Protein–RNA interactions for Protein: P46970

NMD5, Nonsense-mediated mRNA decay protein 5, yeastyeast

Predictions only

Length 1,048 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NMD5P46970 NSR1YGR159C 1245 nt21.07■□□□□ 0.96
NMD5P46970 YML009W-BYML009W-B 477 nt20.98■□□□□ 0.95
NMD5P46970 NOP1YDL014W 984 nt20.15■□□□□ 0.82
NMD5P46970 MDJ1YFL016C 1536 nt19.15■□□□□ 0.66
NMD5P46970 YKL036CYKL036C 393 nt18.32■□□□□ 0.52
NMD5P46970 SRX1YKL086W 384 nt17.65■□□□□ 0.42
NMD5P46970 Q0297Q0297 156 nt17.57■□□□□ 0.4
NMD5P46970 YJL027CYJL027C 417 nt17.54■□□□□ 0.4
NMD5P46970 DBP2YNL112W 1641 nt16.83■□□□□ 0.28
NMD5P46970 YCR051WYCR051W 669 nt16.75■□□□□ 0.27
NMD5P46970 SCS3YGL126W 1143 nt16.56■□□□□ 0.24
NMD5P46970 YBR190WYBR190W 312 nt16.32■□□□□ 0.2
NMD5P46970 TRN1tP(UGG)A 72 nt16.2■□□□□ 0.18
NMD5P46970 SUF9tP(UGG)F 72 nt16.2■□□□□ 0.18
NMD5P46970 SUF8tP(UGG)H 72 nt16.2■□□□□ 0.18
NMD5P46970 tP(UGG)LtP(UGG)L 72 nt16.2■□□□□ 0.18
NMD5P46970 SUF7tP(UGG)M 72 nt16.2■□□□□ 0.18
NMD5P46970 tP(UGG)N1tP(UGG)N1 72 nt16.2■□□□□ 0.18
NMD5P46970 tP(UGG)N2tP(UGG)N2 72 nt16.2■□□□□ 0.18
NMD5P46970 tP(UGG)O1tP(UGG)O1 72 nt16.2■□□□□ 0.18
NMD5P46970 SUF11tP(UGG)O2 72 nt16.2■□□□□ 0.18
NMD5P46970 CCC1YLR220W 969 nt16.06■□□□□ 0.16
NMD5P46970 RTC3YHR087W 336 nt15.96■□□□□ 0.15
NMD5P46970 YOL085CYOL085C 342 nt15.92■□□□□ 0.14
NMD5P46970 RPP1BYDL130W 321 nt15.78■□□□□ 0.12
NMD5P46970 PKP1YIL042C 1185 nt15.78■□□□□ 0.12
NMD5P46970 RVS167YDR388W 1449 nt15.6■□□□□ 0.09
NMD5P46970 SCJ1YMR214W 1134 nt15.6■□□□□ 0.09
NMD5P46970 tP(UGG)O3tP(UGG)O3 72 nt15.21■□□□□ 0.03
NMD5P46970 PUT4YOR348C 1884 nt15.18■□□□□ 0.02
NMD5P46970 PET122YER153C 765 nt15.17■□□□□ 0.02
NMD5P46970 SHR5YOL110W 714 nt15.02■□□□□ -0
NMD5P46970 SSA3YBL075C 1950 nt15.01□□□□□ -0.01
NMD5P46970 URN1YPR152C 1398 nt14.85□□□□□ -0.03
NMD5P46970 SCR1SCR1 522 nt14.82□□□□□ -0.04
NMD5P46970 ARE1YCR048W 1833 nt14.82□□□□□ -0.04
NMD5P46970 DEP1YAL013W 1218 nt14.78□□□□□ -0.04
NMD5P46970 SAH1YER043C 1350 nt14.72□□□□□ -0.05
NMD5P46970 ATS1YAL020C 1002 nt14.69□□□□□ -0.06
NMD5P46970 RRN5YLR141W 1092 nt14.68□□□□□ -0.06
NMD5P46970 OPI9YLR338W 858 nt14.67□□□□□ -0.06
NMD5P46970 YDJ1YNL064C 1230 nt14.67□□□□□ -0.06
NMD5P46970 POA1YBR022W 534 nt14.66□□□□□ -0.06
NMD5P46970 YHR049C-AYHR049C-A 297 nt14.59□□□□□ -0.07
NMD5P46970 GAR1YHR089C 618 nt14.46□□□□□ -0.09
NMD5P46970 RPN10YHR200W 807 nt14.45□□□□□ -0.1
NMD5P46970 YNL208WYNL208W 600 nt14.43□□□□□ -0.1
NMD5P46970 BSC6YOL137W 1494 nt14.4□□□□□ -0.1
NMD5P46970 YER088W-BYER088W-B 147 nt14.4□□□□□ -0.1
