Protein–RNA interactions for Protein: P38187

UBP13, Ubiquitin carboxyl-terminal hydrolase 13, yeastyeast

Predictions only

Length 747 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP13P38187 YML009W-BYML009W-B 477 nt22.47■■□□□ 1.19
UBP13P38187 NSR1YGR159C 1245 nt22.32■■□□□ 1.16
UBP13P38187 NOP1YDL014W 984 nt21.91■■□□□ 1.1
UBP13P38187 YKL036CYKL036C 393 nt20.23■□□□□ 0.83
UBP13P38187 MDJ1YFL016C 1536 nt19.72■□□□□ 0.75
UBP13P38187 Q0297Q0297 156 nt19.16■□□□□ 0.66
UBP13P38187 SRX1YKL086W 384 nt19.11■□□□□ 0.65
UBP13P38187 YJL027CYJL027C 417 nt18.89■□□□□ 0.61
UBP13P38187 SCS3YGL126W 1143 nt18.39■□□□□ 0.53
UBP13P38187 YCR051WYCR051W 669 nt18.15■□□□□ 0.5
UBP13P38187 YOL085CYOL085C 342 nt17.52■□□□□ 0.4
UBP13P38187 DBP2YNL112W 1641 nt17.46■□□□□ 0.39
UBP13P38187 TRN1tP(UGG)A 72 nt17.23■□□□□ 0.35
UBP13P38187 SUF9tP(UGG)F 72 nt17.23■□□□□ 0.35
UBP13P38187 SUF8tP(UGG)H 72 nt17.23■□□□□ 0.35
UBP13P38187 tP(UGG)LtP(UGG)L 72 nt17.23■□□□□ 0.35
UBP13P38187 SUF7tP(UGG)M 72 nt17.23■□□□□ 0.35
UBP13P38187 tP(UGG)N1tP(UGG)N1 72 nt17.23■□□□□ 0.35
UBP13P38187 tP(UGG)N2tP(UGG)N2 72 nt17.23■□□□□ 0.35
UBP13P38187 tP(UGG)O1tP(UGG)O1 72 nt17.23■□□□□ 0.35
UBP13P38187 SUF11tP(UGG)O2 72 nt17.23■□□□□ 0.35
UBP13P38187 PKP1YIL042C 1185 nt17.23■□□□□ 0.35
UBP13P38187 RPP1BYDL130W 321 nt17.2■□□□□ 0.34
UBP13P38187 CCC1YLR220W 969 nt17.09■□□□□ 0.33
UBP13P38187 YBR190WYBR190W 312 nt16.84■□□□□ 0.29
UBP13P38187 RVS167YDR388W 1449 nt16.49■□□□□ 0.23
UBP13P38187 RTC3YHR087W 336 nt16.49■□□□□ 0.23
UBP13P38187 ATS1YAL020C 1002 nt16.49■□□□□ 0.23
UBP13P38187 PET122YER153C 765 nt16.4■□□□□ 0.22
UBP13P38187 SCJ1YMR214W 1134 nt16.39■□□□□ 0.21
UBP13P38187 tP(UGG)O3tP(UGG)O3 72 nt16.33■□□□□ 0.2
UBP13P38187 SCR1SCR1 522 nt16.28■□□□□ 0.2
UBP13P38187 RRN5YLR141W 1092 nt15.95■□□□□ 0.14
UBP13P38187 SHR5YOL110W 714 nt15.91■□□□□ 0.14
UBP13P38187 YDJ1YNL064C 1230 nt15.81■□□□□ 0.12
UBP13P38187 RSB1YOR049C 1065 nt15.65■□□□□ 0.1
UBP13P38187 YER088W-BYER088W-B 147 nt15.63■□□□□ 0.09
UBP13P38187 GAR1YHR089C 618 nt15.45■□□□□ 0.06
UBP13P38187 DEP1YAL013W 1218 nt15.43■□□□□ 0.06
UBP13P38187 URN1YPR152C 1398 nt15.43■□□□□ 0.06
UBP13P38187 PST2YDR032C 597 nt15.26■□□□□ 0.03
UBP13P38187 RPN10YHR200W 807 nt15.24■□□□□ 0.03
UBP13P38187 YNL208WYNL208W 600 nt15.22■□□□□ 0.03
UBP13P38187 PUT4YOR348C 1884 nt15.21■□□□□ 0.03
UBP13P38187 OPI9YLR338W 858 nt15.2■□□□□ 0.02
UBP13P38187 SAH1YER043C 1350 nt15.09■□□□□ 0.01
UBP13P38187 ARE1YCR048W 1833 nt14.96□□□□□ -0.01
UBP13P38187 SSA3YBL075C 1950 nt14.95□□□□□ -0.02
UBP13P38187 TIR1YER011W 765 nt14.92□□□□□ -0.02
