Protein–RNA interactions for Protein: Q04226

TAF11, Transcription initiation factor TFIID subunit 11, yeastyeast

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TAF11Q04226 NSR1YGR159C 1245 nt20.39■□□□□ 0.85
TAF11Q04226 YML009W-BYML009W-B 477 nt20.3■□□□□ 0.84
TAF11Q04226 NOP1YDL014W 984 nt19.64■□□□□ 0.73
TAF11Q04226 MDJ1YFL016C 1536 nt18.33■□□□□ 0.53
TAF11Q04226 YKL036CYKL036C 393 nt17.86■□□□□ 0.45
TAF11Q04226 SRX1YKL086W 384 nt17.14■□□□□ 0.33
TAF11Q04226 Q0297Q0297 156 nt17.08■□□□□ 0.32
TAF11Q04226 YJL027CYJL027C 417 nt16.94■□□□□ 0.3
TAF11Q04226 YCR051WYCR051W 669 nt16.25■□□□□ 0.19
TAF11Q04226 DBP2YNL112W 1641 nt16.09■□□□□ 0.17
TAF11Q04226 SCS3YGL126W 1143 nt16.09■□□□□ 0.17
TAF11Q04226 YBR190WYBR190W 312 nt15.73■□□□□ 0.11
TAF11Q04226 TRN1tP(UGG)A 72 nt15.64■□□□□ 0.09
TAF11Q04226 SUF9tP(UGG)F 72 nt15.64■□□□□ 0.09
TAF11Q04226 SUF8tP(UGG)H 72 nt15.64■□□□□ 0.09
TAF11Q04226 tP(UGG)LtP(UGG)L 72 nt15.64■□□□□ 0.09
TAF11Q04226 SUF7tP(UGG)M 72 nt15.64■□□□□ 0.09
TAF11Q04226 tP(UGG)N1tP(UGG)N1 72 nt15.64■□□□□ 0.09
TAF11Q04226 tP(UGG)N2tP(UGG)N2 72 nt15.64■□□□□ 0.09
TAF11Q04226 tP(UGG)O1tP(UGG)O1 72 nt15.64■□□□□ 0.09
TAF11Q04226 SUF11tP(UGG)O2 72 nt15.64■□□□□ 0.09
TAF11Q04226 CCC1YLR220W 969 nt15.49■□□□□ 0.07
TAF11Q04226 YOL085CYOL085C 342 nt15.45■□□□□ 0.06
TAF11Q04226 RTC3YHR087W 336 nt15.38■□□□□ 0.05
TAF11Q04226 RPP1BYDL130W 321 nt15.33■□□□□ 0.04
TAF11Q04226 PKP1YIL042C 1185 nt15.25■□□□□ 0.03
TAF11Q04226 RVS167YDR388W 1449 nt15.15■□□□□ 0.02
TAF11Q04226 SCJ1YMR214W 1134 nt14.96□□□□□ -0.01
TAF11Q04226 tP(UGG)O3tP(UGG)O3 72 nt14.71□□□□□ -0.05
TAF11Q04226 PET122YER153C 765 nt14.66□□□□□ -0.06
TAF11Q04226 SHR5YOL110W 714 nt14.53□□□□□ -0.08
TAF11Q04226 SCR1SCR1 522 nt14.47□□□□□ -0.09
TAF11Q04226 PUT4YOR348C 1884 nt14.45□□□□□ -0.1
TAF11Q04226 ATS1YAL020C 1002 nt14.32□□□□□ -0.12
TAF11Q04226 URN1YPR152C 1398 nt14.28□□□□□ -0.12
TAF11Q04226 YDJ1YNL064C 1230 nt14.25□□□□□ -0.13
TAF11Q04226 RRN5YLR141W 1092 nt14.21□□□□□ -0.13
TAF11Q04226 DEP1YAL013W 1218 nt14.19□□□□□ -0.14
TAF11Q04226 OPI9YLR338W 858 nt14.14□□□□□ -0.15
TAF11Q04226 ARE1YCR048W 1833 nt14.11□□□□□ -0.15
TAF11Q04226 SAH1YER043C 1350 nt14.09□□□□□ -0.15
TAF11Q04226 SSA3YBL075C 1950 nt14.07□□□□□ -0.16
TAF11Q04226 RPN10YHR200W 807 nt14.05□□□□□ -0.16
TAF11Q04226 POA1YBR022W 534 nt13.99□□□□□ -0.17
TAF11Q04226 YHR049C-AYHR049C-A 297 nt13.96□□□□□ -0.17
TAF11Q04226 GAR1YHR089C 618 nt13.96□□□□□ -0.17
TAF11Q04226 YNL208WYNL208W 600 nt13.96□□□□□ -0.17
TAF11Q04226 YER088W-BYER088W-B 147 nt13.92□□□□□ -0.18
TAF11Q04226 RSB1YOR049C 1065 nt13.87□□□□□ -0.19