NMD5P46970 RSB1YOR049C 1065 nt14.25□□□□□ -0.13
NMD5P46970 BUD23YCR047C 828 nt14.21□□□□□ -0.13
NMD5P46970 PUN1YLR414C 792 nt14.2□□□□□ -0.14
NMD5P46970 PTC2YER089C 1395 nt14.16□□□□□ -0.14
NMD5P46970 YJR018WYJR018W 363 nt14.11□□□□□ -0.15
NMD5P46970 SPT5YML010W 3192 nt14.08□□□□□ -0.15
NMD5P46970 NAB2YGL122C 1578 nt13.98□□□□□ -0.17
NMD5P46970 TIR1YER011W 765 nt13.97□□□□□ -0.17
NMD5P46970 SSA1YAL005C 1929 nt13.94□□□□□ -0.18
NMD5P46970 YJR120WYJR120W 351 nt13.92□□□□□ -0.18
NMD5P46970 FIS1YIL065C 468 nt13.82□□□□□ -0.2
NMD5P46970 DAL1YIR027C 1383 nt13.74□□□□□ -0.21
NMD5P46970 FPR4YLR449W 1179 nt13.73□□□□□ -0.21
NMD5P46970 SRB2YHR041C 633 nt13.72□□□□□ -0.21
NMD5P46970 RPP2BYDR382W 333 nt13.68□□□□□ -0.22
NMD5P46970 PST2YDR032C 597 nt13.67□□□□□ -0.22
NMD5P46970 SSA4YER103W 1929 nt13.66□□□□□ -0.22
NMD5P46970 PHO4YFR034C 939 nt13.64□□□□□ -0.23
NMD5P46970 INM2YDR287W 879 nt13.6□□□□□ -0.23
NMD5P46970 MEP2YNL142W 1500 nt13.54□□□□□ -0.24
NMD5P46970 YPS1YLR120C 1710 nt13.5□□□□□ -0.25
NMD5P46970 YBL100CYBL100C 315 nt13.48□□□□□ -0.25
NMD5P46970 BDH2YAL061W 1254 nt13.4□□□□□ -0.26
NMD5P46970 DCW1YKL046C 1350 nt13.39□□□□□ -0.27
NMD5P46970 YHR165W-AYHR165W-A 312 nt13.35□□□□□ -0.27
NMD5P46970 YDR095CYDR095C 411 nt13.34□□□□□ -0.27
NMD5P46970 WWM1YFL010C 636 nt13.34□□□□□ -0.27
NMD5P46970 FUN26YAL022C 1554 nt13.32□□□□□ -0.28
NMD5P46970 SHU1YHL006C 453 nt13.23□□□□□ -0.29
NMD5P46970 BDF1YLR399C 2061 nt13.21□□□□□ -0.29
NMD5P46970 TRM9YML014W 840 nt13.18□□□□□ -0.3
NMD5P46970 YAL037C-BYAL037C-B 975 nt13.17□□□□□ -0.3
NMD5P46970 EMI2YDR516C 1503 nt13.14□□□□□ -0.31
NMD5P46970 ALF1YNL148C 765 nt13.14□□□□□ -0.31
NMD5P46970 PTP1YDL230W 1008 nt13.13□□□□□ -0.31
NMD5P46970 LSM3YLR438C-A 270 nt13.12□□□□□ -0.31
NMD5P46970 CAC2YML102W 1407 nt13.11□□□□□ -0.31
NMD5P46970 CCT6YDR188W 1641 nt13.1□□□□□ -0.31
NMD5P46970 RPP2AYOL039W 321 nt13.08□□□□□ -0.32
NMD5P46970 HOM6YJR139C 1080 nt13.07□□□□□ -0.32
NMD5P46970 YFL021C-AYFL021C-A 855 nt13.06□□□□□ -0.32
NMD5P46970 YGR021WYGR021W 873 nt13.06□□□□□ -0.32
NMD5P46970 YBR220CYBR220C 1683 nt13.03□□□□□ -0.32
NMD5P46970 MNP1YGL068W 585 nt13.02□□□□□ -0.33
NMD5P46970 YDL221WYDL221W 552 nt13.01□□□□□ -0.33
NMD5P46970 TAT1YBR069C 1860 nt13.01□□□□□ -0.33
NMD5P46970 SIS1YNL007C 1059 nt12.99□□□□□ -0.33
NMD5P46970 YMR090WYMR090W 684 nt12.97□□□□□ -0.33
NMD5P46970 SUF2tP(AGG)C 72 nt12.94□□□□□ -0.34
NMD5P46970 SUF10tP(AGG)N 72 nt12.94□□□□□ -0.34
NMD5P46970 SDH1YKL148C 1923 nt12.94□□□□□ -0.34
Retrieved 100 of 7,029 protein–RNA pairs in 12.5 ms