Protein–RNA interactions for Protein: P39987

ECM10, Heat shock protein SSC3, mitochondrial, yeastyeast

Predictions only

Length 644 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ECM10P39987 NSR1YGR159C 1245 nt19.35■□□□□ 0.69
ECM10P39987 YML009W-BYML009W-B 477 nt19.08■□□□□ 0.64
ECM10P39987 NOP1YDL014W 984 nt18.31■□□□□ 0.52
ECM10P39987 MDJ1YFL016C 1536 nt17.67■□□□□ 0.42
ECM10P39987 YKL036CYKL036C 393 nt16.6■□□□□ 0.25
ECM10P39987 YJL027CYJL027C 417 nt16.2■□□□□ 0.18
ECM10P39987 SRX1YKL086W 384 nt16.04■□□□□ 0.16
ECM10P39987 Q0297Q0297 156 nt15.93■□□□□ 0.14
ECM10P39987 DBP2YNL112W 1641 nt15.46■□□□□ 0.07
ECM10P39987 YCR051WYCR051W 669 nt15.19■□□□□ 0.02
ECM10P39987 YBR190WYBR190W 312 nt15.13■□□□□ 0.01
ECM10P39987 SCS3YGL126W 1143 nt15.11■□□□□ 0.01
ECM10P39987 TRN1tP(UGG)A 72 nt14.79□□□□□ -0.04
ECM10P39987 SUF9tP(UGG)F 72 nt14.79□□□□□ -0.04
ECM10P39987 SUF8tP(UGG)H 72 nt14.79□□□□□ -0.04
ECM10P39987 tP(UGG)LtP(UGG)L 72 nt14.79□□□□□ -0.04
ECM10P39987 SUF7tP(UGG)M 72 nt14.79□□□□□ -0.04
ECM10P39987 tP(UGG)N1tP(UGG)N1 72 nt14.79□□□□□ -0.04
ECM10P39987 tP(UGG)N2tP(UGG)N2 72 nt14.79□□□□□ -0.04
ECM10P39987 tP(UGG)O1tP(UGG)O1 72 nt14.79□□□□□ -0.04
ECM10P39987 SUF11tP(UGG)O2 72 nt14.79□□□□□ -0.04
ECM10P39987 RTC3YHR087W 336 nt14.76□□□□□ -0.05
ECM10P39987 CCC1YLR220W 969 nt14.65□□□□□ -0.06
ECM10P39987 YOL085CYOL085C 342 nt14.36□□□□□ -0.11
ECM10P39987 RVS167YDR388W 1449 nt14.32□□□□□ -0.12
ECM10P39987 SSA3YBL075C 1950 nt14.31□□□□□ -0.12
ECM10P39987 RPP1BYDL130W 321 nt14.29□□□□□ -0.12
ECM10P39987 SCJ1YMR214W 1134 nt14.26□□□□□ -0.13
ECM10P39987 PKP1YIL042C 1185 nt14.22□□□□□ -0.13
ECM10P39987 PUT4YOR348C 1884 nt14.13□□□□□ -0.15
ECM10P39987 tP(UGG)O3tP(UGG)O3 72 nt13.85□□□□□ -0.19
ECM10P39987 SHR5YOL110W 714 nt13.75□□□□□ -0.21
ECM10P39987 ARE1YCR048W 1833 nt13.74□□□□□ -0.21
ECM10P39987 PET122YER153C 765 nt13.74□□□□□ -0.21
ECM10P39987 URN1YPR152C 1398 nt13.68□□□□□ -0.22
ECM10P39987 POA1YBR022W 534 nt13.66□□□□□ -0.22
ECM10P39987 SAH1YER043C 1350 nt13.63□□□□□ -0.23
ECM10P39987 DEP1YAL013W 1218 nt13.58□□□□□ -0.24
ECM10P39987 OPI9YLR338W 858 nt13.57□□□□□ -0.24
ECM10P39987 YHR049C-AYHR049C-A 297 nt13.54□□□□□ -0.24
ECM10P39987 ATS1YAL020C 1002 nt13.52□□□□□ -0.25
ECM10P39987 BSC6YOL137W 1494 nt13.43□□□□□ -0.26
ECM10P39987 SCR1SCR1 522 nt13.39□□□□□ -0.27
ECM10P39987 YDJ1YNL064C 1230 nt13.38□□□□□ -0.27
ECM10P39987 RRN5YLR141W 1092 nt13.3□□□□□ -0.28
ECM10P39987 RPN10YHR200W 807 nt13.29□□□□□ -0.28
ECM10P39987 YNL208WYNL208W 600 nt13.25□□□□□ -0.29
ECM10P39987 SPT5YML010W 3192 nt13.2□□□□□ -0.3
