027CYJL027C 417 nt12.91□□□□□ -0.34
VMA16P23968 SRX1YKL086W 384 nt12.8□□□□□ -0.36
VMA16P23968 Q0297Q0297 156 nt12.75□□□□□ -0.37
VMA16P23968 DBP2YNL112W 1641 nt12.16□□□□□ -0.46
VMA16P23968 Q0182Q0182 405 nt12.13□□□□□ -0.47
VMA16P23968 SCS3YGL126W 1143 nt12.11□□□□□ -0.47
VMA16P23968 YCR051WYCR051W 669 nt12.08□□□□□ -0.48
VMA16P23968 YBR190WYBR190W 312 nt12.02□□□□□ -0.49
VMA16P23968 RTC3YHR087W 336 nt11.85□□□□□ -0.51
VMA16P23968 PAC11YDR488C 1602 nt11.75□□□□□ -0.53
VMA16P23968 TRN1tP(UGG)A 72 nt11.74□□□□□ -0.53
VMA16P23968 SUF9tP(UGG)F 72 nt11.74□□□□□ -0.53
VMA16P23968 SUF8tP(UGG)H 72 nt11.74□□□□□ -0.53
VMA16P23968 tP(UGG)LtP(UGG)L 72 nt11.74□□□□□ -0.53
VMA16P23968 SUF7tP(UGG)M 72 nt11.74□□□□□ -0.53
VMA16P23968 tP(UGG)N1tP(UGG)N1 72 nt11.74□□□□□ -0.53
VMA16P23968 tP(UGG)N2tP(UGG)N2 72 nt11.74□□□□□ -0.53
VMA16P23968 tP(UGG)O1tP(UGG)O1 72 nt11.74□□□□□ -0.53
VMA16P23968 SUF11tP(UGG)O2 72 nt11.74□□□□□ -0.53
VMA16P23968 NVJ2YPR091C 2313 nt11.66□□□□□ -0.54
VMA16P23968 CCC1YLR220W 969 nt11.58□□□□□ -0.56
VMA16P23968 YOL085CYOL085C 342 nt11.56□□□□□ -0.56
VMA16P23968 SSA4YER103W 1929 nt11.55□□□□□ -0.56
VMA16P23968 MOT3YMR070W 1473 nt11.52□□□□□ -0.56
VMA16P23968 RVS167YDR388W 1449 nt11.51□□□□□ -0.57
VMA16P23968 FPS1YLL043W 2010 nt11.5□□□□□ -0.57
VMA16P23968 RPP1BYDL130W 321 nt11.43□□□□□ -0.58
VMA16P23968 PKP1YIL042C 1185 nt11.37□□□□□ -0.59
VMA16P23968 SPT5YML010W 3192 nt11.29□□□□□ -0.6
VMA16P23968 BDF1YLR399C 2061 nt11.26□□□□□ -0.61
VMA16P23968 SCJ1YMR214W 1134 nt11.24□□□□□ -0.61
VMA16P23968 SSA1YAL005C 1929 nt11.22□□□□□ -0.61
VMA16P23968 PUT4YOR348C 1884 nt11.22□□□□□ -0.61
VMA16P23968 TAT1YBR069C 1860 nt11.08□□□□□ -0.64
VMA16P23968 tP(UGG)O3tP(UGG)O3 72 nt11□□□□□ -0.65
VMA16P23968 PET122YER153C 765 nt10.93□□□□□ -0.66
VMA16P23968 SHR5YOL110W 714 nt10.92□□□□□ -0.66
VMA16P23968 URN1YPR152C 1398 nt10.85□□□□□ -0.67
VMA16P23968 SCR1SCR1 522 nt10.83□□□□□ -0.68
VMA16P23968 POA1YBR022W 534 nt10.83□□□□□ -0.68
VMA16P23968 ATS1YAL020C 1002 nt10.81□□□□□ -0.68
VMA16P23968 ARE1YCR048W 1833 nt10.8□□□□□ -0.68
VMA16P23968 BSC6YOL137W 1494 nt10.78□□□□□ -0.68
VMA16P23968 SAH1YER043C 1350 nt10.77□□□□□ -0.68
VMA16P23968 YHR049C-AYHR049C-A 297 nt10.76□□□□□ -0.69
VMA16P23968 UME6YDR207C 2511 nt10.74□□□□□ -0.69
VMA16P23968 OPI9YLR338W 858 nt10.74□□□□□ -0.69
