Protein–RNA interactions for Protein: Q08957

AFT2, Iron-regulated transcriptional activator AFT2, yeastyeast

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
AFT2Q08957 NSR1YGR159C 1245 nt22.5■■□□□ 1.19
AFT2Q08957 YML009W-BYML009W-B 477 nt22.45■■□□□ 1.18
AFT2Q08957 NOP1YDL014W 984 nt21.66■■□□□ 1.06
AFT2Q08957 MDJ1YFL016C 1536 nt20.26■□□□□ 0.83
AFT2Q08957 YKL036CYKL036C 393 nt19.82■□□□□ 0.76
AFT2Q08957 SRX1YKL086W 384 nt18.99■□□□□ 0.63
AFT2Q08957 Q0297Q0297 156 nt18.97■□□□□ 0.63
AFT2Q08957 YJL027CYJL027C 417 nt18.61■□□□□ 0.57
AFT2Q08957 YCR051WYCR051W 669 nt17.98■□□□□ 0.47
AFT2Q08957 SCS3YGL126W 1143 nt17.98■□□□□ 0.47
AFT2Q08957 DBP2YNL112W 1641 nt17.89■□□□□ 0.45
AFT2Q08957 TRN1tP(UGG)A 72 nt17.34■□□□□ 0.37
AFT2Q08957 SUF9tP(UGG)F 72 nt17.34■□□□□ 0.37
AFT2Q08957 SUF8tP(UGG)H 72 nt17.34■□□□□ 0.37
AFT2Q08957 tP(UGG)LtP(UGG)L 72 nt17.34■□□□□ 0.37
AFT2Q08957 SUF7tP(UGG)M 72 nt17.34■□□□□ 0.37
AFT2Q08957 tP(UGG)N1tP(UGG)N1 72 nt17.34■□□□□ 0.37
AFT2Q08957 tP(UGG)N2tP(UGG)N2 72 nt17.34■□□□□ 0.37
AFT2Q08957 tP(UGG)O1tP(UGG)O1 72 nt17.34■□□□□ 0.37
AFT2Q08957 SUF11tP(UGG)O2 72 nt17.34■□□□□ 0.37
AFT2Q08957 YBR190WYBR190W 312 nt17.28■□□□□ 0.36
AFT2Q08957 YOL085CYOL085C 342 nt17.23■□□□□ 0.35
AFT2Q08957 CCC1YLR220W 969 nt17.14■□□□□ 0.33
AFT2Q08957 RPP1BYDL130W 321 nt17.01■□□□□ 0.31
AFT2Q08957 PKP1YIL042C 1185 nt17.01■□□□□ 0.31
AFT2Q08957 RTC3YHR087W 336 nt16.86■□□□□ 0.29
AFT2Q08957 SCJ1YMR214W 1134 nt16.63■□□□□ 0.25
AFT2Q08957 RVS167YDR388W 1449 nt16.6■□□□□ 0.25
AFT2Q08957 PET122YER153C 765 nt16.32■□□□□ 0.2
AFT2Q08957 tP(UGG)O3tP(UGG)O3 72 nt16.31■□□□□ 0.2
AFT2Q08957 SHR5YOL110W 714 nt16.03■□□□□ 0.16
AFT2Q08957 ATS1YAL020C 1002 nt16■□□□□ 0.15
AFT2Q08957 SCR1SCR1 522 nt15.98■□□□□ 0.15
AFT2Q08957 PUT4YOR348C 1884 nt15.95■□□□□ 0.14
AFT2Q08957 RRN5YLR141W 1092 nt15.81■□□□□ 0.12
AFT2Q08957 YDJ1YNL064C 1230 nt15.76■□□□□ 0.11
AFT2Q08957 URN1YPR152C 1398 nt15.74■□□□□ 0.11
AFT2Q08957 DEP1YAL013W 1218 nt15.69■□□□□ 0.1
AFT2Q08957 ARE1YCR048W 1833 nt15.6■□□□□ 0.09
AFT2Q08957 OPI9YLR338W 858 nt15.56■□□□□ 0.08
AFT2Q08957 SAH1YER043C 1350 nt15.55■□□□□ 0.08
AFT2Q08957 YER088W-BYER088W-B 147 nt15.51■□□□□ 0.07
AFT2Q08957 GAR1YHR089C 618 nt15.46■□□□□ 0.07
AFT2Q08957 SSA3YBL075C 1950 nt15.43■□□□□ 0.06
AFT2Q08957 POA1YBR022W 534 nt15.4■□□□□ 0.06
AFT2Q08957 RSB1YOR049C 1065 nt15.37■□□□□ 0.05
AFT2Q08957 RPN10YHR200W 807 nt15.36■□□□□ 0.05
AFT2Q08957 YNL208WYNL208W 600 nt15.36■□□□□ 0.05
AFT2Q08957 YHR049C-AYHR049C-A 297 nt15.35■□□□□ 0.05
