Protein–RNA interactions for Protein: P32643

TMT1, Trans-aconitate 3-methyltransferase, yeastyeast

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TMT1P32643 YML009W-BYML009W-B 477 nt22.39■■□□□ 1.17
TMT1P32643 NSR1YGR159C 1245 nt22.01■■□□□ 1.11
TMT1P32643 NOP1YDL014W 984 nt21.82■■□□□ 1.08
TMT1P32643 YKL036CYKL036C 393 nt20.36■□□□□ 0.85
TMT1P32643 MDJ1YFL016C 1536 nt19.39■□□□□ 0.69
TMT1P32643 Q0297Q0297 156 nt19.17■□□□□ 0.66
TMT1P32643 YJL027CYJL027C 417 nt19.06■□□□□ 0.64
TMT1P32643 SRX1YKL086W 384 nt19.06■□□□□ 0.64
TMT1P32643 SCS3YGL126W 1143 nt18.65■□□□□ 0.58
TMT1P32643 YCR051WYCR051W 669 nt18.16■□□□□ 0.5
TMT1P32643 YOL085CYOL085C 342 nt17.64■□□□□ 0.41
TMT1P32643 PKP1YIL042C 1185 nt17.39■□□□□ 0.37
TMT1P32643 RPP1BYDL130W 321 nt17.22■□□□□ 0.35
TMT1P32643 DBP2YNL112W 1641 nt17.21■□□□□ 0.35
TMT1P32643 TRN1tP(UGG)A 72 nt17.1■□□□□ 0.33
TMT1P32643 SUF9tP(UGG)F 72 nt17.1■□□□□ 0.33
TMT1P32643 SUF8tP(UGG)H 72 nt17.1■□□□□ 0.33
TMT1P32643 tP(UGG)LtP(UGG)L 72 nt17.1■□□□□ 0.33
TMT1P32643 SUF7tP(UGG)M 72 nt17.1■□□□□ 0.33
TMT1P32643 tP(UGG)N1tP(UGG)N1 72 nt17.1■□□□□ 0.33
TMT1P32643 tP(UGG)N2tP(UGG)N2 72 nt17.1■□□□□ 0.33
TMT1P32643 tP(UGG)O1tP(UGG)O1 72 nt17.1■□□□□ 0.33
TMT1P32643 SUF11tP(UGG)O2 72 nt17.1■□□□□ 0.33
TMT1P32643 CCC1YLR220W 969 nt17.01■□□□□ 0.31
TMT1P32643 ATS1YAL020C 1002 nt16.75■□□□□ 0.27
TMT1P32643 SCJ1YMR214W 1134 nt16.74■□□□□ 0.27
TMT1P32643 PET122YER153C 765 nt16.45■□□□□ 0.22
TMT1P32643 YBR190WYBR190W 312 nt16.43■□□□□ 0.22
TMT1P32643 SCR1SCR1 522 nt16.3■□□□□ 0.2
TMT1P32643 tP(UGG)O3tP(UGG)O3 72 nt16.28■□□□□ 0.2
TMT1P32643 RVS167YDR388W 1449 nt16.23■□□□□ 0.19
TMT1P32643 RTC3YHR087W 336 nt16.13■□□□□ 0.17
TMT1P32643 RRN5YLR141W 1092 nt16■□□□□ 0.15
TMT1P32643 RSB1YOR049C 1065 nt15.74■□□□□ 0.11
TMT1P32643 YDJ1YNL064C 1230 nt15.72■□□□□ 0.11
TMT1P32643 SHR5YOL110W 714 nt15.71■□□□□ 0.11
TMT1P32643 YER088W-BYER088W-B 147 nt15.68■□□□□ 0.1
TMT1P32643 PST2YDR032C 597 nt15.46■□□□□ 0.07
TMT1P32643 GAR1YHR089C 618 nt15.38■□□□□ 0.05
TMT1P32643 DEP1YAL013W 1218 nt15.26■□□□□ 0.03
TMT1P32643 URN1YPR152C 1398 nt15.16■□□□□ 0.02
TMT1P32643 YNL208WYNL208W 600 nt14.99□□□□□ -0.01
TMT1P32643 YKL097CYKL097C 411 nt14.97□□□□□ -0.01
TMT1P32643 RPN10YHR200W 807 nt14.95□□□□□ -0.02
TMT1P32643 OPI9YLR338W 858 nt14.87□□□□□ -0.03
TMT1P32643 PUT4YOR348C 1884 nt14.86□□□□□ -0.03
TMT1P32643 TIR1YER011W 765 nt14.84□□□□□ -0.03
TMT1P32643 SHU1YHL006C 453 nt14.8□□□□□ -0.04
TMT1P32643 SAH1YER043C 1350 nt14.75□□□□□ -0.05