UBP13P38187 POA1YBR022W 534 nt14.78□□□□□ -0.04
UBP13P38187 YHR049C-AYHR049C-A 297 nt14.77□□□□□ -0.05
UBP13P38187 PUN1YLR414C 792 nt14.77□□□□□ -0.05
UBP13P38187 YJR018WYJR018W 363 nt14.73□□□□□ -0.05
UBP13P38187 SSA1YAL005C 1929 nt14.71□□□□□ -0.05
UBP13P38187 YKL097CYKL097C 411 nt14.69□□□□□ -0.06
UBP13P38187 SHU1YHL006C 453 nt14.62□□□□□ -0.07
UBP13P38187 PTC2YER089C 1395 nt14.58□□□□□ -0.08
UBP13P38187 BUD23YCR047C 828 nt14.47□□□□□ -0.09
UBP13P38187 RPP2BYDR382W 333 nt14.47□□□□□ -0.09
UBP13P38187 YJR120WYJR120W 351 nt14.45□□□□□ -0.1
UBP13P38187 SRB2YHR041C 633 nt14.44□□□□□ -0.1
UBP13P38187 BSC6YOL137W 1494 nt14.43□□□□□ -0.1
UBP13P38187 YAL037C-BYAL037C-B 975 nt14.38□□□□□ -0.11
UBP13P38187 NAB2YGL122C 1578 nt14.38□□□□□ -0.11
UBP13P38187 WWM1YFL010C 636 nt14.27□□□□□ -0.13
UBP13P38187 INM2YDR287W 879 nt14.23□□□□□ -0.13
UBP13P38187 YGR021WYGR021W 873 nt14.22□□□□□ -0.13
UBP13P38187 DAL1YIR027C 1383 nt14.2□□□□□ -0.14
UBP13P38187 FPR4YLR449W 1179 nt14.18□□□□□ -0.14
UBP13P38187 BDH2YAL061W 1254 nt14.17□□□□□ -0.14
UBP13P38187 HOM6YJR139C 1080 nt14.15□□□□□ -0.14
UBP13P38187 FIS1YIL065C 468 nt14.12□□□□□ -0.15
UBP13P38187 MNP1YGL068W 585 nt14.06□□□□□ -0.16
UBP13P38187 YBL100CYBL100C 315 nt14.06□□□□□ -0.16
UBP13P38187 YOR139CYOR139C 393 nt14.06□□□□□ -0.16
UBP13P38187 YFL021C-AYFL021C-A 855 nt14.04□□□□□ -0.16
UBP13P38187 PHO4YFR034C 939 nt14.04□□□□□ -0.16
UBP13P38187 LSM3YLR438C-A 270 nt14.01□□□□□ -0.17
UBP13P38187 NPL3YDR432W 1245 nt13.98□□□□□ -0.17
UBP13P38187 RKM5YLR137W 1104 nt13.94□□□□□ -0.18
UBP13P38187 TRM9YML014W 840 nt13.92□□□□□ -0.18
UBP13P38187 FUN26YAL022C 1554 nt13.91□□□□□ -0.18
UBP13P38187 YOL037CYOL037C 354 nt13.88□□□□□ -0.19
UBP13P38187 YPS1YLR120C 1710 nt13.75□□□□□ -0.21
UBP13P38187 CCT6YDR188W 1641 nt13.74□□□□□ -0.21
UBP13P38187 ALF1YNL148C 765 nt13.72□□□□□ -0.21
UBP13P38187 SPT5YML010W 3192 nt13.72□□□□□ -0.21
UBP13P38187 YDR095CYDR095C 411 nt13.67□□□□□ -0.22
UBP13P38187 SUF2tP(AGG)C 72 nt13.66□□□□□ -0.22
UBP13P38187 SUF10tP(AGG)N 72 nt13.66□□□□□ -0.22
UBP13P38187 YHR165W-AYHR165W-A 312 nt13.62□□□□□ -0.23
UBP13P38187 YLR281CYLR281C 468 nt13.56□□□□□ -0.24
UBP13P38187 tM(CAU)CtM(CAU)C 72 nt13.54□□□□□ -0.24
UBP13P38187 IMT4tM(CAU)E 72 nt13.54□□□□□ -0.24
UBP13P38187 IMT3tM(CAU)J3 72 nt13.54□□□□□ -0.24
UBP13P38187 IMT1tM(CAU)O1 72 nt13.54□□□□□ -0.24
UBP13P38187 IMT2tM(CAU)P 72 nt13.54□□□□□ -0.24
UBP13P38187 MEP2YNL142W 1500 nt13.54□□□□□ -0.24
UBP13P38187 WHI5YOR083W 888 nt13.52□□□□□ -0.25
UBP13P38187 SIS1YNL007C 1059 nt13.49□□□□□ -0.25
Retrieved 100 of 7,029 protein–RNA pairs in 13.3 ms