RNA–Protein interactions for RNA: YIL061C

SNP1, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNP1, Length 903 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNP1YIL061C YBR241CP38142 488 aa7.51□□□□□ -1.21
SNP1YIL061C SLM4P38247 162 aa7.51□□□□□ -1.21
SNP1YIL061C TDP1P38319 544 aa7.51□□□□□ -1.21
SNP1YIL061C YHR020WP38708 688 aaKnown RBP7.51□□□□□ -1.21
SNP1YIL061C RIX1P38883 763 aaPredicted RBP7.51□□□□□ -1.21
SNP1YIL061C BEM4P39011 633 aa7.51□□□□□ -1.21
SNP1YIL061C ARB1P40024 610 aaKnown RBP7.51□□□□□ -1.21
SNP1YIL061C EMP65P40085 556 aa7.51□□□□□ -1.21
SNP1YIL061C MOB1P40484 314 aa7.51□□□□□ -1.21
SNP1YIL061C SNL1P40548 159 aa7.51□□□□□ -1.21
SNP1YIL061C FMP32P43557 207 aa7.51□□□□□ -1.21
SNP1YIL061C STB2P46679 850 aa7.51□□□□□ -1.21
SNP1YIL061C DAN4P47179 1161 aa7.51□□□□□ -1.21
SNP1YIL061C VMA10P48836 114 aaKnown RBP7.51□□□□□ -1.21
SNP1YIL061C YGL108CP53139 140 aa7.51□□□□□ -1.21
SNP1YIL061C GPI1P53306 609 aa7.51□□□□□ -1.21
SNP1YIL061C ASI2P53895 289 aa7.51□□□□□ -1.21
SNP1YIL061C VAC7P53950 1165 aa7.51□□□□□ -1.21
SNP1YIL061C ECM11Q04110 302 aa7.51□□□□□ -1.21
SNP1YIL061C YVC1Q12324 675 aa7.51□□□□□ -1.21
SNP1YIL061C BCY1P07278 416 aaKnown RBP7.5□□□□□ -1.21
SNP1YIL061C YAR066WP0CX18 203 aa7.5□□□□□ -1.21
SNP1YIL061C YHR214WP0CX19 203 aa7.5□□□□□ -1.21
SNP1YIL061C RPS4AP0CX35 261 aaKnown RBP7.5□□□□□ -1.21
SNP1YIL061C RPS4BP0CX36 261 aaKnown RBP7.5□□□□□ -1.21
SNP1YIL061C TOP3P13099 656 aa7.5□□□□□ -1.21
SNP1YIL061C MSB1P21339 1137 aaKnown RBP7.5□□□□□ -1.21
SNP1YIL061C RVS161P25343 265 aaKnown RBP7.5□□□□□ -1.21
SNP1YIL061C CRM1P30822 1084 aaKnown RBP7.5□□□□□ -1.21
SNP1YIL061C FUN30P31380 1131 aa7.5□□□□□ -1.21
SNP1YIL061C BCK2P33306 851 aa7.5□□□□□ -1.21
SNP1YIL061C MRP8P35719 219 aa7.5□□□□□ -1.21
SNP1YIL061C SKG1P36169 355 aa7.5□□□□□ -1.21
SNP1YIL061C DBP8P38719 431 aa7.5□□□□□ -1.21
SNP1YIL061C AYR1P40471 297 aa7.5□□□□□ -1.21
SNP1YIL061C IRR1P40541 1150 aa7.5□□□□□ -1.21
SNP1YIL061C ERG10P41338 398 aaKnown RBP7.5□□□□□ -1.21
SNP1YIL061C VEL1P53058 206 aa7.5□□□□□ -1.21
SNP1YIL061C FLC3P53121 802 aa7.5□□□□□ -1.21
SNP1YIL061C SVL3Q03088 825 aaKnown RBP7.5□□□□□ -1.21
SNP1YIL061C PPN1Q04119 674 aa7.5□□□□□ -1.21
SNP1YIL061C TMN2Q04562 672 aa7.5□□□□□ -1.21
SNP1YIL061C BCH1Q05029 724 aa7.5□□□□□ -1.21
SNP1YIL061C HBT1Q07653 1046 aaKnown RBP7.5□□□□□ -1.21
SNP1YIL061C YOL159CQ08300 171 aa7.5□□□□□ -1.21
SNP1YIL061C RSB1Q08417 382 aa7.5□□□□□ -1.21
SNP1YIL061C SLF1Q12034 447 aaKnown RBP7.5□□□□□ -1.21
SNP1YIL061C IOC2Q12072 812 aa7.5□□□□□ -1.21
SNP1YIL061C SEM1O94742 89 aa7.49□□□□□ -1.21
SNP1YIL061C MRP13P12686 339 aa7.49□□□□□ -1.21