TAF11Q04226 PUN1YLR414C 792 nt13.74□□□□□ -0.21
TAF11Q04226 BSC6YOL137W 1494 nt13.74□□□□□ -0.21
TAF11Q04226 BUD23YCR047C 828 nt13.63□□□□□ -0.23
TAF11Q04226 YJR018WYJR018W 363 nt13.62□□□□□ -0.23
TAF11Q04226 PTC2YER089C 1395 nt13.59□□□□□ -0.23
TAF11Q04226 TIR1YER011W 765 nt13.51□□□□□ -0.25
TAF11Q04226 NAB2YGL122C 1578 nt13.46□□□□□ -0.25
TAF11Q04226 SSA1YAL005C 1929 nt13.38□□□□□ -0.27
TAF11Q04226 YJR120WYJR120W 351 nt13.31□□□□□ -0.28
TAF11Q04226 PST2YDR032C 597 nt13.3□□□□□ -0.28
TAF11Q04226 RPP2BYDR382W 333 nt13.3□□□□□ -0.28
TAF11Q04226 Q0182Q0182 405 nt13.26□□□□□ -0.29
TAF11Q04226 DAL1YIR027C 1383 nt13.23□□□□□ -0.29
TAF11Q04226 FIS1YIL065C 468 nt13.22□□□□□ -0.29
TAF11Q04226 SPT5YML010W 3192 nt13.21□□□□□ -0.29
TAF11Q04226 FPR4YLR449W 1179 nt13.2□□□□□ -0.3
TAF11Q04226 INM2YDR287W 879 nt13.18□□□□□ -0.3
TAF11Q04226 PHO4YFR034C 939 nt13.1□□□□□ -0.31
TAF11Q04226 SRB2YHR041C 633 nt13.07□□□□□ -0.32
TAF11Q04226 YBL100CYBL100C 315 nt13□□□□□ -0.33
TAF11Q04226 BDH2YAL061W 1254 nt12.96□□□□□ -0.33
TAF11Q04226 YPS1YLR120C 1710 nt12.93□□□□□ -0.34
TAF11Q04226 MEP2YNL142W 1500 nt12.93□□□□□ -0.34
TAF11Q04226 SSA4YER103W 1929 nt12.9□□□□□ -0.34
TAF11Q04226 WWM1YFL010C 636 nt12.86□□□□□ -0.35
TAF11Q04226 YHR165W-AYHR165W-A 312 nt12.83□□□□□ -0.36
TAF11Q04226 FUN26YAL022C 1554 nt12.82□□□□□ -0.36
TAF11Q04226 YDR095CYDR095C 411 nt12.82□□□□□ -0.36
TAF11Q04226 SHU1YHL006C 453 nt12.82□□□□□ -0.36
TAF11Q04226 TRM9YML014W 840 nt12.77□□□□□ -0.37
TAF11Q04226 LSM3YLR438C-A 270 nt12.75□□□□□ -0.37
TAF11Q04226 YGR021WYGR021W 873 nt12.74□□□□□ -0.37
TAF11Q04226 ALF1YNL148C 765 nt12.73□□□□□ -0.37
TAF11Q04226 YAL037C-BYAL037C-B 975 nt12.71□□□□□ -0.37
TAF11Q04226 DCW1YKL046C 1350 nt12.69□□□□□ -0.38
TAF11Q04226 YFL021C-AYFL021C-A 855 nt12.68□□□□□ -0.38
TAF11Q04226 YKL097CYKL097C 411 nt12.66□□□□□ -0.38
TAF11Q04226 HOM6YJR139C 1080 nt12.65□□□□□ -0.38
TAF11Q04226 CCT6YDR188W 1641 nt12.64□□□□□ -0.39
TAF11Q04226 SUF2tP(AGG)C 72 nt12.59□□□□□ -0.39
TAF11Q04226 SUF10tP(AGG)N 72 nt12.59□□□□□ -0.39
TAF11Q04226 RPP2AYOL039W 321 nt12.58□□□□□ -0.4
TAF11Q04226 MOT3YMR070W 1473 nt12.58□□□□□ -0.4
TAF11Q04226 EMI2YDR516C 1503 nt12.56□□□□□ -0.4
TAF11Q04226 MNP1YGL068W 585 nt12.55□□□□□ -0.4
TAF11Q04226 YMR090WYMR090W 684 nt12.53□□□□□ -0.4
TAF11Q04226 PTP1YDL230W 1008 nt12.52□□□□□ -0.41
TAF11Q04226 SIS1YNL007C 1059 nt12.51□□□□□ -0.41
TAF11Q04226 RKM5YLR137W 1104 nt12.47□□□□□ -0.41
TAF11Q04226 CAC2YML102W 1407 nt12.46□□□□□ -0.41
TAF11Q04226 YDL221WYDL221W 552 nt12.44□□□□□ -0.42
Retrieved 100 of 7,029 protein–RNA pairs in 13 ms