Protein–RNA interactions for Protein: Q08204

SMC5, Structural maintenance of chromosomes protein 5, yeastyeast

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SMC5Q08204 YML009W-BYML009W-B 477 nt22.65■■□□□ 1.22
SMC5Q08204 NSR1YGR159C 1245 nt22.36■■□□□ 1.17
SMC5Q08204 NOP1YDL014W 984 nt22.14■■□□□ 1.13
SMC5Q08204 YKL036CYKL036C 393 nt20.57■□□□□ 0.88
SMC5Q08204 MDJ1YFL016C 1536 nt19.63■□□□□ 0.73
SMC5Q08204 Q0297Q0297 156 nt19.4■□□□□ 0.7
SMC5Q08204 SRX1YKL086W 384 nt19.31■□□□□ 0.68
SMC5Q08204 YJL027CYJL027C 417 nt19.24■□□□□ 0.67
SMC5Q08204 SCS3YGL126W 1143 nt18.78■□□□□ 0.6
SMC5Q08204 YCR051WYCR051W 669 nt18.34■□□□□ 0.53
SMC5Q08204 YOL085CYOL085C 342 nt17.79■□□□□ 0.44
SMC5Q08204 PKP1YIL042C 1185 nt17.48■□□□□ 0.39
SMC5Q08204 DBP2YNL112W 1641 nt17.43■□□□□ 0.38
SMC5Q08204 RPP1BYDL130W 321 nt17.41■□□□□ 0.38
SMC5Q08204 TRN1tP(UGG)A 72 nt17.34■□□□□ 0.37
SMC5Q08204 SUF9tP(UGG)F 72 nt17.34■□□□□ 0.37
SMC5Q08204 SUF8tP(UGG)H 72 nt17.34■□□□□ 0.37
SMC5Q08204 tP(UGG)LtP(UGG)L 72 nt17.34■□□□□ 0.37
SMC5Q08204 SUF7tP(UGG)M 72 nt17.34■□□□□ 0.37
SMC5Q08204 tP(UGG)N1tP(UGG)N1 72 nt17.34■□□□□ 0.37
SMC5Q08204 tP(UGG)N2tP(UGG)N2 72 nt17.34■□□□□ 0.37
SMC5Q08204 tP(UGG)O1tP(UGG)O1 72 nt17.34■□□□□ 0.37
SMC5Q08204 SUF11tP(UGG)O2 72 nt17.34■□□□□ 0.37
SMC5Q08204 CCC1YLR220W 969 nt17.17■□□□□ 0.34
SMC5Q08204 SCJ1YMR214W 1134 nt16.91■□□□□ 0.3
SMC5Q08204 ATS1YAL020C 1002 nt16.86■□□□□ 0.29
SMC5Q08204 YBR190WYBR190W 312 nt16.73■□□□□ 0.27
SMC5Q08204 PET122YER153C 765 nt16.59■□□□□ 0.25
SMC5Q08204 SCR1SCR1 522 nt16.53■□□□□ 0.24
SMC5Q08204 RVS167YDR388W 1449 nt16.53■□□□□ 0.24
SMC5Q08204 tP(UGG)O3tP(UGG)O3 72 nt16.47■□□□□ 0.23
SMC5Q08204 RTC3YHR087W 336 nt16.38■□□□□ 0.21
SMC5Q08204 RRN5YLR141W 1092 nt16.15■□□□□ 0.18
SMC5Q08204 SHR5YOL110W 714 nt15.96■□□□□ 0.15
SMC5Q08204 YDJ1YNL064C 1230 nt15.94■□□□□ 0.14
SMC5Q08204 RSB1YOR049C 1065 nt15.88■□□□□ 0.13
SMC5Q08204 YER088W-BYER088W-B 147 nt15.82■□□□□ 0.12
SMC5Q08204 PST2YDR032C 597 nt15.57■□□□□ 0.08
SMC5Q08204 GAR1YHR089C 618 nt15.55■□□□□ 0.08
SMC5Q08204 DEP1YAL013W 1218 nt15.41■□□□□ 0.06
SMC5Q08204 URN1YPR152C 1398 nt15.38■□□□□ 0.05
SMC5Q08204 RPN10YHR200W 807 nt15.25■□□□□ 0.03
SMC5Q08204 YNL208WYNL208W 600 nt15.23■□□□□ 0.03
SMC5Q08204 OPI9YLR338W 858 nt15.12■□□□□ 0.01
SMC5Q08204 YKL097CYKL097C 411 nt15.08■□□□□ 0
SMC5Q08204 TIR1YER011W 765 nt15.02■□□□□ -0
SMC5Q08204 PUT4YOR348C 1884 nt15□□□□□ -0.01
SMC5Q08204 SAH1YER043C 1350 nt14.96□□□□□ -0.02
SMC5Q08204 SSA3YBL075C 1950 nt14.91□□□□□ -0.02