SNP1YIL061C ATR1P13090 542 aa7.49□□□□□ -1.21
SNP1YIL061C RSR1P13856 272 aa7.49□□□□□ -1.21
SNP1YIL061C MSS116P15424 664 aaKnown RBP7.49□□□□□ -1.21
SNP1YIL061C MET8P15807 274 aa7.49□□□□□ -1.21
SNP1YIL061C SIR1P21691 654 aa7.49□□□□□ -1.21
SNP1YIL061C SPB1P25582 841 aaPredicted RBP7.49□□□□□ -1.21
SNP1YIL061C NGG1P32494 702 aa7.49□□□□□ -1.21
SNP1YIL061C UGP1P32861 499 aaKnown RBP7.49□□□□□ -1.21
SNP1YIL061C PEX6P33760 1030 aa7.49□□□□□ -1.21
SNP1YIL061C RMA1P36001 430 aaKnown RBP7.49□□□□□ -1.21
SNP1YIL061C YPT52P36018 234 aaKnown RBP7.49□□□□□ -1.21
SNP1YIL061C MRPL17P36528 281 aa7.49□□□□□ -1.21
SNP1YIL061C PCL5P38794 229 aa7.49□□□□□ -1.21
SNP1YIL061C LRP1P38801 184 aaKnown RBP7.49□□□□□ -1.21
SNP1YIL061C UBA4P38820 440 aa7.49□□□□□ -1.21
SNP1YIL061C FAD1P38913 306 aa7.49□□□□□ -1.21
SNP1YIL061C SSN3P39073 555 aa7.49□□□□□ -1.21
SNP1YIL061C FAA2P39518 744 aa7.49□□□□□ -1.21
SNP1YIL061C DOT6P40059 670 aaKnown RBP7.49□□□□□ -1.21
SNP1YIL061C VHR1P40522 640 aa7.49□□□□□ -1.21
SNP1YIL061C AGP3P43548 558 aa7.49□□□□□ -1.21
SNP1YIL061C RMD8P43620 662 aa7.49□□□□□ -1.21
SNP1YIL061C NUP85P46673 744 aa7.49□□□□□ -1.21
SNP1YIL061C GTO1P48239 356 aa7.49□□□□□ -1.21
SNP1YIL061C YPT32P51996 222 aaKnown RBP7.49□□□□□ -1.21
SNP1YIL061C PYK2P52489 506 aaKnown RBP7.49□□□□□ -1.21
SNP1YIL061C EMC4P53073 190 aa7.49□□□□□ -1.21
SNP1YIL061C RAD34Q06665 692 aa7.49□□□□□ -1.21
SNP1YIL061C FLC1Q08967 793 aa7.49□□□□□ -1.21
SNP1YIL061C SMF3Q12078 473 aaPredicted RBP7.49□□□□□ -1.21
SNP1YIL061C GET4Q12125 312 aa7.49□□□□□ -1.21
SNP1YIL061C YOR342CQ12182 319 aa7.49□□□□□ -1.21
SNP1YIL061C CDC21P06785 304 aa7.48□□□□□ -1.21
SNP1YIL061C RAP1P11938 827 aa7.48□□□□□ -1.21
SNP1YIL061C SNF4P12904 322 aa7.48□□□□□ -1.21
SNP1YIL061C SEC63P14906 663 aa7.48□□□□□ -1.21
SNP1YIL061C YJU3P28321 313 aa7.48□□□□□ -1.21
SNP1YIL061C VPH2P32341 215 aa7.48□□□□□ -1.21
SNP1YIL061C CBF5P33322 483 aaKnown RBP RIP-Chip data7.48□□□□□ -1.21not detected
SNP1YIL061C PXA2P34230 853 aa7.48□□□□□ -1.21
SNP1YIL061C TDA11P38854 504 aa7.48□□□□□ -1.21
SNP1YIL061C PDS1P40316 373 aaPredicted RBP7.48□□□□□ -1.21
SNP1YIL061C REF2P42073 533 aaPredicted RBP7.48□□□□□ -1.21
SNP1YIL061C YGL176CP46945 554 aa7.48□□□□□ -1.21
SNP1YIL061C SDH1Q00711 640 aa7.48□□□□□ -1.21
SNP1YIL061C SKI8Q02793 397 aaPredicted RBP7.48□□□□□ -1.21
SNP1YIL061C YMR178WQ03219 274 aaKnown RBP7.48□□□□□ -1.21
SNP1YIL061C EFR3Q03653 782 aaKnown RBP7.48□□□□□ -1.21
SNP1YIL061C CCE1Q03702 353 aa7.48□□□□□ -1.21
SNP1YIL061C VHS1Q03785 461 aa7.48□□□□□ -1.21
Retrieved 100 of 5,963 RNA–protein pairs in 26.7 ms