ECM10P39987 BUD23YCR047C 828 nt13.19□□□□□ -0.3
ECM10P39987 GAR1YHR089C 618 nt13.18□□□□□ -0.3
ECM10P39987 PUN1YLR414C 792 nt13.13□□□□□ -0.31
ECM10P39987 PTC2YER089C 1395 nt13.09□□□□□ -0.31
ECM10P39987 YER088W-BYER088W-B 147 nt13.04□□□□□ -0.32
ECM10P39987 YJR018WYJR018W 363 nt13.01□□□□□ -0.33
ECM10P39987 NAB2YGL122C 1578 nt12.96□□□□□ -0.33
ECM10P39987 SSA4YER103W 1929 nt12.91□□□□□ -0.34
ECM10P39987 RSB1YOR049C 1065 nt12.86□□□□□ -0.35
ECM10P39987 YJR120WYJR120W 351 nt12.8□□□□□ -0.36
ECM10P39987 FIS1YIL065C 468 nt12.76□□□□□ -0.37
ECM10P39987 TIR1YER011W 765 nt12.75□□□□□ -0.37
ECM10P39987 SSA1YAL005C 1929 nt12.73□□□□□ -0.37
ECM10P39987 DAL1YIR027C 1383 nt12.71□□□□□ -0.37
ECM10P39987 FPR4YLR449W 1179 nt12.68□□□□□ -0.38
ECM10P39987 MEP2YNL142W 1500 nt12.65□□□□□ -0.38
ECM10P39987 PHO4YFR034C 939 nt12.6□□□□□ -0.39
ECM10P39987 INM2YDR287W 879 nt12.58□□□□□ -0.4
ECM10P39987 RPP2BYDR382W 333 nt12.56□□□□□ -0.4
ECM10P39987 YPS1YLR120C 1710 nt12.53□□□□□ -0.4
ECM10P39987 PST2YDR032C 597 nt12.52□□□□□ -0.41
ECM10P39987 SRB2YHR041C 633 nt12.5□□□□□ -0.41
ECM10P39987 DCW1YKL046C 1350 nt12.49□□□□□ -0.41
ECM10P39987 BDF1YLR399C 2061 nt12.47□□□□□ -0.41
ECM10P39987 YBL100CYBL100C 315 nt12.4□□□□□ -0.42
ECM10P39987 YHR165W-AYHR165W-A 312 nt12.39□□□□□ -0.43
ECM10P39987 YDR095CYDR095C 411 nt12.37□□□□□ -0.43
ECM10P39987 TAT1YBR069C 1860 nt12.28□□□□□ -0.44
ECM10P39987 BDH2YAL061W 1254 nt12.28□□□□□ -0.44
ECM10P39987 EMI2YDR516C 1503 nt12.27□□□□□ -0.44
ECM10P39987 FUN26YAL022C 1554 nt12.26□□□□□ -0.45
ECM10P39987 YBR220CYBR220C 1683 nt12.22□□□□□ -0.45
ECM10P39987 CAC2YML102W 1407 nt12.2□□□□□ -0.46
ECM10P39987 PTP1YDL230W 1008 nt12.19□□□□□ -0.46
ECM10P39987 WWM1YFL010C 636 nt12.15□□□□□ -0.46
ECM10P39987 YMR090WYMR090W 684 nt12.15□□□□□ -0.46
ECM10P39987 YDL221WYDL221W 552 nt12.14□□□□□ -0.47
ECM10P39987 ALF1YNL148C 765 nt12.13□□□□□ -0.47
ECM10P39987 RPP2AYOL039W 321 nt12.13□□□□□ -0.47
ECM10P39987 TRM9YML014W 840 nt12.12□□□□□ -0.47
ECM10P39987 SDH1YKL148C 1923 nt12.08□□□□□ -0.48
ECM10P39987 YKL097CYKL097C 411 nt12.05□□□□□ -0.48
ECM10P39987 CCT6YDR188W 1641 nt12.03□□□□□ -0.48
ECM10P39987 LSM3YLR438C-A 270 nt12.02□□□□□ -0.49
ECM10P39987 SIS1YNL007C 1059 nt12.01□□□□□ -0.49
ECM10P39987 SHU1YHL006C 453 nt12□□□□□ -0.49
ECM10P39987 IRC15YPL017C 1500 nt12□□□□□ -0.49
ECM10P39987 SCC4YER147C 1875 nt11.94□□□□□ -0.5
ECM10P39987 SUF2tP(AGG)C 72 nt11.91□□□□□ -0.5
ECM10P39987 SUF10tP(AGG)N 72 nt11.91□□□□□ -0.5
ECM10P39987 GIS3YLR094C 1509 nt11.91□□□□□ -0.5
ECM10P39987 YFL021C-AYFL021C-A 855 nt11.9□□□□□ -0.5
Retrieved 100 of 7,029 protein–RNA pairs in 12.9 ms