AFT2Q08957 BSC6YOL137W 1494 nt15.11■□□□□ 0.01
AFT2Q08957 PUN1YLR414C 792 nt15.06■□□□□ 0
AFT2Q08957 YJR018WYJR018W 363 nt14.99□□□□□ -0.01
AFT2Q08957 PTC2YER089C 1395 nt14.97□□□□□ -0.01
AFT2Q08957 TIR1YER011W 765 nt14.96□□□□□ -0.01
AFT2Q08957 BUD23YCR047C 828 nt14.94□□□□□ -0.02
AFT2Q08957 PST2YDR032C 597 nt14.89□□□□□ -0.03
AFT2Q08957 SSA1YAL005C 1929 nt14.88□□□□□ -0.03
AFT2Q08957 YJR120WYJR120W 351 nt14.83□□□□□ -0.04
AFT2Q08957 NAB2YGL122C 1578 nt14.77□□□□□ -0.04
AFT2Q08957 SPT5YML010W 3192 nt14.69□□□□□ -0.06
AFT2Q08957 SRB2YHR041C 633 nt14.67□□□□□ -0.06
AFT2Q08957 FIS1YIL065C 468 nt14.62□□□□□ -0.07
AFT2Q08957 RPP2BYDR382W 333 nt14.55□□□□□ -0.08
AFT2Q08957 DAL1YIR027C 1383 nt14.55□□□□□ -0.08
AFT2Q08957 FPR4YLR449W 1179 nt14.48□□□□□ -0.09
AFT2Q08957 INM2YDR287W 879 nt14.45□□□□□ -0.1
AFT2Q08957 PHO4YFR034C 939 nt14.44□□□□□ -0.1
AFT2Q08957 SHU1YHL006C 453 nt14.35□□□□□ -0.11
AFT2Q08957 YBL100CYBL100C 315 nt14.31□□□□□ -0.12
AFT2Q08957 WWM1YFL010C 636 nt14.3□□□□□ -0.12
AFT2Q08957 BDH2YAL061W 1254 nt14.29□□□□□ -0.12
AFT2Q08957 YPS1YLR120C 1710 nt14.24□□□□□ -0.13
AFT2Q08957 MEP2YNL142W 1500 nt14.2□□□□□ -0.14
AFT2Q08957 YAL037C-BYAL037C-B 975 nt14.2□□□□□ -0.14
AFT2Q08957 SSA4YER103W 1929 nt14.17□□□□□ -0.14
AFT2Q08957 FUN26YAL022C 1554 nt14.15□□□□□ -0.14
AFT2Q08957 YDR095CYDR095C 411 nt14.11□□□□□ -0.15
AFT2Q08957 YKL097CYKL097C 411 nt14.11□□□□□ -0.15
AFT2Q08957 HOM6YJR139C 1080 nt14.07□□□□□ -0.16
AFT2Q08957 YGR021WYGR021W 873 nt14.06□□□□□ -0.16
AFT2Q08957 LSM3YLR438C-A 270 nt14.05□□□□□ -0.16
AFT2Q08957 YHR165W-AYHR165W-A 312 nt14.04□□□□□ -0.16
AFT2Q08957 TRM9YML014W 840 nt14.03□□□□□ -0.16
AFT2Q08957 DCW1YKL046C 1350 nt14.03□□□□□ -0.16
AFT2Q08957 YFL021C-AYFL021C-A 855 nt14.01□□□□□ -0.17
AFT2Q08957 MNP1YGL068W 585 nt13.99□□□□□ -0.17
AFT2Q08957 CCT6YDR188W 1641 nt13.94□□□□□ -0.18
AFT2Q08957 ALF1YNL148C 765 nt13.92□□□□□ -0.18
AFT2Q08957 PTP1YDL230W 1008 nt13.89□□□□□ -0.19
AFT2Q08957 RKM5YLR137W 1104 nt13.85□□□□□ -0.19
AFT2Q08957 RPP2AYOL039W 321 nt13.82□□□□□ -0.2
AFT2Q08957 CAC2YML102W 1407 nt13.81□□□□□ -0.2
AFT2Q08957 SIS1YNL007C 1059 nt13.8□□□□□ -0.2
AFT2Q08957 EMI2YDR516C 1503 nt13.8□□□□□ -0.2
AFT2Q08957 SUF2tP(AGG)C 72 nt13.76□□□□□ -0.21
AFT2Q08957 SUF10tP(AGG)N 72 nt13.76□□□□□ -0.21
AFT2Q08957 BDF1YLR399C 2061 nt13.69□□□□□ -0.22
AFT2Q08957 YDL221WYDL221W 552 nt13.68□□□□□ -0.22
AFT2Q08957 YOR139CYOR139C 393 nt13.68□□□□□ -0.22
AFT2Q08957 YBR220CYBR220C 1683 nt13.64□□□□□ -0.23
Retrieved 100 of 7,029 protein–RNA pairs in 15.7 ms