VMA16P23968 DEP1YAL013W 1218 nt10.72□□□□□ -0.69
VMA16P23968 RPN10YHR200W 807 nt10.71□□□□□ -0.69
VMA16P23968 YDJ1YNL064C 1230 nt10.67□□□□□ -0.7
VMA16P23968 RRN5YLR141W 1092 nt10.58□□□□□ -0.72
VMA16P23968 BUD23YCR047C 828 nt10.56□□□□□ -0.72
VMA16P23968 YNL208WYNL208W 600 nt10.54□□□□□ -0.72
VMA16P23968 PUN1YLR414C 792 nt10.49□□□□□ -0.73
VMA16P23968 GAR1YHR089C 618 nt10.42□□□□□ -0.74
VMA16P23968 PTC2YER089C 1395 nt10.39□□□□□ -0.75
VMA16P23968 YER088W-BYER088W-B 147 nt10.39□□□□□ -0.75
VMA16P23968 RSB1YOR049C 1065 nt10.36□□□□□ -0.75
VMA16P23968 NAB2YGL122C 1578 nt10.34□□□□□ -0.75
VMA16P23968 YJR018WYJR018W 363 nt10.33□□□□□ -0.76
VMA16P23968 MEP2YNL142W 1500 nt10.27□□□□□ -0.77
VMA16P23968 GUT2YIL155C 1950 nt10.23□□□□□ -0.77
VMA16P23968 BOR1YNL275W 1731 nt10.22□□□□□ -0.77
VMA16P23968 MCH5YOR306C 1566 nt10.2□□□□□ -0.78
VMA16P23968 PCH2YBR186W 1695 nt10.18□□□□□ -0.78
VMA16P23968 FPR4YLR449W 1179 nt10.18□□□□□ -0.78
VMA16P23968 YBR220CYBR220C 1683 nt10.17□□□□□ -0.78
VMA16P23968 RPP2BYDR382W 333 nt10.12□□□□□ -0.79
VMA16P23968 DAL1YIR027C 1383 nt10.12□□□□□ -0.79
VMA16P23968 TIR1YER011W 765 nt10.11□□□□□ -0.79
VMA16P23968 YJR120WYJR120W 351 nt10.06□□□□□ -0.8
VMA16P23968 DCW1YKL046C 1350 nt10.05□□□□□ -0.8
VMA16P23968 INM2YDR287W 879 nt10.05□□□□□ -0.8
VMA16P23968 FIS1YIL065C 468 nt10.05□□□□□ -0.8
VMA16P23968 SEC11YIR022W 504 nt10.02□□□□□ -0.81
VMA16P23968 PST2YDR032C 597 nt10□□□□□ -0.81
VMA16P23968 PHO4YFR034C 939 nt10□□□□□ -0.81
VMA16P23968 PIB2YGL023C 1908 nt9.97□□□□□ -0.81
VMA16P23968 YHR165W-AYHR165W-A 312 nt9.95□□□□□ -0.82
VMA16P23968 YMR090WYMR090W 684 nt9.94□□□□□ -0.82
VMA16P23968 YPS1YLR120C 1710 nt9.91□□□□□ -0.82
VMA16P23968 YJL225CYJL225C 5277 nt9.89□□□□□ -0.83
VMA16P23968 EMI2YDR516C 1503 nt9.88□□□□□ -0.83
VMA16P23968 YBL100CYBL100C 315 nt9.88□□□□□ -0.83
VMA16P23968 RPM1RPM1 483 nt9.85□□□□□ -0.83
VMA16P23968 SDH1YKL148C 1923 nt9.84□□□□□ -0.83
VMA16P23968 ALG12YNR030W 1656 nt9.84□□□□□ -0.83
VMA16P23968 SRB2YHR041C 633 nt9.82□□□□□ -0.84
VMA16P23968 YDR095CYDR095C 411 nt9.78□□□□□ -0.84
VMA16P23968 ALF1YNL148C 765 nt9.78□□□□□ -0.84
VMA16P23968 RTF1YGL244W 1677 nt9.77□□□□□ -0.84
VMA16P23968 BDH2YAL061W 1254 nt9.74□□□□□ -0.85
VMA16P23968 FUN26YAL022C 1554 nt9.71□□□□□ -0.86
VMA16P23968 YDL221WYDL221W 552 nt9.7□□□□□ -0.86
Retrieved 100 of 7,029 protein–RNA pairs in 8.7 ms