TMT1P32643 SSA1YAL005C 1929 nt14.62□□□□□ -0.07
TMT1P32643 ARE1YCR048W 1833 nt14.59□□□□□ -0.07
TMT1P32643 YAL037C-BYAL037C-B 975 nt14.54□□□□□ -0.08
TMT1P32643 YJR018WYJR018W 363 nt14.47□□□□□ -0.09
TMT1P32643 SRB2YHR041C 633 nt14.44□□□□□ -0.1
TMT1P32643 POA1YBR022W 534 nt14.44□□□□□ -0.1
TMT1P32643 PUN1YLR414C 792 nt14.43□□□□□ -0.1
TMT1P32643 YHR049C-AYHR049C-A 297 nt14.4□□□□□ -0.1
TMT1P32643 YOR139CYOR139C 393 nt14.34□□□□□ -0.11
TMT1P32643 YJR120WYJR120W 351 nt14.29□□□□□ -0.12
TMT1P32643 PTC2YER089C 1395 nt14.26□□□□□ -0.13
TMT1P32643 WWM1YFL010C 636 nt14.25□□□□□ -0.13
TMT1P32643 RPP2BYDR382W 333 nt14.23□□□□□ -0.13
TMT1P32643 YGR021WYGR021W 873 nt14.18□□□□□ -0.14
TMT1P32643 NPL3YDR432W 1245 nt14.17□□□□□ -0.14
TMT1P32643 MNP1YGL068W 585 nt14.16□□□□□ -0.14
TMT1P32643 HOM6YJR139C 1080 nt14.16□□□□□ -0.14
TMT1P32643 BSC6YOL137W 1494 nt14.12□□□□□ -0.15
TMT1P32643 BUD23YCR047C 828 nt14.11□□□□□ -0.15
TMT1P32643 NAB2YGL122C 1578 nt14.01□□□□□ -0.17
TMT1P32643 BDH2YAL061W 1254 nt13.98□□□□□ -0.17
TMT1P32643 SSA3YBL075C 1950 nt13.97□□□□□ -0.17
TMT1P32643 YFL021C-AYFL021C-A 855 nt13.96□□□□□ -0.17
TMT1P32643 RKM5YLR137W 1104 nt13.96□□□□□ -0.17
TMT1P32643 YOL037CYOL037C 354 nt13.95□□□□□ -0.18
TMT1P32643 INM2YDR287W 879 nt13.91□□□□□ -0.18
TMT1P32643 FPR4YLR449W 1179 nt13.91□□□□□ -0.18
TMT1P32643 DAL1YIR027C 1383 nt13.87□□□□□ -0.19
TMT1P32643 FIS1YIL065C 468 nt13.83□□□□□ -0.2
TMT1P32643 LSM3YLR438C-A 270 nt13.83□□□□□ -0.2
TMT1P32643 YBL100CYBL100C 315 nt13.83□□□□□ -0.2
TMT1P32643 tM(CAU)CtM(CAU)C 72 nt13.77□□□□□ -0.21
TMT1P32643 IMT4tM(CAU)E 72 nt13.77□□□□□ -0.21
TMT1P32643 IMT3tM(CAU)J3 72 nt13.77□□□□□ -0.21
TMT1P32643 IMT1tM(CAU)O1 72 nt13.77□□□□□ -0.21
TMT1P32643 IMT2tM(CAU)P 72 nt13.77□□□□□ -0.21
TMT1P32643 PHO4YFR034C 939 nt13.75□□□□□ -0.21
TMT1P32643 TRM9YML014W 840 nt13.7□□□□□ -0.22
TMT1P32643 FUN26YAL022C 1554 nt13.68□□□□□ -0.22
TMT1P32643 YLR281CYLR281C 468 nt13.65□□□□□ -0.22
TMT1P32643 PUS2YGL063W 1113 nt13.62□□□□□ -0.23
TMT1P32643 WHI5YOR083W 888 nt13.59□□□□□ -0.23
TMT1P32643 CCT6YDR188W 1641 nt13.53□□□□□ -0.24
TMT1P32643 SPT5YML010W 3192 nt13.46□□□□□ -0.25
TMT1P32643 ALF1YNL148C 765 nt13.44□□□□□ -0.26
TMT1P32643 YLR154C-GYLR154C-G 150 nt13.39□□□□□ -0.27
TMT1P32643 SUF2tP(AGG)C 72 nt13.38□□□□□ -0.27
TMT1P32643 SUF10tP(AGG)N 72 nt13.38□□□□□ -0.27
TMT1P32643 YPS1YLR120C 1710 nt13.38□□□□□ -0.27
TMT1P32643 YDR095CYDR095C 411 nt13.33□□□□□ -0.28
TMT1P32643 YPR011CYPR011C 981 nt13.33□□□□□ -0.28
Retrieved 100 of 7,029 protein–RNA pairs in 7.2 ms