SMC5Q08204 SHU1YHL006C 453 nt14.89□□□□□ -0.03
SMC5Q08204 ARE1YCR048W 1833 nt14.79□□□□□ -0.04
SMC5Q08204 SSA1YAL005C 1929 nt14.77□□□□□ -0.04
SMC5Q08204 PUN1YLR414C 792 nt14.71□□□□□ -0.05
SMC5Q08204 YJR018WYJR018W 363 nt14.7□□□□□ -0.06
SMC5Q08204 YHR049C-AYHR049C-A 297 nt14.62□□□□□ -0.07
SMC5Q08204 YAL037C-BYAL037C-B 975 nt14.59□□□□□ -0.07
SMC5Q08204 POA1YBR022W 534 nt14.56□□□□□ -0.08
SMC5Q08204 RPP2BYDR382W 333 nt14.5□□□□□ -0.09
SMC5Q08204 SRB2YHR041C 633 nt14.5□□□□□ -0.09
SMC5Q08204 PTC2YER089C 1395 nt14.47□□□□□ -0.09
SMC5Q08204 YJR120WYJR120W 351 nt14.44□□□□□ -0.1
SMC5Q08204 YGR021WYGR021W 873 nt14.4□□□□□ -0.1
SMC5Q08204 YOR139CYOR139C 393 nt14.4□□□□□ -0.1
SMC5Q08204 WWM1YFL010C 636 nt14.37□□□□□ -0.11
SMC5Q08204 BUD23YCR047C 828 nt14.32□□□□□ -0.12
SMC5Q08204 HOM6YJR139C 1080 nt14.31□□□□□ -0.12
SMC5Q08204 NPL3YDR432W 1245 nt14.3□□□□□ -0.12
SMC5Q08204 NAB2YGL122C 1578 nt14.28□□□□□ -0.12
SMC5Q08204 MNP1YGL068W 585 nt14.25□□□□□ -0.13
SMC5Q08204 BSC6YOL137W 1494 nt14.21□□□□□ -0.13
SMC5Q08204 BDH2YAL061W 1254 nt14.21□□□□□ -0.13
SMC5Q08204 INM2YDR287W 879 nt14.17□□□□□ -0.14
SMC5Q08204 YFL021C-AYFL021C-A 855 nt14.17□□□□□ -0.14
SMC5Q08204 YOL037CYOL037C 354 nt14.14□□□□□ -0.15
SMC5Q08204 DAL1YIR027C 1383 nt14.12□□□□□ -0.15
SMC5Q08204 RKM5YLR137W 1104 nt14.11□□□□□ -0.15
SMC5Q08204 FPR4YLR449W 1179 nt14.1□□□□□ -0.15
SMC5Q08204 LSM3YLR438C-A 270 nt14.07□□□□□ -0.16
SMC5Q08204 FIS1YIL065C 468 nt14.05□□□□□ -0.16
SMC5Q08204 YBL100CYBL100C 315 nt14.05□□□□□ -0.16
SMC5Q08204 PHO4YFR034C 939 nt13.97□□□□□ -0.17
SMC5Q08204 TRM9YML014W 840 nt13.92□□□□□ -0.18
SMC5Q08204 FUN26YAL022C 1554 nt13.88□□□□□ -0.19
SMC5Q08204 tM(CAU)CtM(CAU)C 72 nt13.84□□□□□ -0.19
SMC5Q08204 IMT4tM(CAU)E 72 nt13.84□□□□□ -0.19
SMC5Q08204 IMT3tM(CAU)J3 72 nt13.84□□□□□ -0.19
SMC5Q08204 IMT1tM(CAU)O1 72 nt13.84□□□□□ -0.19
SMC5Q08204 IMT2tM(CAU)P 72 nt13.84□□□□□ -0.19
SMC5Q08204 YLR281CYLR281C 468 nt13.77□□□□□ -0.21
SMC5Q08204 CCT6YDR188W 1641 nt13.75□□□□□ -0.21
SMC5Q08204 PUS2YGL063W 1113 nt13.71□□□□□ -0.21
SMC5Q08204 WHI5YOR083W 888 nt13.7□□□□□ -0.22
SMC5Q08204 ALF1YNL148C 765 nt13.68□□□□□ -0.22
SMC5Q08204 SUF2tP(AGG)C 72 nt13.65□□□□□ -0.22
SMC5Q08204 SUF10tP(AGG)N 72 nt13.65□□□□□ -0.22
SMC5Q08204 YPS1YLR120C 1710 nt13.62□□□□□ -0.23
SMC5Q08204 YDR095CYDR095C 411 nt13.57□□□□□ -0.24
SMC5Q08204 YLR154C-GYLR154C-G 150 nt13.55□□□□□ -0.24
SMC5Q08204 YHR165W-AYHR165W-A 312 nt13.48□□□□□ -0.25
SMC5Q08204 IMP2'YIL154C 1041 nt13.46□□□□□ -0.25
Retrieved 100 of 7,029 protein–RNA pairs in 13.2 ms