Protein–RNA interactions for Protein: P53840

TOF1, Topoisomerase 1-associated factor 1, yeastyeast

Predictions only

Length 1,238 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TOF1P53840 YML009W-BYML009W-B 477 nt22.5■■□□□ 1.19
TOF1P53840 NSR1YGR159C 1245 nt22.34■■□□□ 1.17
TOF1P53840 NOP1YDL014W 984 nt21.87■■□□□ 1.09
TOF1P53840 YKL036CYKL036C 393 nt20.24■□□□□ 0.83
TOF1P53840 MDJ1YFL016C 1536 nt19.81■□□□□ 0.76
TOF1P53840 Q0297Q0297 156 nt19.2■□□□□ 0.66
TOF1P53840 SRX1YKL086W 384 nt19.14■□□□□ 0.65
TOF1P53840 YJL027CYJL027C 417 nt18.89■□□□□ 0.61
TOF1P53840 SCS3YGL126W 1143 nt18.46■□□□□ 0.55
TOF1P53840 YCR051WYCR051W 669 nt18.14■□□□□ 0.49
TOF1P53840 DBP2YNL112W 1641 nt17.58■□□□□ 0.41
TOF1P53840 YOL085CYOL085C 342 nt17.56■□□□□ 0.4
TOF1P53840 TRN1tP(UGG)A 72 nt17.3■□□□□ 0.36
TOF1P53840 SUF9tP(UGG)F 72 nt17.3■□□□□ 0.36
TOF1P53840 SUF8tP(UGG)H 72 nt17.3■□□□□ 0.36
TOF1P53840 tP(UGG)LtP(UGG)L 72 nt17.3■□□□□ 0.36
TOF1P53840 SUF7tP(UGG)M 72 nt17.3■□□□□ 0.36
TOF1P53840 tP(UGG)N1tP(UGG)N1 72 nt17.3■□□□□ 0.36
TOF1P53840 tP(UGG)N2tP(UGG)N2 72 nt17.3■□□□□ 0.36
TOF1P53840 tP(UGG)O1tP(UGG)O1 72 nt17.3■□□□□ 0.36
TOF1P53840 SUF11tP(UGG)O2 72 nt17.3■□□□□ 0.36
TOF1P53840 PKP1YIL042C 1185 nt17.27■□□□□ 0.36
TOF1P53840 RPP1BYDL130W 321 nt17.22■□□□□ 0.35
TOF1P53840 CCC1YLR220W 969 nt17.09■□□□□ 0.33
TOF1P53840 YBR190WYBR190W 312 nt16.88■□□□□ 0.29
TOF1P53840 ATS1YAL020C 1002 nt16.52■□□□□ 0.24
TOF1P53840 RTC3YHR087W 336 nt16.47■□□□□ 0.23
TOF1P53840 PET122YER153C 765 nt16.46■□□□□ 0.23
TOF1P53840 SCJ1YMR214W 1134 nt16.46■□□□□ 0.23
TOF1P53840 RVS167YDR388W 1449 nt16.45■□□□□ 0.22
TOF1P53840 tP(UGG)O3tP(UGG)O3 72 nt16.37■□□□□ 0.21
TOF1P53840 SCR1SCR1 522 nt16.24■□□□□ 0.19
TOF1P53840 RRN5YLR141W 1092 nt15.99■□□□□ 0.15
TOF1P53840 SHR5YOL110W 714 nt15.93■□□□□ 0.14
TOF1P53840 YDJ1YNL064C 1230 nt15.84■□□□□ 0.13
TOF1P53840 YER088W-BYER088W-B 147 nt15.68■□□□□ 0.1
TOF1P53840 RSB1YOR049C 1065 nt15.64■□□□□ 0.09
TOF1P53840 GAR1YHR089C 618 nt15.47■□□□□ 0.07
TOF1P53840 DEP1YAL013W 1218 nt15.46■□□□□ 0.07
TOF1P53840 URN1YPR152C 1398 nt15.46■□□□□ 0.07
TOF1P53840 PUT4YOR348C 1884 nt15.37■□□□□ 0.05
TOF1P53840 PST2YDR032C 597 nt15.31■□□□□ 0.04
TOF1P53840 OPI9YLR338W 858 nt15.24■□□□□ 0.03
TOF1P53840 YNL208WYNL208W 600 nt15.22■□□□□ 0.03
TOF1P53840 RPN10YHR200W 807 nt15.2■□□□□ 0.02
TOF1P53840 SAH1YER043C 1350 nt15.13■□□□□ 0.01
TOF1P53840 ARE1YCR048W 1833 nt15.06■□□□□ 0
TOF1P53840 TIR1YER011W 765 nt14.95□□□□□ -0.02
TOF1P53840 SSA3YBL075C 1950 nt14.93□□□□□ -0.02
