Protein–RNA interactions for Protein: P53330

RTT102, Regulator of Ty1 transposition protein 102, yeastyeast

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RTT102P53330 YML009W-BYML009W-B 477 nt22.47■■□□□ 1.19
RTT102P53330 NSR1YGR159C 1245 nt22.19■■□□□ 1.14
RTT102P53330 NOP1YDL014W 984 nt21.88■■□□□ 1.09
RTT102P53330 YKL036CYKL036C 393 nt20.34■□□□□ 0.85
RTT102P53330 MDJ1YFL016C 1536 nt19.58■□□□□ 0.73
RTT102P53330 Q0297Q0297 156 nt19.21■□□□□ 0.67
RTT102P53330 SRX1YKL086W 384 nt19.13■□□□□ 0.65
RTT102P53330 YJL027CYJL027C 417 nt19.02■□□□□ 0.64
RTT102P53330 SCS3YGL126W 1143 nt18.59■□□□□ 0.57
RTT102P53330 YCR051WYCR051W 669 nt18.17■□□□□ 0.5
RTT102P53330 YOL085CYOL085C 342 nt17.62■□□□□ 0.41
RTT102P53330 DBP2YNL112W 1641 nt17.38■□□□□ 0.37
RTT102P53330 PKP1YIL042C 1185 nt17.35■□□□□ 0.37
RTT102P53330 RPP1BYDL130W 321 nt17.24■□□□□ 0.35
RTT102P53330 TRN1tP(UGG)A 72 nt17.21■□□□□ 0.35
RTT102P53330 SUF9tP(UGG)F 72 nt17.21■□□□□ 0.35
RTT102P53330 SUF8tP(UGG)H 72 nt17.21■□□□□ 0.35
RTT102P53330 tP(UGG)LtP(UGG)L 72 nt17.21■□□□□ 0.35
RTT102P53330 SUF7tP(UGG)M 72 nt17.21■□□□□ 0.35
RTT102P53330 tP(UGG)N1tP(UGG)N1 72 nt17.21■□□□□ 0.35
RTT102P53330 tP(UGG)N2tP(UGG)N2 72 nt17.21■□□□□ 0.35
RTT102P53330 tP(UGG)O1tP(UGG)O1 72 nt17.21■□□□□ 0.35
RTT102P53330 SUF11tP(UGG)O2 72 nt17.21■□□□□ 0.35
RTT102P53330 CCC1YLR220W 969 nt17.06■□□□□ 0.32
RTT102P53330 ATS1YAL020C 1002 nt16.67■□□□□ 0.26
RTT102P53330 YBR190WYBR190W 312 nt16.64■□□□□ 0.25
RTT102P53330 SCJ1YMR214W 1134 nt16.63■□□□□ 0.25
RTT102P53330 PET122YER153C 765 nt16.47■□□□□ 0.23
RTT102P53330 RVS167YDR388W 1449 nt16.36■□□□□ 0.21
RTT102P53330 tP(UGG)O3tP(UGG)O3 72 nt16.34■□□□□ 0.21
RTT102P53330 SCR1SCR1 522 nt16.31■□□□□ 0.2
RTT102P53330 RTC3YHR087W 336 nt16.29■□□□□ 0.2
RTT102P53330 RRN5YLR141W 1092 nt16.01■□□□□ 0.15
RTT102P53330 SHR5YOL110W 714 nt15.83■□□□□ 0.12
RTT102P53330 YDJ1YNL064C 1230 nt15.79■□□□□ 0.12
RTT102P53330 RSB1YOR049C 1065 nt15.72■□□□□ 0.11
RTT102P53330 YER088W-BYER088W-B 147 nt15.69■□□□□ 0.1
RTT102P53330 GAR1YHR089C 618 nt15.43■□□□□ 0.06
RTT102P53330 PST2YDR032C 597 nt15.41■□□□□ 0.06
RTT102P53330 DEP1YAL013W 1218 nt15.36■□□□□ 0.05
RTT102P53330 URN1YPR152C 1398 nt15.31■□□□□ 0.04
RTT102P53330 YNL208WYNL208W 600 nt15.11■□□□□ 0.01
RTT102P53330 RPN10YHR200W 807 nt15.09■□□□□ 0.01
RTT102P53330 OPI9YLR338W 858 nt15.05■□□□□ -0
RTT102P53330 PUT4YOR348C 1884 nt15□□□□□ -0.01
RTT102P53330 SAH1YER043C 1350 nt14.92□□□□□ -0.02
RTT102P53330 TIR1YER011W 765 nt14.91□□□□□ -0.02
RTT102P53330 YKL097CYKL097C 411 nt14.88□□□□□ -0.03
RTT102P53330 ARE1YCR048W 1833 nt14.78□□□□□ -0.04