TOF1P53840 POA1YBR022W 534 nt14.87□□□□□ -0.03
TOF1P53840 YHR049C-AYHR049C-A 297 nt14.85□□□□□ -0.03
TOF1P53840 SSA1YAL005C 1929 nt14.79□□□□□ -0.04
TOF1P53840 PUN1YLR414C 792 nt14.78□□□□□ -0.04
TOF1P53840 YJR018WYJR018W 363 nt14.75□□□□□ -0.05
TOF1P53840 SHU1YHL006C 453 nt14.68□□□□□ -0.06
TOF1P53840 YKL097CYKL097C 411 nt14.68□□□□□ -0.06
TOF1P53840 BSC6YOL137W 1494 nt14.61□□□□□ -0.07
TOF1P53840 PTC2YER089C 1395 nt14.6□□□□□ -0.07
TOF1P53840 SRB2YHR041C 633 nt14.6□□□□□ -0.07
TOF1P53840 YJR120WYJR120W 351 nt14.6□□□□□ -0.07
TOF1P53840 BUD23YCR047C 828 nt14.48□□□□□ -0.09
TOF1P53840 RPP2BYDR382W 333 nt14.43□□□□□ -0.1
TOF1P53840 YAL037C-BYAL037C-B 975 nt14.43□□□□□ -0.1
TOF1P53840 NAB2YGL122C 1578 nt14.39□□□□□ -0.11
TOF1P53840 WWM1YFL010C 636 nt14.32□□□□□ -0.12
TOF1P53840 FIS1YIL065C 468 nt14.24□□□□□ -0.13
TOF1P53840 DAL1YIR027C 1383 nt14.22□□□□□ -0.13
TOF1P53840 INM2YDR287W 879 nt14.21□□□□□ -0.13
TOF1P53840 YGR021WYGR021W 873 nt14.21□□□□□ -0.13
TOF1P53840 HOM6YJR139C 1080 nt14.21□□□□□ -0.13
TOF1P53840 BDH2YAL061W 1254 nt14.18□□□□□ -0.14
TOF1P53840 FPR4YLR449W 1179 nt14.16□□□□□ -0.14
TOF1P53840 MNP1YGL068W 585 nt14.14□□□□□ -0.15
TOF1P53840 YOR139CYOR139C 393 nt14.14□□□□□ -0.15
TOF1P53840 PHO4YFR034C 939 nt14.1□□□□□ -0.15
TOF1P53840 YBL100CYBL100C 315 nt14.08□□□□□ -0.16
TOF1P53840 SPT5YML010W 3192 nt14.08□□□□□ -0.16
TOF1P53840 YFL021C-AYFL021C-A 855 nt14.07□□□□□ -0.16
TOF1P53840 LSM3YLR438C-A 270 nt14.01□□□□□ -0.17
TOF1P53840 RKM5YLR137W 1104 nt13.99□□□□□ -0.17
TOF1P53840 NPL3YDR432W 1245 nt13.95□□□□□ -0.18
TOF1P53840 FUN26YAL022C 1554 nt13.93□□□□□ -0.18
TOF1P53840 YOL037CYOL037C 354 nt13.9□□□□□ -0.18
TOF1P53840 TRM9YML014W 840 nt13.89□□□□□ -0.19
TOF1P53840 YPS1YLR120C 1710 nt13.81□□□□□ -0.2
TOF1P53840 CCT6YDR188W 1641 nt13.78□□□□□ -0.2
TOF1P53840 YDR095CYDR095C 411 nt13.74□□□□□ -0.21
TOF1P53840 MEP2YNL142W 1500 nt13.74□□□□□ -0.21
TOF1P53840 SSA4YER103W 1929 nt13.69□□□□□ -0.22
TOF1P53840 ALF1YNL148C 765 nt13.69□□□□□ -0.22
TOF1P53840 YHR165W-AYHR165W-A 312 nt13.64□□□□□ -0.23
TOF1P53840 SUF2tP(AGG)C 72 nt13.61□□□□□ -0.23
TOF1P53840 SUF10tP(AGG)N 72 nt13.61□□□□□ -0.23
TOF1P53840 YLR281CYLR281C 468 nt13.6□□□□□ -0.23
TOF1P53840 tM(CAU)CtM(CAU)C 72 nt13.58□□□□□ -0.24
TOF1P53840 IMT4tM(CAU)E 72 nt13.58□□□□□ -0.24
TOF1P53840 IMT3tM(CAU)J3 72 nt13.58□□□□□ -0.24
TOF1P53840 IMT1tM(CAU)O1 72 nt13.58□□□□□ -0.24
TOF1P53840 IMT2tM(CAU)P 72 nt13.58□□□□□ -0.24
TOF1P53840 WHI5YOR083W 888 nt13.54□□□□□ -0.24
Retrieved 100 of 7,029 protein–RNA pairs in 13.3 ms