RTT102P53330 SHU1YHL006C 453 nt14.76□□□□□ -0.05
RTT102P53330 SSA1YAL005C 1929 nt14.7□□□□□ -0.06
RTT102P53330 YJR018WYJR018W 363 nt14.61□□□□□ -0.07
RTT102P53330 PUN1YLR414C 792 nt14.61□□□□□ -0.07
RTT102P53330 YHR049C-AYHR049C-A 297 nt14.59□□□□□ -0.07
RTT102P53330 POA1YBR022W 534 nt14.56□□□□□ -0.08
RTT102P53330 SRB2YHR041C 633 nt14.5□□□□□ -0.09
RTT102P53330 YAL037C-BYAL037C-B 975 nt14.5□□□□□ -0.09
RTT102P53330 YJR120WYJR120W 351 nt14.43□□□□□ -0.1
RTT102P53330 PTC2YER089C 1395 nt14.41□□□□□ -0.1
RTT102P53330 RPP2BYDR382W 333 nt14.34□□□□□ -0.11
RTT102P53330 WWM1YFL010C 636 nt14.29□□□□□ -0.12
RTT102P53330 BUD23YCR047C 828 nt14.27□□□□□ -0.13
RTT102P53330 YOR139CYOR139C 393 nt14.27□□□□□ -0.13
RTT102P53330 YGR021WYGR021W 873 nt14.22□□□□□ -0.13
RTT102P53330 BSC6YOL137W 1494 nt14.2□□□□□ -0.14
RTT102P53330 HOM6YJR139C 1080 nt14.2□□□□□ -0.14
RTT102P53330 NAB2YGL122C 1578 nt14.19□□□□□ -0.14
RTT102P53330 MNP1YGL068W 585 nt14.16□□□□□ -0.14
RTT102P53330 NPL3YDR432W 1245 nt14.1□□□□□ -0.15
RTT102P53330 BDH2YAL061W 1254 nt14.09□□□□□ -0.15
RTT102P53330 INM2YDR287W 879 nt14.06□□□□□ -0.16
RTT102P53330 SSA3YBL075C 1950 nt14.05□□□□□ -0.16
RTT102P53330 YFL021C-AYFL021C-A 855 nt14.04□□□□□ -0.16
RTT102P53330 DAL1YIR027C 1383 nt14.04□□□□□ -0.16
RTT102P53330 FPR4YLR449W 1179 nt14.02□□□□□ -0.17
RTT102P53330 FIS1YIL065C 468 nt14.01□□□□□ -0.17
RTT102P53330 RKM5YLR137W 1104 nt13.99□□□□□ -0.17
RTT102P53330 YBL100CYBL100C 315 nt13.96□□□□□ -0.17
RTT102P53330 YOL037CYOL037C 354 nt13.96□□□□□ -0.17
RTT102P53330 LSM3YLR438C-A 270 nt13.93□□□□□ -0.18
RTT102P53330 PHO4YFR034C 939 nt13.91□□□□□ -0.18
RTT102P53330 FUN26YAL022C 1554 nt13.8□□□□□ -0.2
RTT102P53330 TRM9YML014W 840 nt13.8□□□□□ -0.2
RTT102P53330 tM(CAU)CtM(CAU)C 72 nt13.71□□□□□ -0.21
RTT102P53330 IMT4tM(CAU)E 72 nt13.71□□□□□ -0.21
RTT102P53330 IMT3tM(CAU)J3 72 nt13.71□□□□□ -0.21
RTT102P53330 IMT1tM(CAU)O1 72 nt13.71□□□□□ -0.21
RTT102P53330 IMT2tM(CAU)P 72 nt13.71□□□□□ -0.21
RTT102P53330 CCT6YDR188W 1641 nt13.64□□□□□ -0.23
RTT102P53330 YLR281CYLR281C 468 nt13.63□□□□□ -0.23
RTT102P53330 WHI5YOR083W 888 nt13.58□□□□□ -0.24
RTT102P53330 YPS1YLR120C 1710 nt13.58□□□□□ -0.24
RTT102P53330 PUS2YGL063W 1113 nt13.57□□□□□ -0.24
RTT102P53330 ALF1YNL148C 765 nt13.57□□□□□ -0.24
RTT102P53330 YDR095CYDR095C 411 nt13.52□□□□□ -0.25
RTT102P53330 SUF2tP(AGG)C 72 nt13.51□□□□□ -0.25
RTT102P53330 SUF10tP(AGG)N 72 nt13.51□□□□□ -0.25
RTT102P53330 YLR154C-GYLR154C-G 150 nt13.44□□□□□ -0.26
RTT102P53330 YHR165W-AYHR165W-A 312 nt13.43□□□□□ -0.26
RTT102P53330 SPT5YML010W 3192 nt13.38□□□□□ -0.27
Retrieved 100 of 7,029 protein–RNA pairs in 12.8 ms